Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0731:0690
Extra
PDB:
ATOM 1 O3' G A 730 42.922 68.003 47.822 1.00 53.11 O
ATOM 2 P G A 731 41.499 67.733 48.515 1.00 53.33 P
ATOM 3 OP1 G A 731 40.594 68.880 48.229 1.00 50.68 O
ATOM 4 OP2 G A 731 41.732 67.310 49.920 1.00 52.18 O
ATOM 5 O5' G A 731 40.937 66.464 47.731 1.00 58.51 O
ATOM 6 C5' G A 731 40.641 66.516 46.318 1.00 59.17 C
ATOM 7 C4' G A 731 39.302 65.867 46.040 1.00 59.63 C
ATOM 8 O4' G A 731 39.303 64.511 46.562 1.00 60.36 O
ATOM 9 C3' G A 731 38.104 66.510 46.716 1.00 59.85 C
ATOM 10 O3' G A 731 37.633 67.611 45.967 1.00 60.30 O
ATOM 11 C2' G A 731 37.091 65.376 46.739 1.00 61.24 C
ATOM 12 O2' G A 731 36.426 65.209 45.505 1.00 61.20 O
ATOM 13 C1' G A 731 37.997 64.172 47.004 1.00 62.37 C
ATOM 14 N9 G A 731 38.066 63.789 48.412 1.00 62.94 N
ATOM 15 C8 G A 731 38.080 64.623 49.504 1.00 63.22 C
ATOM 16 N7 G A 731 38.142 63.983 50.638 1.00 63.73 N
ATOM 17 C5 G A 731 38.173 62.646 50.273 1.00 63.72 C
ATOM 18 C6 G A 731 38.244 61.482 51.076 1.00 64.34 C
ATOM 19 O6 G A 731 38.303 61.399 52.311 1.00 64.43 O
ATOM 20 N1 G A 731 38.247 60.326 50.299 1.00 64.74 N
ATOM 21 C2 G A 731 38.189 60.297 48.925 1.00 64.52 C
ATOM 22 N2 G A 731 38.188 59.081 48.359 1.00 64.40 N
ATOM 23 N3 G A 731 38.132 61.379 48.165 1.00 63.29 N
ATOM 24 C4 G A 731 38.125 62.510 48.902 1.00 63.28 C
ATOM 25 P G A 732 36.417 68.497 46.530 1.00 62.96 P
ATOM 26 OP1 G A 732 36.594 68.639 48.003 1.00 63.42 O
ATOM 27 OP2 G A 732 35.141 67.950 45.999 1.00 62.31 O
ATOM 28 O5' G A 732 36.661 69.914 45.845 1.00 63.81 O
TER
ATOM 1 O3' U B 689 34.736 56.392 46.007 1.00 75.64 O
ATOM 2 P G B 690 34.269 54.957 45.467 1.00 75.35 P
ATOM 3 OP1 G B 690 35.245 54.558 44.411 1.00 73.79 O
ATOM 4 OP2 G B 690 32.816 55.003 45.153 1.00 73.24 O
ATOM 5 O5' G B 690 34.472 54.044 46.756 1.00 74.37 O
ATOM 6 C5' G B 690 34.918 52.692 46.653 1.00 73.17 C
ATOM 7 C4' G B 690 35.442 52.213 47.986 1.00 73.00 C
ATOM 8 O4' G B 690 36.761 52.764 48.245 1.00 72.28 O
ATOM 9 C3' G B 690 34.656 52.609 49.223 1.00 72.48 C
ATOM 10 O3' G B 690 33.461 51.863 49.404 1.00 73.50 O
ATOM 11 C2' G B 690 35.681 52.355 50.317 1.00 72.80 C
ATOM 12 O2' G B 690 35.845 50.988 50.622 1.00 71.96 O
ATOM 13 C1' G B 690 36.953 52.881 49.650 1.00 73.58 C
ATOM 14 N9 G B 690 37.151 54.288 49.994 1.00 75.40 N
ATOM 15 C8 G B 690 36.883 55.391 49.216 1.00 75.69 C
ATOM 16 N7 G B 690 37.109 56.519 49.833 1.00 75.84 N
ATOM 17 C5 G B 690 37.568 56.140 51.088 1.00 76.39 C
ATOM 18 C6 G B 690 37.964 56.928 52.203 1.00 76.77 C
ATOM 19 O6 G B 690 37.990 58.162 52.308 1.00 77.86 O
ATOM 20 N1 G B 690 38.357 56.132 53.275 1.00 75.88 N
ATOM 21 C2 G B 690 38.366 54.765 53.281 1.00 74.59 C
ATOM 22 N2 G B 690 38.771 54.186 54.411 1.00 74.89 N
ATOM 23 N3 G B 690 38.003 54.020 52.255 1.00 75.05 N
ATOM 24 C4 G B 690 37.615 54.768 51.199 1.00 75.68 C
