Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:046:074
Extra
PDB:
ATOM 1 O3' U A 45 55.508 165.455 36.040 1.00 48.91 O
ATOM 2 P G A 46 54.516 166.392 36.884 1.00 50.06 P
ATOM 3 OP1 G A 46 54.184 167.570 36.045 1.00 50.06 O
ATOM 4 OP2 G A 46 55.089 166.597 38.233 1.00 50.20 O
ATOM 5 O5' G A 46 53.192 165.522 37.006 1.00 50.55 O
ATOM 6 C5' G A 46 52.491 165.118 35.829 1.00 49.74 C
ATOM 7 C4' G A 46 51.008 165.211 36.049 1.00 50.26 C
ATOM 8 O4' G A 46 50.584 164.113 36.896 1.00 52.20 O
ATOM 9 C3' G A 46 50.492 166.484 36.708 1.00 50.28 C
ATOM 10 O3' G A 46 49.227 166.793 36.137 1.00 52.60 O
ATOM 11 C2' G A 46 50.307 166.050 38.160 1.00 49.11 C
ATOM 12 O2' G A 46 49.318 166.791 38.836 1.00 47.14 O
ATOM 13 C1' G A 46 49.826 164.615 37.973 1.00 51.43 C
ATOM 14 N9 G A 46 49.975 163.702 39.105 1.00 54.04 N
ATOM 15 C8 G A 46 50.684 163.901 40.270 1.00 54.42 C
ATOM 16 N7 G A 46 50.614 162.889 41.092 1.00 53.77 N
ATOM 17 C5 G A 46 49.815 161.963 40.432 1.00 54.26 C
ATOM 18 C6 G A 46 49.387 160.673 40.827 1.00 53.59 C
ATOM 19 O6 G A 46 49.638 160.066 41.871 1.00 54.02 O
ATOM 20 N1 G A 46 48.586 160.080 39.856 1.00 54.66 N
ATOM 21 C2 G A 46 48.245 160.649 38.656 1.00 54.30 C
ATOM 22 N2 G A 46 47.472 159.911 37.851 1.00 53.24 N
ATOM 23 N3 G A 46 48.636 161.850 38.274 1.00 54.41 N
ATOM 24 C4 G A 46 49.413 162.448 39.205 1.00 54.31 C
ATOM 25 P C A 47 48.998 168.215 35.426 1.00 52.45 P
ATOM 26 OP1 C A 47 47.709 168.165 34.687 1.00 52.89 O
ATOM 27 OP2 C A 47 50.247 168.551 34.703 1.00 51.89 O
ATOM 28 O5' C A 47 48.822 169.229 36.638 1.00 51.76 O
TER
ATOM 1 O3' C B 73 41.834 160.513 34.504 1.00 47.70 O
ATOM 2 P G B 74 41.630 160.087 36.043 1.00 48.03 P
ATOM 3 OP1 G B 74 40.198 160.216 36.425 1.00 46.49 O
ATOM 4 OP2 G B 74 42.661 160.824 36.815 1.00 48.78 O
ATOM 5 O5' G B 74 42.008 158.540 36.056 1.00 47.37 O
ATOM 6 C5' G B 74 41.345 157.602 35.185 1.00 47.59 C
ATOM 7 C4' G B 74 41.669 156.185 35.596 1.00 47.86 C
ATOM 8 O4' G B 74 43.097 155.952 35.468 1.00 48.68 O
ATOM 9 C3' G B 74 41.368 155.856 37.044 1.00 48.48 C
ATOM 10 O3' G B 74 40.008 155.506 37.212 1.00 50.20 O
ATOM 11 C2' G B 74 42.301 154.690 37.306 1.00 49.17 C
ATOM 12 O2' G B 74 41.805 153.505 36.729 1.00 52.20 O
ATOM 13 C1' G B 74 43.546 155.128 36.532 1.00 49.77 C
ATOM 14 N9 G B 74 44.495 155.896 37.341 1.00 50.39 N
ATOM 15 C8 G B 74 44.832 157.221 37.188 1.00 50.74 C
ATOM 16 N7 G B 74 45.692 157.639 38.076 1.00 50.14 N
ATOM 17 C5 G B 74 45.946 156.525 38.860 1.00 50.79 C
ATOM 18 C6 G B 74 46.790 156.371 39.984 1.00 50.86 C
ATOM 19 O6 G B 74 47.519 157.210 40.522 1.00 51.60 O
ATOM 20 N1 G B 74 46.737 155.079 40.487 1.00 49.92 N
ATOM 21 C2 G B 74 45.981 154.062 39.972 1.00 48.22 C
ATOM 22 N2 G B 74 46.070 152.890 40.604 1.00 48.62 N
ATOM 23 N3 G B 74 45.196 154.186 38.919 1.00 49.76 N
ATOM 24 C4 G B 74 45.222 155.438 38.418 1.00 50.31 C
