Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0731:0690
Extra
PDB:
ATOM 1 O3' G A 730 42.592 67.772 47.542 1.00 44.24 O
ATOM 2 P G A 731 41.176 67.512 48.256 1.00 45.27 P
ATOM 3 OP1 G A 731 40.275 68.655 47.946 1.00 45.54 O
ATOM 4 OP2 G A 731 41.405 67.129 49.668 1.00 44.89 O
ATOM 5 O5' G A 731 40.611 66.225 47.511 1.00 49.22 O
ATOM 6 C5' G A 731 40.387 66.214 46.087 1.00 49.09 C
ATOM 7 C4' G A 731 39.060 65.557 45.775 1.00 49.58 C
ATOM 8 O4' G A 731 39.041 64.212 46.323 1.00 51.70 O
ATOM 9 C3' G A 731 37.844 66.218 46.398 1.00 48.93 C
ATOM 10 O3' G A 731 37.398 67.295 45.596 1.00 46.37 O
ATOM 11 C2' G A 731 36.830 65.084 46.429 1.00 50.42 C
ATOM 12 O2' G A 731 36.222 64.872 45.172 1.00 51.44 O
ATOM 13 C1' G A 731 37.727 63.889 46.757 1.00 52.55 C
ATOM 14 N9 G A 731 37.786 63.547 48.175 1.00 53.83 N
ATOM 15 C8 G A 731 37.716 64.408 49.244 1.00 54.33 C
ATOM 16 N7 G A 731 37.839 63.807 50.395 1.00 55.54 N
ATOM 17 C5 G A 731 37.992 62.467 50.069 1.00 54.56 C
ATOM 18 C6 G A 731 38.179 61.337 50.903 1.00 54.22 C
ATOM 19 O6 G A 731 38.254 61.293 52.133 1.00 54.62 O
ATOM 20 N1 G A 731 38.284 60.167 50.161 1.00 55.25 N
ATOM 21 C2 G A 731 38.219 60.090 48.792 1.00 54.96 C
ATOM 22 N2 G A 731 38.339 58.864 48.264 1.00 53.29 N
ATOM 23 N3 G A 731 38.049 61.138 48.001 1.00 54.23 N
ATOM 24 C4 G A 731 37.946 62.287 48.703 1.00 54.54 C
ATOM 25 P G A 732 36.244 68.261 46.140 1.00 47.21 P
ATOM 26 OP1 G A 732 36.536 68.535 47.574 1.00 46.48 O
ATOM 27 OP2 G A 732 34.928 67.691 45.767 1.00 47.92 O
ATOM 28 O5' G A 732 36.469 69.588 45.289 1.00 48.50 O
TER
ATOM 1 O3' U B 689 34.694 56.171 45.610 1.00 64.55 O
ATOM 2 P G B 690 34.189 54.731 45.122 1.00 65.01 P
ATOM 3 OP1 G B 690 35.142 54.277 44.073 1.00 62.92 O
ATOM 4 OP2 G B 690 32.734 54.797 44.818 1.00 64.01 O
ATOM 5 O5' G B 690 34.389 53.851 46.434 1.00 64.98 O
ATOM 6 C5' G B 690 34.746 52.466 46.356 1.00 65.27 C
ATOM 7 C4' G B 690 35.276 51.989 47.689 1.00 65.03 C
ATOM 8 O4' G B 690 36.591 52.551 47.942 1.00 65.36 O
ATOM 9 C3' G B 690 34.483 52.395 48.918 1.00 63.93 C
ATOM 10 O3' G B 690 33.314 51.614 49.100 1.00 62.85 O
ATOM 11 C2' G B 690 35.505 52.186 50.025 1.00 64.91 C
ATOM 12 O2' G B 690 35.662 50.833 50.392 1.00 64.65 O
ATOM 13 C1' G B 690 36.781 52.687 49.344 1.00 66.24 C
ATOM 14 N9 G B 690 37.012 54.094 49.662 1.00 68.01 N
ATOM 15 C8 G B 690 36.836 55.189 48.847 1.00 68.25 C
ATOM 16 N7 G B 690 37.071 56.322 49.455 1.00 68.80 N
ATOM 17 C5 G B 690 37.436 55.952 50.743 1.00 68.87 C
ATOM 18 C6 G B 690 37.794 56.746 51.867 1.00 68.85 C
ATOM 19 O6 G B 690 37.857 57.980 51.955 1.00 68.81 O
ATOM 20 N1 G B 690 38.091 55.955 52.975 1.00 68.55 N
ATOM 21 C2 G B 690 38.042 54.581 53.004 1.00 67.81 C
ATOM 22 N2 G B 690 38.351 53.999 54.165 1.00 67.75 N
ATOM 23 N3 G B 690 37.709 53.835 51.970 1.00 68.05 N
ATOM 24 C4 G B 690 37.420 54.579 50.881 1.00 68.66 C
