Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:046:074
Extra
PDB:
ATOM 1 O3' U A 45 55.665 165.835 36.211 1.00 62.80 O
ATOM 2 P G A 46 54.631 166.751 37.031 1.00 62.77 P
ATOM 3 OP1 G A 46 54.264 167.890 36.149 1.00 62.94 O
ATOM 4 OP2 G A 46 55.195 167.024 38.370 1.00 64.88 O
ATOM 5 O5' G A 46 53.356 165.818 37.195 1.00 62.47 O
ATOM 6 C5' G A 46 52.655 165.355 36.040 1.00 62.19 C
ATOM 7 C4' G A 46 51.174 165.460 36.257 1.00 62.71 C
ATOM 8 O4' G A 46 50.741 164.382 37.123 1.00 63.26 O
ATOM 9 C3' G A 46 50.671 166.751 36.893 1.00 63.00 C
ATOM 10 O3' G A 46 49.418 167.090 36.306 1.00 65.10 O
ATOM 11 C2' G A 46 50.474 166.349 38.352 1.00 61.56 C
ATOM 12 O2' G A 46 49.477 167.112 38.996 1.00 59.98 O
ATOM 13 C1' G A 46 49.999 164.908 38.200 1.00 62.95 C
ATOM 14 N9 G A 46 50.178 164.023 39.352 1.00 65.17 N
ATOM 15 C8 G A 46 50.893 164.262 40.505 1.00 65.01 C
ATOM 16 N7 G A 46 50.863 163.262 41.345 1.00 64.17 N
ATOM 17 C5 G A 46 50.085 162.304 40.711 1.00 64.89 C
ATOM 18 C6 G A 46 49.706 161.010 41.132 1.00 64.69 C
ATOM 19 O6 G A 46 49.989 160.433 42.184 1.00 66.95 O
ATOM 20 N1 G A 46 48.915 160.373 40.183 1.00 64.56 N
ATOM 21 C2 G A 46 48.534 160.912 38.982 1.00 64.10 C
ATOM 22 N2 G A 46 47.776 160.136 38.206 1.00 64.25 N
ATOM 23 N3 G A 46 48.874 162.119 38.574 1.00 64.42 N
ATOM 24 C4 G A 46 49.649 162.757 39.483 1.00 65.44 C
ATOM 25 P C A 47 49.252 168.491 35.538 1.00 64.04 P
ATOM 26 OP1 C A 47 48.028 168.416 34.695 1.00 63.97 O
ATOM 27 OP2 C A 47 50.566 168.801 34.914 1.00 61.97 O
ATOM 28 O5' C A 47 48.973 169.543 36.700 1.00 64.31 O
TER
ATOM 1 O3' C B 73 42.066 160.908 34.706 1.00 63.44 O
ATOM 2 P G B 74 41.769 160.410 36.213 1.00 65.06 P
ATOM 3 OP1 G B 74 40.304 160.425 36.492 1.00 63.91 O
ATOM 4 OP2 G B 74 42.678 161.185 37.084 1.00 64.78 O
ATOM 5 O5' G B 74 42.246 158.885 36.205 1.00 64.83 O
ATOM 6 C5' G B 74 41.599 157.903 35.361 1.00 64.16 C
ATOM 7 C4' G B 74 41.900 156.496 35.843 1.00 63.20 C
ATOM 8 O4' G B 74 43.318 156.215 35.722 1.00 64.03 O
ATOM 9 C3' G B 74 41.579 156.218 37.298 1.00 62.53 C
ATOM 10 O3' G B 74 40.218 155.868 37.441 1.00 63.45 O
ATOM 11 C2' G B 74 42.488 155.045 37.613 1.00 63.17 C
ATOM 12 O2' G B 74 41.959 153.840 37.108 1.00 64.24 O
ATOM 13 C1' G B 74 43.743 155.415 36.817 1.00 64.57 C
ATOM 14 N9 G B 74 44.732 156.175 37.584 1.00 64.83 N
ATOM 15 C8 G B 74 45.096 157.485 37.382 1.00 65.48 C
ATOM 16 N7 G B 74 45.992 157.909 38.231 1.00 65.13 N
ATOM 17 C5 G B 74 46.243 156.813 39.041 1.00 65.20 C
ATOM 18 C6 G B 74 47.122 156.675 40.133 1.00 63.84 C
ATOM 19 O6 G B 74 47.884 157.508 40.613 1.00 65.27 O
ATOM 20 N1 G B 74 47.062 155.406 40.678 1.00 64.00 N
ATOM 21 C2 G B 74 46.264 154.393 40.229 1.00 65.30 C
ATOM 22 N2 G B 74 46.354 153.240 40.904 1.00 67.39 N
ATOM 23 N3 G B 74 45.439 154.500 39.197 1.00 65.60 N
ATOM 24 C4 G B 74 45.478 155.732 38.655 1.00 65.35 C
