Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0592:0595
Extra
PDB:
ATOM 1 O3' A A 591 -5.260 134.573 88.737 1.00 92.48 O
ATOM 2 P G A 592 -4.318 135.666 89.448 1.00 92.93 P
ATOM 3 OP1 G A 592 -5.060 136.316 90.564 1.00 92.36 O
ATOM 4 OP2 G A 592 -3.758 136.498 88.350 1.00 92.72 O
ATOM 5 O5' G A 592 -3.144 134.791 90.084 1.00 90.83 O
ATOM 6 C5' G A 592 -2.340 135.290 91.173 1.00 86.03 C
ATOM 7 C4' G A 592 -1.562 134.158 91.814 1.00 82.85 C
ATOM 8 O4' G A 592 -0.838 133.421 90.792 1.00 81.66 O
ATOM 9 C3' G A 592 -0.519 134.588 92.843 1.00 82.01 C
ATOM 10 O3' G A 592 -0.330 133.586 93.845 1.00 82.24 O
ATOM 11 C2' G A 592 0.754 134.644 92.004 1.00 81.42 C
ATOM 12 O2' G A 592 1.930 134.488 92.775 1.00 81.59 O
ATOM 13 C1' G A 592 0.545 133.443 91.082 1.00 80.38 C
ATOM 14 N9 G A 592 1.280 133.487 89.820 1.00 78.21 N
ATOM 15 C8 G A 592 1.550 134.592 89.046 1.00 77.50 C
ATOM 16 N7 G A 592 2.229 134.309 87.967 1.00 76.86 N
ATOM 17 C5 G A 592 2.422 132.936 88.031 1.00 76.49 C
ATOM 18 C6 G A 592 3.098 132.061 87.141 1.00 75.70 C
ATOM 19 O6 G A 592 3.690 132.335 86.091 1.00 74.55 O
ATOM 20 N1 G A 592 3.043 130.745 87.582 1.00 75.80 N
ATOM 21 C2 G A 592 2.428 130.321 88.734 1.00 76.71 C
ATOM 22 N2 G A 592 2.482 129.007 88.979 1.00 76.93 N
ATOM 23 N3 G A 592 1.806 131.126 89.580 1.00 76.38 N
ATOM 24 C4 G A 592 1.840 132.412 89.167 1.00 77.11 C
ATOM 25 P C A 593 -1.591 132.987 94.643 1.00 80.88 P
ATOM 26 OP1 C A 593 -2.644 134.032 94.739 1.00 81.56 O
ATOM 27 OP2 C A 593 -1.062 132.374 95.891 1.00 79.08 O
ATOM 28 O5' C A 593 -2.101 131.826 93.668 1.00 77.42 O
TER
ATOM 1 O3' C B 594 1.748 123.036 91.722 1.00 57.46 O
ATOM 2 P G B 595 3.291 123.491 91.805 1.00 56.65 P
ATOM 3 OP1 G B 595 3.948 122.632 92.825 1.00 58.62 O
ATOM 4 OP2 G B 595 3.343 124.975 91.949 1.00 53.56 O
ATOM 5 O5' G B 595 3.880 123.083 90.381 1.00 55.32 O
ATOM 6 C5' G B 595 3.769 121.729 89.909 1.00 53.11 C
ATOM 7 C4' G B 595 3.951 121.668 88.408 1.00 53.67 C
ATOM 8 O4' G B 595 2.955 122.495 87.751 1.00 51.39 O
ATOM 9 C3' G B 595 5.268 122.187 87.858 1.00 54.42 C
ATOM 10 O3' G B 595 6.299 121.211 87.972 1.00 56.58 O
ATOM 11 C2' G B 595 4.908 122.469 86.404 1.00 51.63 C
ATOM 12 O2' G B 595 4.832 121.294 85.624 1.00 54.32 O
ATOM 13 C1' G B 595 3.494 123.024 86.552 1.00 47.47 C
ATOM 14 N9 G B 595 3.472 124.476 86.641 1.00 42.69 N
ATOM 15 C8 G B 595 3.123 125.239 87.727 1.00 41.71 C
ATOM 16 N7 G B 595 3.186 126.520 87.493 1.00 40.44 N
ATOM 17 C5 G B 595 3.606 126.605 86.175 1.00 40.67 C
ATOM 18 C6 G B 595 3.854 127.734 85.372 1.00 41.21 C
ATOM 19 O6 G B 595 3.734 128.926 85.668 1.00 44.76 O
ATOM 20 N1 G B 595 4.278 127.375 84.097 1.00 39.95 N
ATOM 21 C2 G B 595 4.436 126.088 83.652 1.00 41.17 C
ATOM 22 N2 G B 595 4.847 125.945 82.375 1.00 39.37 N
ATOM 23 N3 G B 595 4.204 125.019 84.399 1.00 40.79 N
ATOM 24 C4 G B 595 3.793 125.352 85.639 1.00 41.06 C