ATOM 25 P G B 691 32.331 52.402 50.416 1.00 74.44 P
ATOM 26 OP1 G B 691 31.175 51.482 50.315 1.00 75.01 O
ATOM 27 OP2 G B 691 32.126 53.856 50.214 1.00 74.13 O
ATOM 28 O5' G B 691 32.981 52.175 51.850 1.00 74.16 O
TER
ATOM 2 P G A 731 41.499 67.733 48.515 1.00 53.33 P
ATOM 3 OP1 G A 731 40.594 68.880 48.229 1.00 50.68 O
ATOM 4 OP2 G A 731 41.732 67.310 49.920 1.00 52.18 O
ATOM 5 O5' G A 731 40.937 66.464 47.731 1.00 58.51 O
ATOM 6 C5' G A 731 40.641 66.516 46.318 1.00 59.17 C
ATOM 7 C4' G A 731 39.302 65.867 46.040 1.00 59.63 C
ATOM 8 O4' G A 731 39.303 64.511 46.562 1.00 60.36 O
ATOM 9 C3' G A 731 38.104 66.510 46.716 1.00 59.85 C
ATOM 10 O3' G A 731 37.633 67.611 45.967 1.00 60.30 O
ATOM 11 C2' G A 731 37.091 65.376 46.739 1.00 61.24 C
ATOM 12 O2' G A 731 36.426 65.209 45.505 1.00 61.20 O
ATOM 13 C1' G A 731 37.997 64.172 47.004 1.00 62.37 C
ATOM 14 N9 G A 731 38.066 63.789 48.412 1.00 62.94 N
ATOM 15 C8 G A 731 38.080 64.623 49.504 1.00 63.22 C
ATOM 16 N7 G A 731 38.142 63.983 50.638 1.00 63.73 N
ATOM 17 C5 G A 731 38.173 62.646 50.273 1.00 63.72 C
ATOM 18 C6 G A 731 38.244 61.482 51.076 1.00 64.34 C
ATOM 19 O6 G A 731 38.303 61.399 52.311 1.00 64.43 O
ATOM 20 N1 G A 731 38.247 60.326 50.299 1.00 64.74 N
ATOM 21 C2 G A 731 38.189 60.297 48.925 1.00 64.52 C
ATOM 22 N2 G A 731 38.188 59.081 48.359 1.00 64.40 N
ATOM 23 N3 G A 731 38.132 61.379 48.165 1.00 63.29 N
ATOM 24 C4 G A 731 38.125 62.510 48.902 1.00 63.28 C
ATOM 25 P G A 732 36.417 68.497 46.530 1.00 62.96 P
ATOM 26 OP1 G A 732 36.594 68.639 48.003 1.00 63.42 O
ATOM 27 OP2 G A 732 35.141 67.950 45.999 1.00 62.31 O
ATOM 28 O5' G A 732 36.661 69.914 45.845 1.00 63.81 O
TER
ATOM 1 O3' U B 689 34.736 56.392 46.007 1.00 75.64 O
ATOM 2 P G B 690 34.269 54.957 45.467 1.00 75.35 P
ATOM 3 OP1 G B 690 35.245 54.558 44.411 1.00 73.79 O
ATOM 4 OP2 G B 690 32.816 55.003 45.153 1.00 73.24 O
ATOM 5 O5' G B 690 34.472 54.044 46.756 1.00 74.37 O
ATOM 6 C5' G B 690 34.918 52.692 46.653 1.00 73.17 C
ATOM 7 C4' G B 690 35.442 52.213 47.986 1.00 73.00 C
ATOM 8 O4' G B 690 36.761 52.764 48.245 1.00 72.28 O
ATOM 9 C3' G B 690 34.656 52.609 49.223 1.00 72.48 C
ATOM 10 O3' G B 690 33.461 51.863 49.404 1.00 73.50 O
ATOM 11 C2' G B 690 35.681 52.355 50.317 1.00 72.80 C
ATOM 12 O2' G B 690 35.845 50.988 50.622 1.00 71.96 O
ATOM 13 C1' G B 690 36.953 52.881 49.650 1.00 73.58 C
ATOM 14 N9 G B 690 37.151 54.288 49.994 1.00 75.40 N
ATOM 15 C8 G B 690 36.883 55.391 49.216 1.00 75.69 C
ATOM 16 N7 G B 690 37.109 56.519 49.833 1.00 75.84 N
ATOM 17 C5 G B 690 37.568 56.140 51.088 1.00 76.39 C
ATOM 18 C6 G B 690 37.964 56.928 52.203 1.00 76.77 C
ATOM 19 O6 G B 690 37.990 58.162 52.308 1.00 77.86 O
ATOM 20 N1 G B 690 38.357 56.132 53.275 1.00 75.88 N
ATOM 21 C2 G B 690 38.366 54.765 53.281 1.00 74.59 C
ATOM 22 N2 G B 690 38.771 54.186 54.411 1.00 74.89 N