ATOM 25 P C B 75 39.466 156.155 38.823 1.00 65.26 P
ATOM 26 OP1 C B 75 38.079 155.659 38.663 1.00 66.36 O
ATOM 27 OP2 C B 75 39.698 157.565 39.217 1.00 64.32 O
ATOM 28 O5' C B 75 40.203 155.206 39.861 1.00 67.13 O
TER
ATOM 2 P G A 46 54.631 166.751 37.031 1.00 62.77 P
ATOM 3 OP1 G A 46 54.264 167.890 36.149 1.00 62.94 O
ATOM 4 OP2 G A 46 55.195 167.024 38.370 1.00 64.88 O
ATOM 5 O5' G A 46 53.356 165.818 37.195 1.00 62.47 O
ATOM 6 C5' G A 46 52.655 165.355 36.040 1.00 62.19 C
ATOM 7 C4' G A 46 51.174 165.460 36.257 1.00 62.71 C
ATOM 8 O4' G A 46 50.741 164.382 37.123 1.00 63.26 O
ATOM 9 C3' G A 46 50.671 166.751 36.893 1.00 63.00 C
ATOM 10 O3' G A 46 49.418 167.090 36.306 1.00 65.10 O
ATOM 11 C2' G A 46 50.474 166.349 38.352 1.00 61.56 C
ATOM 12 O2' G A 46 49.477 167.112 38.996 1.00 59.98 O
ATOM 13 C1' G A 46 49.999 164.908 38.200 1.00 62.95 C
ATOM 14 N9 G A 46 50.178 164.023 39.352 1.00 65.17 N
ATOM 15 C8 G A 46 50.893 164.262 40.505 1.00 65.01 C
ATOM 16 N7 G A 46 50.863 163.262 41.345 1.00 64.17 N
ATOM 17 C5 G A 46 50.085 162.304 40.711 1.00 64.89 C
ATOM 18 C6 G A 46 49.706 161.010 41.132 1.00 64.69 C
ATOM 19 O6 G A 46 49.989 160.433 42.184 1.00 66.95 O
ATOM 20 N1 G A 46 48.915 160.373 40.183 1.00 64.56 N
ATOM 21 C2 G A 46 48.534 160.912 38.982 1.00 64.10 C
ATOM 22 N2 G A 46 47.776 160.136 38.206 1.00 64.25 N
ATOM 23 N3 G A 46 48.874 162.119 38.574 1.00 64.42 N
ATOM 24 C4 G A 46 49.649 162.757 39.483 1.00 65.44 C
ATOM 25 P C A 47 49.252 168.491 35.538 1.00 64.04 P
ATOM 26 OP1 C A 47 48.028 168.416 34.695 1.00 63.97 O
ATOM 27 OP2 C A 47 50.566 168.801 34.914 1.00 61.97 O
ATOM 28 O5' C A 47 48.973 169.543 36.700 1.00 64.31 O
TER
ATOM 1 O3' C B 73 42.066 160.908 34.706 1.00 63.44 O
ATOM 2 P G B 74 41.769 160.410 36.213 1.00 65.06 P
ATOM 3 OP1 G B 74 40.304 160.425 36.492 1.00 63.91 O
ATOM 4 OP2 G B 74 42.678 161.185 37.084 1.00 64.78 O
ATOM 5 O5' G B 74 42.246 158.885 36.205 1.00 64.83 O
ATOM 6 C5' G B 74 41.599 157.903 35.361 1.00 64.16 C
ATOM 7 C4' G B 74 41.900 156.496 35.843 1.00 63.20 C
ATOM 8 O4' G B 74 43.318 156.215 35.722 1.00 64.03 O
ATOM 9 C3' G B 74 41.579 156.218 37.298 1.00 62.53 C
ATOM 10 O3' G B 74 40.218 155.868 37.441 1.00 63.45 O
ATOM 11 C2' G B 74 42.488 155.045 37.613 1.00 63.17 C
ATOM 12 O2' G B 74 41.959 153.840 37.108 1.00 64.24 O
ATOM 13 C1' G B 74 43.743 155.415 36.817 1.00 64.57 C
ATOM 14 N9 G B 74 44.732 156.175 37.584 1.00 64.83 N
ATOM 15 C8 G B 74 45.096 157.485 37.382 1.00 65.48 C
ATOM 16 N7 G B 74 45.992 157.909 38.231 1.00 65.13 N
ATOM 17 C5 G B 74 46.243 156.813 39.041 1.00 65.20 C
ATOM 18 C6 G B 74 47.122 156.675 40.133 1.00 63.84 C
ATOM 19 O6 G B 74 47.884 157.508 40.613 1.00 65.27 O
ATOM 20 N1 G B 74 47.062 155.406 40.678 1.00 64.00 N
ATOM 21 C2 G B 74 46.264 154.393 40.229 1.00 65.30 C
ATOM 22 N2 G B 74 46.354 153.240 40.904 1.00 67.39 N
ATOM 23 N3 G B 74 45.439 154.500 39.197 1.00 65.60 N