ATOM 25 P C B 75 39.273 155.828 38.602 1.00 53.92 P
ATOM 26 OP1 C B 75 37.861 155.391 38.465 1.00 54.81 O
ATOM 27 OP2 C B 75 39.567 157.224 39.010 1.00 52.64 O
ATOM 28 O5' C B 75 39.987 154.849 39.628 1.00 55.25 O
TER
ATOM 2 P G A 46 54.516 166.392 36.884 1.00 50.06 P
ATOM 3 OP1 G A 46 54.184 167.570 36.045 1.00 50.06 O
ATOM 4 OP2 G A 46 55.089 166.597 38.233 1.00 50.20 O
ATOM 5 O5' G A 46 53.192 165.522 37.006 1.00 50.55 O
ATOM 6 C5' G A 46 52.491 165.118 35.829 1.00 49.74 C
ATOM 7 C4' G A 46 51.008 165.211 36.049 1.00 50.26 C
ATOM 8 O4' G A 46 50.584 164.113 36.896 1.00 52.20 O
ATOM 9 C3' G A 46 50.492 166.484 36.708 1.00 50.28 C
ATOM 10 O3' G A 46 49.227 166.793 36.137 1.00 52.60 O
ATOM 11 C2' G A 46 50.307 166.050 38.160 1.00 49.11 C
ATOM 12 O2' G A 46 49.318 166.791 38.836 1.00 47.14 O
ATOM 13 C1' G A 46 49.826 164.615 37.973 1.00 51.43 C
ATOM 14 N9 G A 46 49.975 163.702 39.105 1.00 54.04 N
ATOM 15 C8 G A 46 50.684 163.901 40.270 1.00 54.42 C
ATOM 16 N7 G A 46 50.614 162.889 41.092 1.00 53.77 N
ATOM 17 C5 G A 46 49.815 161.963 40.432 1.00 54.26 C
ATOM 18 C6 G A 46 49.387 160.673 40.827 1.00 53.59 C
ATOM 19 O6 G A 46 49.638 160.066 41.871 1.00 54.02 O
ATOM 20 N1 G A 46 48.586 160.080 39.856 1.00 54.66 N
ATOM 21 C2 G A 46 48.245 160.649 38.656 1.00 54.30 C
ATOM 22 N2 G A 46 47.472 159.911 37.851 1.00 53.24 N
ATOM 23 N3 G A 46 48.636 161.850 38.274 1.00 54.41 N
ATOM 24 C4 G A 46 49.413 162.448 39.205 1.00 54.31 C
ATOM 25 P C A 47 48.998 168.215 35.426 1.00 52.45 P
ATOM 26 OP1 C A 47 47.709 168.165 34.687 1.00 52.89 O
ATOM 27 OP2 C A 47 50.247 168.551 34.703 1.00 51.89 O
ATOM 28 O5' C A 47 48.822 169.229 36.638 1.00 51.76 O
TER
ATOM 1 O3' C B 73 41.834 160.513 34.504 1.00 47.70 O
ATOM 2 P G B 74 41.630 160.087 36.043 1.00 48.03 P
ATOM 3 OP1 G B 74 40.198 160.216 36.425 1.00 46.49 O
ATOM 4 OP2 G B 74 42.661 160.824 36.815 1.00 48.78 O
ATOM 5 O5' G B 74 42.008 158.540 36.056 1.00 47.37 O
ATOM 6 C5' G B 74 41.345 157.602 35.185 1.00 47.59 C
ATOM 7 C4' G B 74 41.669 156.185 35.596 1.00 47.86 C
ATOM 8 O4' G B 74 43.097 155.952 35.468 1.00 48.68 O
ATOM 9 C3' G B 74 41.368 155.856 37.044 1.00 48.48 C
ATOM 10 O3' G B 74 40.008 155.506 37.212 1.00 50.20 O
ATOM 11 C2' G B 74 42.301 154.690 37.306 1.00 49.17 C
ATOM 12 O2' G B 74 41.805 153.505 36.729 1.00 52.20 O
ATOM 13 C1' G B 74 43.546 155.128 36.532 1.00 49.77 C
ATOM 14 N9 G B 74 44.495 155.896 37.341 1.00 50.39 N
ATOM 15 C8 G B 74 44.832 157.221 37.188 1.00 50.74 C
ATOM 16 N7 G B 74 45.692 157.639 38.076 1.00 50.14 N
ATOM 17 C5 G B 74 45.946 156.525 38.860 1.00 50.79 C
ATOM 18 C6 G B 74 46.790 156.371 39.984 1.00 50.86 C
ATOM 19 O6 G B 74 47.519 157.210 40.522 1.00 51.60 O
ATOM 20 N1 G B 74 46.737 155.079 40.487 1.00 49.92 N
ATOM 21 C2 G B 74 45.981 154.062 39.972 1.00 48.22 C
ATOM 22 N2 G B 74 46.070 152.890 40.604 1.00 48.62 N
ATOM 23 N3 G B 74 45.196 154.186 38.919 1.00 49.76 N