ATOM 25 P A B 596 7.798 121.676 88.312 1.00 59.25 P
ATOM 26 OP1 A B 596 8.676 120.513 88.014 1.00 57.74 O
ATOM 27 OP2 A B 596 7.852 122.332 89.649 1.00 57.92 O
ATOM 28 O5' A B 596 8.101 122.812 87.247 1.00 58.68 O
TER
ATOM 2 P G A 592 -4.318 135.666 89.448 1.00 92.93 P
ATOM 3 OP1 G A 592 -5.060 136.316 90.564 1.00 92.36 O
ATOM 4 OP2 G A 592 -3.758 136.498 88.350 1.00 92.72 O
ATOM 5 O5' G A 592 -3.144 134.791 90.084 1.00 90.83 O
ATOM 6 C5' G A 592 -2.340 135.290 91.173 1.00 86.03 C
ATOM 7 C4' G A 592 -1.562 134.158 91.814 1.00 82.85 C
ATOM 8 O4' G A 592 -0.838 133.421 90.792 1.00 81.66 O
ATOM 9 C3' G A 592 -0.519 134.588 92.843 1.00 82.01 C
ATOM 10 O3' G A 592 -0.330 133.586 93.845 1.00 82.24 O
ATOM 11 C2' G A 592 0.754 134.644 92.004 1.00 81.42 C
ATOM 12 O2' G A 592 1.930 134.488 92.775 1.00 81.59 O
ATOM 13 C1' G A 592 0.545 133.443 91.082 1.00 80.38 C
ATOM 14 N9 G A 592 1.280 133.487 89.820 1.00 78.21 N
ATOM 15 C8 G A 592 1.550 134.592 89.046 1.00 77.50 C
ATOM 16 N7 G A 592 2.229 134.309 87.967 1.00 76.86 N
ATOM 17 C5 G A 592 2.422 132.936 88.031 1.00 76.49 C
ATOM 18 C6 G A 592 3.098 132.061 87.141 1.00 75.70 C
ATOM 19 O6 G A 592 3.690 132.335 86.091 1.00 74.55 O
ATOM 20 N1 G A 592 3.043 130.745 87.582 1.00 75.80 N
ATOM 21 C2 G A 592 2.428 130.321 88.734 1.00 76.71 C
ATOM 22 N2 G A 592 2.482 129.007 88.979 1.00 76.93 N
ATOM 23 N3 G A 592 1.806 131.126 89.580 1.00 76.38 N
ATOM 24 C4 G A 592 1.840 132.412 89.167 1.00 77.11 C
ATOM 25 P C A 593 -1.591 132.987 94.643 1.00 80.88 P
ATOM 26 OP1 C A 593 -2.644 134.032 94.739 1.00 81.56 O
ATOM 27 OP2 C A 593 -1.062 132.374 95.891 1.00 79.08 O
ATOM 28 O5' C A 593 -2.101 131.826 93.668 1.00 77.42 O
TER
ATOM 1 O3' C B 594 1.748 123.036 91.722 1.00 57.46 O
ATOM 2 P G B 595 3.291 123.491 91.805 1.00 56.65 P
ATOM 3 OP1 G B 595 3.948 122.632 92.825 1.00 58.62 O
ATOM 4 OP2 G B 595 3.343 124.975 91.949 1.00 53.56 O
ATOM 5 O5' G B 595 3.880 123.083 90.381 1.00 55.32 O
ATOM 6 C5' G B 595 3.769 121.729 89.909 1.00 53.11 C
ATOM 7 C4' G B 595 3.951 121.668 88.408 1.00 53.67 C
ATOM 8 O4' G B 595 2.955 122.495 87.751 1.00 51.39 O
ATOM 9 C3' G B 595 5.268 122.187 87.858 1.00 54.42 C
ATOM 10 O3' G B 595 6.299 121.211 87.972 1.00 56.58 O
ATOM 11 C2' G B 595 4.908 122.469 86.404 1.00 51.63 C
ATOM 12 O2' G B 595 4.832 121.294 85.624 1.00 54.32 O
ATOM 13 C1' G B 595 3.494 123.024 86.552 1.00 47.47 C
ATOM 14 N9 G B 595 3.472 124.476 86.641 1.00 42.69 N
ATOM 15 C8 G B 595 3.123 125.239 87.727 1.00 41.71 C
ATOM 16 N7 G B 595 3.186 126.520 87.493 1.00 40.44 N
ATOM 17 C5 G B 595 3.606 126.605 86.175 1.00 40.67 C
ATOM 18 C6 G B 595 3.854 127.734 85.372 1.00 41.21 C
ATOM 19 O6 G B 595 3.734 128.926 85.668 1.00 44.76 O
ATOM 20 N1 G B 595 4.278 127.375 84.097 1.00 39.95 N
ATOM 21 C2 G B 595 4.436 126.088 83.652 1.00 41.17 C
ATOM 22 N2 G B 595 4.847 125.945 82.375 1.00 39.37 N