ATOM 24 C4 G B 74 45.478 155.732 38.655 1.00 65.35 C
ATOM 25 P C B 75 39.466 156.155 38.823 1.00 65.26 P
ATOM 26 OP1 C B 75 38.079 155.659 38.663 1.00 66.36 O
ATOM 27 OP2 C B 75 39.698 157.565 39.217 1.00 64.32 O
ATOM 28 O5' C B 75 40.203 155.206 39.861 1.00 67.13 O
TER
Atoms:
OP1: (54.264,167.890,36.149)
OP2: (55.195,167.024,38.370)
C3': (50.671,166.751,36.893)
C1': (49.999,164.908,38.200)
C5': (52.655,165.355,36.040)
O6: (49.989,160.433,42.184)
O4': (50.741,164.382,37.123)
C8: (50.893,164.262,40.505)
C2: (48.534,160.912,38.982)
C6: (49.706,161.010,41.132)
C5: (50.085,162.304,40.711)
C4: (49.649,162.757,39.483)
P: (54.631,166.751,37.031)
C4': (51.174,165.460,36.257)
C2': (50.474,166.349,38.352)
O2': (49.477,167.112,38.996)
N1: (48.915,160.373,40.183)
N2: (47.776,160.136,38.206)
N3: (48.874,162.119,38.574)
N7: (50.863,163.262,41.345)
N9: (50.178,164.023,39.352)
O5': (53.356,165.818,37.195)
O3': (49.418,167.090,36.306)
OP2: (55.195,167.024,38.370)
C3': (50.671,166.751,36.893)
C1': (49.999,164.908,38.200)
C5': (52.655,165.355,36.040)
O6: (49.989,160.433,42.184)
O4': (50.741,164.382,37.123)
C8: (50.893,164.262,40.505)
C2: (48.534,160.912,38.982)
C6: (49.706,161.010,41.132)
C5: (50.085,162.304,40.711)
C4: (49.649,162.757,39.483)
P: (54.631,166.751,37.031)
C4': (51.174,165.460,36.257)
C2': (50.474,166.349,38.352)
O2': (49.477,167.112,38.996)
N1: (48.915,160.373,40.183)
N2: (47.776,160.136,38.206)
N3: (48.874,162.119,38.574)
N7: (50.863,163.262,41.345)
N9: (50.178,164.023,39.352)
O5': (53.356,165.818,37.195)
O3': (49.418,167.090,36.306)
OP1: (40.304,160.425,36.492)
OP2: (42.678,161.185,37.084)
C3': (41.579,156.218,37.298)
C1': (43.743,155.415,36.817)
C5': (41.599,157.903,35.361)
O6: (47.884,157.508,40.613)
O4': (43.318,156.215,35.722)
C8: (45.096,157.485,37.382)
C2: (46.264,154.393,40.229)
C6: (47.122,156.675,40.133)
C5: (46.243,156.813,39.041)
C4: (45.478,155.732,38.655)
P: (41.769,160.410,36.213)
C4': (41.900,156.496,35.843)
C2': (42.488,155.045,37.613)
O2': (41.959,153.840,37.108)
N1: (47.062,155.406,40.678)
N2: (46.354,153.240,40.904)
N3: (45.439,154.500,39.197)
N7: (45.992,157.909,38.231)
N9: (44.732,156.175,37.584)
O5': (42.246,158.885,36.205)
O3': (40.218,155.868,37.441)
OP2: (42.678,161.185,37.084)
C3': (41.579,156.218,37.298)
C1': (43.743,155.415,36.817)
C5': (41.599,157.903,35.361)
O6: (47.884,157.508,40.613)
O4': (43.318,156.215,35.722)
C8: (45.096,157.485,37.382)
C2: (46.264,154.393,40.229)
C6: (47.122,156.675,40.133)
C5: (46.243,156.813,39.041)
C4: (45.478,155.732,38.655)
P: (41.769,160.410,36.213)
C4': (41.900,156.496,35.843)
C2': (42.488,155.045,37.613)
O2': (41.959,153.840,37.108)
N1: (47.062,155.406,40.678)
N2: (46.354,153.240,40.904)
N3: (45.439,154.500,39.197)
N7: (45.992,157.909,38.231)
N9: (44.732,156.175,37.584)
O5': (42.246,158.885,36.205)
O3': (40.218,155.868,37.441)
Image (generated by PyMOL):