ATOM 24 C4 G B 74 45.222 155.438 38.418 1.00 50.31 C
ATOM 25 P C B 75 39.273 155.828 38.602 1.00 53.92 P
ATOM 26 OP1 C B 75 37.861 155.391 38.465 1.00 54.81 O
ATOM 27 OP2 C B 75 39.567 157.224 39.010 1.00 52.64 O
ATOM 28 O5' C B 75 39.987 154.849 39.628 1.00 55.25 O
TER
Atoms:
OP1: (54.184,167.570,36.045)
OP2: (55.089,166.597,38.233)
C3': (50.492,166.484,36.708)
C1': (49.826,164.615,37.973)
C5': (52.491,165.118,35.829)
O6: (49.638,160.066,41.871)
O4': (50.584,164.113,36.896)
C8: (50.684,163.901,40.270)
C2: (48.245,160.649,38.656)
C6: (49.387,160.673,40.827)
C5: (49.815,161.963,40.432)
C4: (49.413,162.448,39.205)
P: (54.516,166.392,36.884)
C4': (51.008,165.211,36.049)
C2': (50.307,166.050,38.160)
O2': (49.318,166.791,38.836)
N1: (48.586,160.080,39.856)
N2: (47.472,159.911,37.851)
N3: (48.636,161.850,38.274)
N7: (50.614,162.889,41.092)
N9: (49.975,163.702,39.105)
O5': (53.192,165.522,37.006)
O3': (49.227,166.793,36.137)
OP2: (55.089,166.597,38.233)
C3': (50.492,166.484,36.708)
C1': (49.826,164.615,37.973)
C5': (52.491,165.118,35.829)
O6: (49.638,160.066,41.871)
O4': (50.584,164.113,36.896)
C8: (50.684,163.901,40.270)
C2: (48.245,160.649,38.656)
C6: (49.387,160.673,40.827)
C5: (49.815,161.963,40.432)
C4: (49.413,162.448,39.205)
P: (54.516,166.392,36.884)
C4': (51.008,165.211,36.049)
C2': (50.307,166.050,38.160)
O2': (49.318,166.791,38.836)
N1: (48.586,160.080,39.856)
N2: (47.472,159.911,37.851)
N3: (48.636,161.850,38.274)
N7: (50.614,162.889,41.092)
N9: (49.975,163.702,39.105)
O5': (53.192,165.522,37.006)
O3': (49.227,166.793,36.137)
OP1: (40.198,160.216,36.425)
OP2: (42.661,160.824,36.815)
C3': (41.368,155.856,37.044)
C1': (43.546,155.128,36.532)
C5': (41.345,157.602,35.185)
O6: (47.519,157.210,40.522)
O4': (43.097,155.952,35.468)
C8: (44.832,157.221,37.188)
C2: (45.981,154.062,39.972)
C6: (46.790,156.371,39.984)
C5: (45.946,156.525,38.860)
C4: (45.222,155.438,38.418)
P: (41.630,160.087,36.043)
C4': (41.669,156.185,35.596)
C2': (42.301,154.690,37.306)
O2': (41.805,153.505,36.729)
N1: (46.737,155.079,40.487)
N2: (46.070,152.890,40.604)
N3: (45.196,154.186,38.919)
N7: (45.692,157.639,38.076)
N9: (44.495,155.896,37.341)
O5': (42.008,158.540,36.056)
O3': (40.008,155.506,37.212)
OP2: (42.661,160.824,36.815)
C3': (41.368,155.856,37.044)
C1': (43.546,155.128,36.532)
C5': (41.345,157.602,35.185)
O6: (47.519,157.210,40.522)
O4': (43.097,155.952,35.468)
C8: (44.832,157.221,37.188)
C2: (45.981,154.062,39.972)
C6: (46.790,156.371,39.984)
C5: (45.946,156.525,38.860)
C4: (45.222,155.438,38.418)
P: (41.630,160.087,36.043)
C4': (41.669,156.185,35.596)
C2': (42.301,154.690,37.306)
O2': (41.805,153.505,36.729)
N1: (46.737,155.079,40.487)
N2: (46.070,152.890,40.604)
N3: (45.196,154.186,38.919)
N7: (45.692,157.639,38.076)
N9: (44.495,155.896,37.341)
O5': (42.008,158.540,36.056)
O3': (40.008,155.506,37.212)
Image (generated by PyMOL):