Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:046:074
Extra
PDB:
ATOM 1 O3' U A 45 55.390 165.561 35.996 1.00 54.38 O
ATOM 2 P G A 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 3 OP1 G A 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 4 OP2 G A 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 5 O5' G A 46 53.104 165.794 37.005 1.00 54.35 O
ATOM 6 C5' G A 46 52.425 165.333 35.839 1.00 53.60 C
ATOM 7 C4' G A 46 50.942 165.385 36.050 1.00 54.27 C
ATOM 8 O4' G A 46 50.546 164.300 36.925 1.00 54.94 O
ATOM 9 C3' G A 46 50.389 166.661 36.675 1.00 54.61 C
ATOM 10 O3' G A 46 49.130 166.945 36.076 1.00 57.10 O
ATOM 11 C2' G A 46 50.173 166.254 38.129 1.00 53.33 C
ATOM 12 O2' G A 46 49.151 166.996 38.755 1.00 52.20 O
ATOM 13 C1' G A 46 49.725 164.809 37.952 1.00 54.40 C
ATOM 14 N9 G A 46 49.838 163.928 39.112 1.00 55.83 N
ATOM 15 C8 G A 46 50.448 164.191 40.316 1.00 55.21 C
ATOM 16 N7 G A 46 50.381 163.190 41.153 1.00 55.12 N
ATOM 17 C5 G A 46 49.689 162.205 40.459 1.00 55.72 C
ATOM 18 C6 G A 46 49.322 160.889 40.848 1.00 54.99 C
ATOM 19 O6 G A 46 49.536 160.316 41.920 1.00 55.21 O
ATOM 20 N1 G A 46 48.635 160.229 39.835 1.00 54.84 N
ATOM 21 C2 G A 46 48.337 160.760 38.607 1.00 54.85 C
ATOM 22 N2 G A 46 47.671 159.957 37.765 1.00 54.87 N
ATOM 23 N3 G A 46 48.668 161.983 38.230 1.00 54.56 N
ATOM 24 C4 G A 46 49.342 162.645 39.200 1.00 55.90 C
ATOM 25 P C A 47 48.900 168.352 35.339 1.00 57.41 P
ATOM 26 OP1 C A 47 47.590 168.297 34.642 1.00 58.19 O
ATOM 27 OP2 C A 47 50.136 168.657 34.567 1.00 55.94 O
ATOM 28 O5' C A 47 48.762 169.392 36.537 1.00 57.26 O
TER
ATOM 1 O3' C B 73 41.717 160.761 34.496 1.00 48.97 O
ATOM 2 P G B 74 41.478 160.245 36.005 1.00 50.64 P
ATOM 3 OP1 G B 74 40.028 160.239 36.337 1.00 48.69 O
ATOM 4 OP2 G B 74 42.416 161.008 36.856 1.00 50.49 O
ATOM 5 O5' G B 74 41.957 158.729 35.959 1.00 50.78 O
ATOM 6 C5' G B 74 41.308 157.775 35.097 1.00 51.97 C
ATOM 7 C4' G B 74 41.625 156.368 35.540 1.00 52.90 C
ATOM 8 O4' G B 74 43.051 156.130 35.419 1.00 53.84 O
ATOM 9 C3' G B 74 41.316 156.069 36.993 1.00 53.10 C
ATOM 10 O3' G B 74 39.956 155.722 37.172 1.00 55.44 O
ATOM 11 C2' G B 74 42.249 154.911 37.290 1.00 53.96 C
ATOM 12 O2' G B 74 41.744 153.696 36.785 1.00 54.30 O
ATOM 13 C1' G B 74 43.494 155.320 36.497 1.00 55.12 C
ATOM 14 N9 G B 74 44.461 156.089 37.283 1.00 56.64 N
ATOM 15 C8 G B 74 44.811 157.409 37.111 1.00 57.78 C
ATOM 16 N7 G B 74 45.684 157.828 37.985 1.00 57.30 N
ATOM 17 C5 G B 74 45.933 156.720 38.779 1.00 57.93 C
ATOM 18 C6 G B 74 46.788 156.569 39.895 1.00 57.92 C
ATOM 19 O6 G B 74 47.519 157.409 40.423 1.00 59.21 O
ATOM 20 N1 G B 74 46.736 155.280 40.407 1.00 57.62 N
ATOM 21 C2 G B 74 45.960 154.266 39.912 1.00 57.97 C
ATOM 22 N2 G B 74 46.041 153.094 40.557 1.00 58.67 N
ATOM 23 N3 G B 74 45.160 154.389 38.868 1.00 57.81 N
ATOM 24 C4 G B 74 45.193 155.635 38.355 1.00 57.35 C
