ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2AWE:C4:A4

Extra

PDB:
ATOM 1 O3' U A 3 36.030 5.870 12.966 1.00 21.20 O
ATOM 2 P G A 4 35.102 5.556 11.686 1.00 18.97 P
ATOM 3 OP1 G A 4 34.285 6.749 11.349 1.00 16.17 O
ATOM 4 OP2 G A 4 34.451 4.254 11.931 1.00 19.75 O
ATOM 5 O5' G A 4 36.238 5.423 10.542 1.00 17.75 O
ATOM 6 C5' G A 4 37.171 4.330 10.543 1.00 18.36 C
ATOM 7 C4' G A 4 37.231 3.621 9.203 1.00 17.30 C
ATOM 8 O4' G A 4 35.928 3.085 8.846 1.00 16.60 O
ATOM 9 C3' G A 4 37.605 4.522 8.024 1.00 18.03 C
ATOM 10 O3' G A 4 39.043 4.697 7.996 1.00 20.30 O
ATOM 11 C2' G A 4 37.062 3.676 6.854 1.00 16.59 C
ATOM 12 O2' G A 4 37.940 2.607 6.506 1.00 16.09 O
ATOM 13 C1' G A 4 35.746 3.131 7.435 1.00 13.59 C
ATOM 14 N9 G A 4 34.559 3.942 7.065 1.00 13.54 N
ATOM 15 C8 G A 4 34.039 5.028 7.755 1.00 13.09 C
ATOM 16 N7 G A 4 32.975 5.552 7.188 1.00 11.58 N
ATOM 17 C5 G A 4 32.793 4.766 6.050 1.00 11.05 C
ATOM 18 C6 G A 4 31.814 4.893 5.013 1.00 10.10 C
ATOM 19 O6 G A 4 30.933 5.740 4.986 1.00 10.46 O
ATOM 20 N1 G A 4 31.909 3.950 3.965 1.00 9.12 N
ATOM 21 C2 G A 4 32.910 2.977 3.956 1.00 12.09 C
ATOM 22 N2 G A 4 32.880 2.129 2.895 1.00 11.50 N
ATOM 23 N3 G A 4 33.864 2.847 4.922 1.00 9.96 N
ATOM 24 C4 G A 4 33.747 3.776 5.941 1.00 10.90 C
ATOM 25 P U A 5 39.758 6.029 7.472 1.00 22.18 P
ATOM 26 OP1 U A 5 39.462 6.204 6.024 1.00 22.69 O
ATOM 27 OP2 U A 5 41.176 6.010 7.902 1.00 25.46 O
ATOM 28 O5' U A 5 38.994 7.157 8.284 1.00 22.11 O
TER

ATOM 1 O3' U B 3 34.167 -3.542 -0.695 1.00 14.14 O
ATOM 2 P G B 4 33.262 -2.213 -0.453 1.00 15.47 P
ATOM 3 OP1 G B 4 33.785 -1.387 0.706 1.00 12.69 O
ATOM 4 OP2 G B 4 31.833 -2.587 -0.491 1.00 12.19 O
ATOM 5 O5' G B 4 33.702 -1.595 -1.862 1.00 15.01 O
ATOM 6 C5' G B 4 33.356 -0.361 -2.166 1.00 20.14 C
ATOM 7 C4' G B 4 32.610 -0.234 -3.475 1.00 17.01 C
ATOM 8 O4' G B 4 31.184 -0.072 -3.183 1.00 15.02 O
ATOM 9 C3' G B 4 33.113 1.124 -3.927 1.00 15.61 C
ATOM 10 O3' G B 4 34.069 1.031 -5.049 1.00 16.64 O
ATOM 11 C2' G B 4 31.832 1.932 -4.153 1.00 14.59 C
ATOM 12 O2' G B 4 31.452 1.787 -5.519 1.00 14.97 O
ATOM 13 C1' G B 4 30.831 1.291 -3.172 1.00 14.12 C
ATOM 14 N9 G B 4 30.784 1.844 -1.777 1.00 13.30 N
ATOM 15 C8 G B 4 31.486 1.473 -0.624 1.00 13.07 C
ATOM 16 N7 G B 4 31.237 2.210 0.459 1.00 11.89 N
ATOM 17 C5 G B 4 30.313 3.148 -0.015 1.00 12.41 C
ATOM 18 C6 G B 4 29.665 4.214 0.654 1.00 12.94 C
ATOM 19 O6 G B 4 29.802 4.523 1.867 1.00 14.18 O
ATOM 20 N1 G B 4 28.802 4.963 -0.187 1.00 10.22 N
ATOM 21 C2 G B 4 28.625 4.684 -1.540 1.00 11.41 C
ATOM 22 N2 G B 4 27.773 5.448 -2.246 1.00 11.66 N
ATOM 23 N3 G B 4 29.223 3.682 -2.177 1.00 11.38 N
ATOM 24 C4 G B 4 30.040 2.945 -1.373 1.00 12.52 C
ATOM 25 P U B 5 35.368 1.993 -5.012 1.00 19.62 P
ATOM 26 OP1 U B 5 34.895 3.320 -4.564 1.00 17.79 O
ATOM 27 OP2 U B 5 36.141 1.868 -6.248 1.00 15.17 O
ATOM 28 O5' U B 5 36.259 1.343 -3.841 1.00 17.10 O
TER

Atoms:
OP1: (34.285,6.749,11.349)
OP2: (34.451,4.254,11.931)
C3': (37.605,4.522,8.024)
C1': (35.746,3.131,7.435)
C5': (37.171,4.330,10.543)
O6: (30.933,5.740,4.986)
O4': (35.928,3.085,8.846)
C8: (34.039,5.028,7.755)
C2: (32.910,2.977,3.956)
C6: (31.814,4.893,5.013)
C5: (32.793,4.766,6.050)
C4: (33.747,3.776,5.941)
P: (35.102,5.556,11.686)
C4': (37.231,3.621,9.203)
C2': (37.062,3.676,6.854)
O2': (37.940,2.607,6.506)
N1: (31.909,3.950,3.965)
N2: (32.880,2.129,2.895)
N3: (33.864,2.847,4.922)
N7: (32.975,5.552,7.188)
N9: (34.559,3.942,7.065)
O5': (36.238,5.423,10.542)
O3': (39.043,4.697,7.996)
OP1: (33.785,-1.387,0.706)
OP2: (31.833,-2.587,-0.491)
C3': (33.113,1.124,-3.927)
C1': (30.831,1.291,-3.172)
C5': (33.356,-0.361,-2.166)
O6: (29.802,4.523,1.867)
O4': (31.184,-0.072,-3.183)
C8: (31.486,1.473,-0.624)
C2: (28.625,4.684,-1.540)
C6: (29.665,4.214,0.654)
C5: (30.313,3.148,-0.015)
C4: (30.040,2.945,-1.373)
P: (33.262,-2.213,-0.453)
C4': (32.610,-0.234,-3.475)
C2': (31.832,1.932,-4.153)
O2': (31.452,1.787,-5.519)
N1: (28.802,4.963,-0.187)
N2: (27.773,5.448,-2.246)
N3: (29.223,3.682,-2.177)
N7: (31.237,2.210,0.459)
N9: (30.784,1.844,-1.777)
O5': (33.702,-1.595,-1.862)
O3': (34.069,1.031,-5.049)
Image (generated by PyMOL):
PyMOL image
show in jmol