ATOM 25 P G B 691 32.126 52.169 50.025 1.00 62.40 P
ATOM 26 OP1 G B 691 30.978 51.254 49.860 1.00 64.00 O
ATOM 27 OP2 G B 691 31.946 53.616 49.763 1.00 63.29 O
ATOM 28 O5' G B 691 32.687 51.971 51.503 1.00 62.50 O
TER
ATOM 2 P G A 731 41.176 67.512 48.256 1.00 45.27 P
ATOM 3 OP1 G A 731 40.275 68.655 47.946 1.00 45.54 O
ATOM 4 OP2 G A 731 41.405 67.129 49.668 1.00 44.89 O
ATOM 5 O5' G A 731 40.611 66.225 47.511 1.00 49.22 O
ATOM 6 C5' G A 731 40.387 66.214 46.087 1.00 49.09 C
ATOM 7 C4' G A 731 39.060 65.557 45.775 1.00 49.58 C
ATOM 8 O4' G A 731 39.041 64.212 46.323 1.00 51.70 O
ATOM 9 C3' G A 731 37.844 66.218 46.398 1.00 48.93 C
ATOM 10 O3' G A 731 37.398 67.295 45.596 1.00 46.37 O
ATOM 11 C2' G A 731 36.830 65.084 46.429 1.00 50.42 C
ATOM 12 O2' G A 731 36.222 64.872 45.172 1.00 51.44 O
ATOM 13 C1' G A 731 37.727 63.889 46.757 1.00 52.55 C
ATOM 14 N9 G A 731 37.786 63.547 48.175 1.00 53.83 N
ATOM 15 C8 G A 731 37.716 64.408 49.244 1.00 54.33 C
ATOM 16 N7 G A 731 37.839 63.807 50.395 1.00 55.54 N
ATOM 17 C5 G A 731 37.992 62.467 50.069 1.00 54.56 C
ATOM 18 C6 G A 731 38.179 61.337 50.903 1.00 54.22 C
ATOM 19 O6 G A 731 38.254 61.293 52.133 1.00 54.62 O
ATOM 20 N1 G A 731 38.284 60.167 50.161 1.00 55.25 N
ATOM 21 C2 G A 731 38.219 60.090 48.792 1.00 54.96 C
ATOM 22 N2 G A 731 38.339 58.864 48.264 1.00 53.29 N
ATOM 23 N3 G A 731 38.049 61.138 48.001 1.00 54.23 N
ATOM 24 C4 G A 731 37.946 62.287 48.703 1.00 54.54 C
ATOM 25 P G A 732 36.244 68.261 46.140 1.00 47.21 P
ATOM 26 OP1 G A 732 36.536 68.535 47.574 1.00 46.48 O
ATOM 27 OP2 G A 732 34.928 67.691 45.767 1.00 47.92 O
ATOM 28 O5' G A 732 36.469 69.588 45.289 1.00 48.50 O
TER
ATOM 1 O3' U B 689 34.694 56.171 45.610 1.00 64.55 O
ATOM 2 P G B 690 34.189 54.731 45.122 1.00 65.01 P
ATOM 3 OP1 G B 690 35.142 54.277 44.073 1.00 62.92 O
ATOM 4 OP2 G B 690 32.734 54.797 44.818 1.00 64.01 O
ATOM 5 O5' G B 690 34.389 53.851 46.434 1.00 64.98 O
ATOM 6 C5' G B 690 34.746 52.466 46.356 1.00 65.27 C
ATOM 7 C4' G B 690 35.276 51.989 47.689 1.00 65.03 C
ATOM 8 O4' G B 690 36.591 52.551 47.942 1.00 65.36 O
ATOM 9 C3' G B 690 34.483 52.395 48.918 1.00 63.93 C
ATOM 10 O3' G B 690 33.314 51.614 49.100 1.00 62.85 O
ATOM 11 C2' G B 690 35.505 52.186 50.025 1.00 64.91 C
ATOM 12 O2' G B 690 35.662 50.833 50.392 1.00 64.65 O
ATOM 13 C1' G B 690 36.781 52.687 49.344 1.00 66.24 C
ATOM 14 N9 G B 690 37.012 54.094 49.662 1.00 68.01 N
ATOM 15 C8 G B 690 36.836 55.189 48.847 1.00 68.25 C
ATOM 16 N7 G B 690 37.071 56.322 49.455 1.00 68.80 N
ATOM 17 C5 G B 690 37.436 55.952 50.743 1.00 68.87 C
ATOM 18 C6 G B 690 37.794 56.746 51.867 1.00 68.85 C
ATOM 19 O6 G B 690 37.857 57.980 51.955 1.00 68.81 O
ATOM 20 N1 G B 690 38.091 55.955 52.975 1.00 68.55 N
ATOM 21 C2 G B 690 38.042 54.581 53.004 1.00 67.81 C
ATOM 22 N2 G B 690 38.351 53.999 54.165 1.00 67.75 N