ATOM 23 N3 G B 595 4.204 125.019 84.399 1.00 40.79 N
ATOM 24 C4 G B 595 3.793 125.352 85.639 1.00 41.06 C
ATOM 25 P A B 596 7.798 121.676 88.312 1.00 59.25 P
ATOM 26 OP1 A B 596 8.676 120.513 88.014 1.00 57.74 O
ATOM 27 OP2 A B 596 7.852 122.332 89.649 1.00 57.92 O
ATOM 28 O5' A B 596 8.101 122.812 87.247 1.00 58.68 O
TER
Atoms:
OP1: (-5.060,136.316,90.564)
OP2: (-3.758,136.498,88.350)
C3': (-0.519,134.588,92.843)
C1': (0.545,133.443,91.082)
C5': (-2.340,135.290,91.173)
O6: (3.690,132.335,86.091)
O4': (-0.838,133.421,90.792)
C8: (1.550,134.592,89.046)
C2: (2.428,130.321,88.734)
C6: (3.098,132.061,87.141)
C5: (2.422,132.936,88.031)
C4: (1.840,132.412,89.167)
P: (-4.318,135.666,89.448)
C4': (-1.562,134.158,91.814)
C2': (0.754,134.644,92.004)
O2': (1.930,134.488,92.775)
N1: (3.043,130.745,87.582)
N2: (2.482,129.007,88.979)
N3: (1.806,131.126,89.580)
N7: (2.229,134.309,87.967)
N9: (1.280,133.487,89.820)
O5': (-3.144,134.791,90.084)
O3': (-0.330,133.586,93.845)
OP2: (-3.758,136.498,88.350)
C3': (-0.519,134.588,92.843)
C1': (0.545,133.443,91.082)
C5': (-2.340,135.290,91.173)
O6: (3.690,132.335,86.091)
O4': (-0.838,133.421,90.792)
C8: (1.550,134.592,89.046)
C2: (2.428,130.321,88.734)
C6: (3.098,132.061,87.141)
C5: (2.422,132.936,88.031)
C4: (1.840,132.412,89.167)
P: (-4.318,135.666,89.448)
C4': (-1.562,134.158,91.814)
C2': (0.754,134.644,92.004)
O2': (1.930,134.488,92.775)
N1: (3.043,130.745,87.582)
N2: (2.482,129.007,88.979)
N3: (1.806,131.126,89.580)
N7: (2.229,134.309,87.967)
N9: (1.280,133.487,89.820)
O5': (-3.144,134.791,90.084)
O3': (-0.330,133.586,93.845)
OP1: (3.948,122.632,92.825)
OP2: (3.343,124.975,91.949)
C3': (5.268,122.187,87.858)
C1': (3.494,123.024,86.552)
C5': (3.769,121.729,89.909)
O6: (3.734,128.926,85.668)
O4': (2.955,122.495,87.751)
C8: (3.123,125.239,87.727)
C2: (4.436,126.088,83.652)
C6: (3.854,127.734,85.372)
C5: (3.606,126.605,86.175)
C4: (3.793,125.352,85.639)
P: (3.291,123.491,91.805)
C4': (3.951,121.668,88.408)
C2': (4.908,122.469,86.404)
O2': (4.832,121.294,85.624)
N1: (4.278,127.375,84.097)
N2: (4.847,125.945,82.375)
N3: (4.204,125.019,84.399)
N7: (3.186,126.520,87.493)
N9: (3.472,124.476,86.641)
O5': (3.880,123.083,90.381)
O3': (6.299,121.211,87.972)
OP2: (3.343,124.975,91.949)
C3': (5.268,122.187,87.858)
C1': (3.494,123.024,86.552)
C5': (3.769,121.729,89.909)
O6: (3.734,128.926,85.668)
O4': (2.955,122.495,87.751)
C8: (3.123,125.239,87.727)
C2: (4.436,126.088,83.652)
C6: (3.854,127.734,85.372)
C5: (3.606,126.605,86.175)
C4: (3.793,125.352,85.639)
P: (3.291,123.491,91.805)
C4': (3.951,121.668,88.408)
C2': (4.908,122.469,86.404)
O2': (4.832,121.294,85.624)
N1: (4.278,127.375,84.097)
N2: (4.847,125.945,82.375)
N3: (4.204,125.019,84.399)
N7: (3.186,126.520,87.493)
N9: (3.472,124.476,86.641)
O5': (3.880,123.083,90.381)
O3': (6.299,121.211,87.972)
Image (generated by PyMOL):