ATOM 25 P C B 75 39.236 156.035 38.571 1.00 59.07 P
ATOM 26 OP1 C B 75 37.828 155.585 38.471 1.00 59.83 O
ATOM 27 OP2 C B 75 39.525 157.437 38.945 1.00 59.28 O
ATOM 28 O5' C B 75 39.972 155.070 39.598 1.00 60.97 O
TER
ATOM 2 P G A 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 3 OP1 G A 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 4 OP2 G A 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 5 O5' G A 46 53.104 165.794 37.005 1.00 54.35 O
ATOM 6 C5' G A 46 52.425 165.333 35.839 1.00 53.60 C
ATOM 7 C4' G A 46 50.942 165.385 36.050 1.00 54.27 C
ATOM 8 O4' G A 46 50.546 164.300 36.925 1.00 54.94 O
ATOM 9 C3' G A 46 50.389 166.661 36.675 1.00 54.61 C
ATOM 10 O3' G A 46 49.130 166.945 36.076 1.00 57.10 O
ATOM 11 C2' G A 46 50.173 166.254 38.129 1.00 53.33 C
ATOM 12 O2' G A 46 49.151 166.996 38.755 1.00 52.20 O
ATOM 13 C1' G A 46 49.725 164.809 37.952 1.00 54.40 C
ATOM 14 N9 G A 46 49.838 163.928 39.112 1.00 55.83 N
ATOM 15 C8 G A 46 50.448 164.191 40.316 1.00 55.21 C
ATOM 16 N7 G A 46 50.381 163.190 41.153 1.00 55.12 N
ATOM 17 C5 G A 46 49.689 162.205 40.459 1.00 55.72 C
ATOM 18 C6 G A 46 49.322 160.889 40.848 1.00 54.99 C
ATOM 19 O6 G A 46 49.536 160.316 41.920 1.00 55.21 O
ATOM 20 N1 G A 46 48.635 160.229 39.835 1.00 54.84 N
ATOM 21 C2 G A 46 48.337 160.760 38.607 1.00 54.85 C
ATOM 22 N2 G A 46 47.671 159.957 37.765 1.00 54.87 N
ATOM 23 N3 G A 46 48.668 161.983 38.230 1.00 54.56 N
ATOM 24 C4 G A 46 49.342 162.645 39.200 1.00 55.90 C
ATOM 25 P C A 47 48.900 168.352 35.339 1.00 57.41 P
ATOM 26 OP1 C A 47 47.590 168.297 34.642 1.00 58.19 O
ATOM 27 OP2 C A 47 50.136 168.657 34.567 1.00 55.94 O
ATOM 28 O5' C A 47 48.762 169.392 36.537 1.00 57.26 O
TER
ATOM 1 O3' C B 73 41.717 160.761 34.496 1.00 48.97 O
ATOM 2 P G B 74 41.478 160.245 36.005 1.00 50.64 P
ATOM 3 OP1 G B 74 40.028 160.239 36.337 1.00 48.69 O
ATOM 4 OP2 G B 74 42.416 161.008 36.856 1.00 50.49 O
ATOM 5 O5' G B 74 41.957 158.729 35.959 1.00 50.78 O
ATOM 6 C5' G B 74 41.308 157.775 35.097 1.00 51.97 C
ATOM 7 C4' G B 74 41.625 156.368 35.540 1.00 52.90 C
ATOM 8 O4' G B 74 43.051 156.130 35.419 1.00 53.84 O
ATOM 9 C3' G B 74 41.316 156.069 36.993 1.00 53.10 C
ATOM 10 O3' G B 74 39.956 155.722 37.172 1.00 55.44 O
ATOM 11 C2' G B 74 42.249 154.911 37.290 1.00 53.96 C
ATOM 12 O2' G B 74 41.744 153.696 36.785 1.00 54.30 O
ATOM 13 C1' G B 74 43.494 155.320 36.497 1.00 55.12 C
ATOM 14 N9 G B 74 44.461 156.089 37.283 1.00 56.64 N
ATOM 15 C8 G B 74 44.811 157.409 37.111 1.00 57.78 C
ATOM 16 N7 G B 74 45.684 157.828 37.985 1.00 57.30 N
ATOM 17 C5 G B 74 45.933 156.720 38.779 1.00 57.93 C
ATOM 18 C6 G B 74 46.788 156.569 39.895 1.00 57.92 C
ATOM 19 O6 G B 74 47.519 157.409 40.423 1.00 59.21 O
ATOM 20 N1 G B 74 46.736 155.280 40.407 1.00 57.62 N
ATOM 21 C2 G B 74 45.960 154.266 39.912 1.00 57.97 C
ATOM 22 N2 G B 74 46.041 153.094 40.557 1.00 58.67 N
ATOM 23 N3 G B 74 45.160 154.389 38.868 1.00 57.81 N