ATOM 23 N3 G B 690 37.709 53.835 51.970 1.00 68.05 N
ATOM 24 C4 G B 690 37.420 54.579 50.881 1.00 68.66 C
ATOM 25 P G B 691 32.126 52.169 50.025 1.00 62.40 P
ATOM 26 OP1 G B 691 30.978 51.254 49.860 1.00 64.00 O
ATOM 27 OP2 G B 691 31.946 53.616 49.763 1.00 63.29 O
ATOM 28 O5' G B 691 32.687 51.971 51.503 1.00 62.50 O
TER
Atoms:
OP1: (40.275,68.655,47.946)
OP2: (41.405,67.129,49.668)
C3': (37.844,66.218,46.398)
C1': (37.727,63.889,46.757)
C5': (40.387,66.214,46.087)
O6: (38.254,61.293,52.133)
O4': (39.041,64.212,46.323)
C8: (37.716,64.408,49.244)
C2: (38.219,60.090,48.792)
C6: (38.179,61.337,50.903)
C5: (37.992,62.467,50.069)
C4: (37.946,62.287,48.703)
P: (41.176,67.512,48.256)
C4': (39.060,65.557,45.775)
C2': (36.830,65.084,46.429)
O2': (36.222,64.872,45.172)
N1: (38.284,60.167,50.161)
N2: (38.339,58.864,48.264)
N3: (38.049,61.138,48.001)
N7: (37.839,63.807,50.395)
N9: (37.786,63.547,48.175)
O5': (40.611,66.225,47.511)
O3': (37.398,67.295,45.596)
OP2: (41.405,67.129,49.668)
C3': (37.844,66.218,46.398)
C1': (37.727,63.889,46.757)
C5': (40.387,66.214,46.087)
O6: (38.254,61.293,52.133)
O4': (39.041,64.212,46.323)
C8: (37.716,64.408,49.244)
C2: (38.219,60.090,48.792)
C6: (38.179,61.337,50.903)
C5: (37.992,62.467,50.069)
C4: (37.946,62.287,48.703)
P: (41.176,67.512,48.256)
C4': (39.060,65.557,45.775)
C2': (36.830,65.084,46.429)
O2': (36.222,64.872,45.172)
N1: (38.284,60.167,50.161)
N2: (38.339,58.864,48.264)
N3: (38.049,61.138,48.001)
N7: (37.839,63.807,50.395)
N9: (37.786,63.547,48.175)
O5': (40.611,66.225,47.511)
O3': (37.398,67.295,45.596)
OP1: (35.142,54.277,44.073)
OP2: (32.734,54.797,44.818)
C3': (34.483,52.395,48.918)
C1': (36.781,52.687,49.344)
C5': (34.746,52.466,46.356)
O6: (37.857,57.980,51.955)
O4': (36.591,52.551,47.942)
C8: (36.836,55.189,48.847)
C2: (38.042,54.581,53.004)
C6: (37.794,56.746,51.867)
C5: (37.436,55.952,50.743)
C4: (37.420,54.579,50.881)
P: (34.189,54.731,45.122)
C4': (35.276,51.989,47.689)
C2': (35.505,52.186,50.025)
O2': (35.662,50.833,50.392)
N1: (38.091,55.955,52.975)
N2: (38.351,53.999,54.165)
N3: (37.709,53.835,51.970)
N7: (37.071,56.322,49.455)
N9: (37.012,54.094,49.662)
O5': (34.389,53.851,46.434)
O3': (33.314,51.614,49.100)
OP2: (32.734,54.797,44.818)
C3': (34.483,52.395,48.918)
C1': (36.781,52.687,49.344)
C5': (34.746,52.466,46.356)
O6: (37.857,57.980,51.955)
O4': (36.591,52.551,47.942)
C8: (36.836,55.189,48.847)
C2: (38.042,54.581,53.004)
C6: (37.794,56.746,51.867)
C5: (37.436,55.952,50.743)
C4: (37.420,54.579,50.881)
P: (34.189,54.731,45.122)
C4': (35.276,51.989,47.689)
C2': (35.505,52.186,50.025)
O2': (35.662,50.833,50.392)
N1: (38.091,55.955,52.975)
N2: (38.351,53.999,54.165)
N3: (37.709,53.835,51.970)
N7: (37.071,56.322,49.455)
N9: (37.012,54.094,49.662)
O5': (34.389,53.851,46.434)
O3': (33.314,51.614,49.100)
Image (generated by PyMOL):