ATOM 23 N3 G B 690 38.003 54.020 52.255 1.00 75.05 N
ATOM 24 C4 G B 690 37.615 54.768 51.199 1.00 75.68 C
ATOM 25 P G B 691 32.331 52.402 50.416 1.00 74.44 P
ATOM 26 OP1 G B 691 31.175 51.482 50.315 1.00 75.01 O
ATOM 27 OP2 G B 691 32.126 53.856 50.214 1.00 74.13 O
ATOM 28 O5' G B 691 32.981 52.175 51.850 1.00 74.16 O
TER
Atoms:
OP1: (40.594,68.880,48.229)
OP2: (41.732,67.310,49.920)
C3': (38.104,66.510,46.716)
C1': (37.997,64.172,47.004)
C5': (40.641,66.516,46.318)
O6: (38.303,61.399,52.311)
O4': (39.303,64.511,46.562)
C8: (38.080,64.623,49.504)
C2: (38.189,60.297,48.925)
C6: (38.244,61.482,51.076)
C5: (38.173,62.646,50.273)
C4: (38.125,62.510,48.902)
P: (41.499,67.733,48.515)
C4': (39.302,65.867,46.040)
C2': (37.091,65.376,46.739)
O2': (36.426,65.209,45.505)
N1: (38.247,60.326,50.299)
N2: (38.188,59.081,48.359)
N3: (38.132,61.379,48.165)
N7: (38.142,63.983,50.638)
N9: (38.066,63.789,48.412)
O5': (40.937,66.464,47.731)
O3': (37.633,67.611,45.967)
OP2: (41.732,67.310,49.920)
C3': (38.104,66.510,46.716)
C1': (37.997,64.172,47.004)
C5': (40.641,66.516,46.318)
O6: (38.303,61.399,52.311)
O4': (39.303,64.511,46.562)
C8: (38.080,64.623,49.504)
C2: (38.189,60.297,48.925)
C6: (38.244,61.482,51.076)
C5: (38.173,62.646,50.273)
C4: (38.125,62.510,48.902)
P: (41.499,67.733,48.515)
C4': (39.302,65.867,46.040)
C2': (37.091,65.376,46.739)
O2': (36.426,65.209,45.505)
N1: (38.247,60.326,50.299)
N2: (38.188,59.081,48.359)
N3: (38.132,61.379,48.165)
N7: (38.142,63.983,50.638)
N9: (38.066,63.789,48.412)
O5': (40.937,66.464,47.731)
O3': (37.633,67.611,45.967)
OP1: (35.245,54.558,44.411)
OP2: (32.816,55.003,45.153)
C3': (34.656,52.609,49.223)
C1': (36.953,52.881,49.650)
C5': (34.918,52.692,46.653)
O6: (37.990,58.162,52.308)
O4': (36.761,52.764,48.245)
C8: (36.883,55.391,49.216)
C2: (38.366,54.765,53.281)
C6: (37.964,56.928,52.203)
C5: (37.568,56.140,51.088)
C4: (37.615,54.768,51.199)
P: (34.269,54.957,45.467)
C4': (35.442,52.213,47.986)
C2': (35.681,52.355,50.317)
O2': (35.845,50.988,50.622)
N1: (38.357,56.132,53.275)
N2: (38.771,54.186,54.411)
N3: (38.003,54.020,52.255)
N7: (37.109,56.519,49.833)
N9: (37.151,54.288,49.994)
O5': (34.472,54.044,46.756)
O3': (33.461,51.863,49.404)
OP2: (32.816,55.003,45.153)
C3': (34.656,52.609,49.223)
C1': (36.953,52.881,49.650)
C5': (34.918,52.692,46.653)
O6: (37.990,58.162,52.308)
O4': (36.761,52.764,48.245)
C8: (36.883,55.391,49.216)
C2: (38.366,54.765,53.281)
C6: (37.964,56.928,52.203)
C5: (37.568,56.140,51.088)
C4: (37.615,54.768,51.199)
P: (34.269,54.957,45.467)
C4': (35.442,52.213,47.986)
C2': (35.681,52.355,50.317)
O2': (35.845,50.988,50.622)
N1: (38.357,56.132,53.275)
N2: (38.771,54.186,54.411)
N3: (38.003,54.020,52.255)
N7: (37.109,56.519,49.833)
N9: (37.151,54.288,49.994)
O5': (34.472,54.044,46.756)
O3': (33.461,51.863,49.404)
Image (generated by PyMOL):