ATOM 24 C4 G B 74 45.193 155.635 38.355 1.00 57.35 C
ATOM 25 P C B 75 39.236 156.035 38.571 1.00 59.07 P
ATOM 26 OP1 C B 75 37.828 155.585 38.471 1.00 59.83 O
ATOM 27 OP2 C B 75 39.525 157.437 38.945 1.00 59.28 O
ATOM 28 O5' C B 75 39.972 155.070 39.598 1.00 60.97 O
TER
Atoms:
OP1: (54.244,167.767,36.040)
OP2: (55.102,166.707,38.201)
C3': (50.389,166.661,36.675)
C1': (49.725,164.809,37.952)
C5': (52.425,165.333,35.839)
O6: (49.536,160.316,41.920)
O4': (50.546,164.300,36.925)
C8: (50.448,164.191,40.316)
C2: (48.337,160.760,38.607)
C6: (49.322,160.889,40.848)
C5: (49.689,162.205,40.459)
C4: (49.342,162.645,39.200)
P: (54.487,166.563,36.865)
C4': (50.942,165.385,36.050)
C2': (50.173,166.254,38.129)
O2': (49.151,166.996,38.755)
N1: (48.635,160.229,39.835)
N2: (47.671,159.957,37.765)
N3: (48.668,161.983,38.230)
N7: (50.381,163.190,41.153)
N9: (49.838,163.928,39.112)
O5': (53.104,165.794,37.005)
O3': (49.130,166.945,36.076)
OP2: (55.102,166.707,38.201)
C3': (50.389,166.661,36.675)
C1': (49.725,164.809,37.952)
C5': (52.425,165.333,35.839)
O6: (49.536,160.316,41.920)
O4': (50.546,164.300,36.925)
C8: (50.448,164.191,40.316)
C2: (48.337,160.760,38.607)
C6: (49.322,160.889,40.848)
C5: (49.689,162.205,40.459)
C4: (49.342,162.645,39.200)
P: (54.487,166.563,36.865)
C4': (50.942,165.385,36.050)
C2': (50.173,166.254,38.129)
O2': (49.151,166.996,38.755)
N1: (48.635,160.229,39.835)
N2: (47.671,159.957,37.765)
N3: (48.668,161.983,38.230)
N7: (50.381,163.190,41.153)
N9: (49.838,163.928,39.112)
O5': (53.104,165.794,37.005)
O3': (49.130,166.945,36.076)
OP1: (40.028,160.239,36.337)
OP2: (42.416,161.008,36.856)
C3': (41.316,156.069,36.993)
C1': (43.494,155.320,36.497)
C5': (41.308,157.775,35.097)
O6: (47.519,157.409,40.423)
O4': (43.051,156.130,35.419)
C8: (44.811,157.409,37.111)
C2: (45.960,154.266,39.912)
C6: (46.788,156.569,39.895)
C5: (45.933,156.720,38.779)
C4: (45.193,155.635,38.355)
P: (41.478,160.245,36.005)
C4': (41.625,156.368,35.540)
C2': (42.249,154.911,37.290)
O2': (41.744,153.696,36.785)
N1: (46.736,155.280,40.407)
N2: (46.041,153.094,40.557)
N3: (45.160,154.389,38.868)
N7: (45.684,157.828,37.985)
N9: (44.461,156.089,37.283)
O5': (41.957,158.729,35.959)
O3': (39.956,155.722,37.172)
OP2: (42.416,161.008,36.856)
C3': (41.316,156.069,36.993)
C1': (43.494,155.320,36.497)
C5': (41.308,157.775,35.097)
O6: (47.519,157.409,40.423)
O4': (43.051,156.130,35.419)
C8: (44.811,157.409,37.111)
C2: (45.960,154.266,39.912)
C6: (46.788,156.569,39.895)
C5: (45.933,156.720,38.779)
C4: (45.193,155.635,38.355)
P: (41.478,160.245,36.005)
C4': (41.625,156.368,35.540)
C2': (42.249,154.911,37.290)
O2': (41.744,153.696,36.785)
N1: (46.736,155.280,40.407)
N2: (46.041,153.094,40.557)
N3: (45.160,154.389,38.868)
N7: (45.684,157.828,37.985)
N9: (44.461,156.089,37.283)
O5': (41.957,158.729,35.959)
O3': (39.956,155.722,37.172)
Image (generated by PyMOL):