ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2AWE:E2:H2

Extra

PDB:
ATOM 1 P G A 2 12.658 -8.761 1.540 1.00 21.90 P
ATOM 2 OP1 G A 2 12.898 -9.606 0.337 1.00 18.62 O
ATOM 3 OP2 G A 2 11.350 -8.094 1.726 1.00 18.17 O
ATOM 4 O5' G A 2 12.873 -9.611 2.908 1.00 19.39 O
ATOM 5 C5' G A 2 13.827 -10.660 3.036 1.00 20.18 C
ATOM 6 C4' G A 2 14.005 -11.099 4.490 1.00 19.85 C
ATOM 7 O4' G A 2 14.279 -9.945 5.300 1.00 18.06 O
ATOM 8 C3' G A 2 12.827 -11.814 5.179 1.00 19.49 C
ATOM 9 O3' G A 2 13.155 -13.182 5.527 1.00 23.69 O
ATOM 10 C2' G A 2 12.577 -10.958 6.434 1.00 16.71 C
ATOM 11 O2' G A 2 12.197 -11.727 7.559 1.00 16.27 O
ATOM 12 C1' G A 2 13.900 -10.223 6.640 1.00 16.75 C
ATOM 13 N9 G A 2 13.832 -8.931 7.394 1.00 16.50 N
ATOM 14 C8 G A 2 13.032 -7.842 7.093 1.00 14.92 C
ATOM 15 N7 G A 2 13.158 -6.810 7.912 1.00 15.00 N
ATOM 16 C5 G A 2 14.129 -7.228 8.811 1.00 14.70 C
ATOM 17 C6 G A 2 14.680 -6.547 9.933 1.00 15.20 C
ATOM 18 O6 G A 2 14.410 -5.389 10.363 1.00 13.86 O
ATOM 19 N1 G A 2 15.628 -7.332 10.611 1.00 13.20 N
ATOM 20 C2 G A 2 15.977 -8.614 10.241 1.00 15.69 C
ATOM 21 N2 G A 2 16.918 -9.218 10.988 1.00 14.06 N
ATOM 22 N3 G A 2 15.458 -9.255 9.193 1.00 14.85 N
ATOM 23 C4 G A 2 14.531 -8.532 8.526 1.00 14.84 C
ATOM 24 P U A 3 13.094 -14.446 4.496 1.00 25.28 P
ATOM 25 OP1 U A 3 14.460 -14.679 3.996 1.00 24.19 O
ATOM 26 OP2 U A 3 11.975 -14.229 3.565 1.00 26.98 O
ATOM 27 O5' U A 3 12.737 -15.694 5.450 1.00 27.49 O
TER

ATOM 1 P G B 2 23.189 -12.406 14.495 1.00 21.58 P
ATOM 2 OP1 G B 2 24.382 -13.099 15.046 1.00 23.89 O
ATOM 3 OP2 G B 2 22.276 -13.140 13.603 1.00 20.14 O
ATOM 4 O5' G B 2 22.289 -11.751 15.657 1.00 22.55 O
ATOM 5 C5' G B 2 22.786 -10.958 16.750 1.00 19.48 C
ATOM 6 C4' G B 2 21.601 -10.287 17.452 1.00 20.68 C
ATOM 7 O4' G B 2 20.951 -9.366 16.517 1.00 19.21 O
ATOM 8 C3' G B 2 20.465 -11.196 17.947 1.00 18.70 C
ATOM 9 O3' G B 2 20.367 -11.274 19.383 1.00 23.14 O
ATOM 10 C2' G B 2 19.208 -10.541 17.368 1.00 16.79 C
ATOM 11 O2' G B 2 18.155 -10.467 18.306 1.00 20.38 O
ATOM 12 C1' G B 2 19.659 -9.126 17.015 1.00 16.50 C
ATOM 13 N9 G B 2 18.865 -8.466 15.965 1.00 15.03 N
ATOM 14 C8 G B 2 18.570 -9.027 14.725 1.00 15.33 C
ATOM 15 N7 G B 2 17.843 -8.284 13.928 1.00 12.40 N
ATOM 16 C5 G B 2 17.662 -7.137 14.713 1.00 12.96 C
ATOM 17 C6 G B 2 16.966 -5.958 14.390 1.00 12.95 C
ATOM 18 O6 G B 2 16.349 -5.688 13.349 1.00 12.77 O
ATOM 19 N1 G B 2 16.988 -5.017 15.422 1.00 13.63 N
ATOM 20 C2 G B 2 17.610 -5.144 16.640 1.00 13.94 C
ATOM 21 N2 G B 2 17.480 -4.056 17.458 1.00 11.98 N
ATOM 22 N3 G B 2 18.293 -6.255 16.963 1.00 13.49 N
ATOM 23 C4 G B 2 18.275 -7.213 15.963 1.00 13.37 C
ATOM 24 P U B 3 21.004 -12.492 20.223 1.00 27.43 P
ATOM 25 OP1 U B 3 22.460 -12.237 20.329 1.00 27.82 O
ATOM 26 OP2 U B 3 20.482 -13.772 19.700 1.00 26.40 O
ATOM 27 O5' U B 3 20.423 -12.308 21.700 1.00 29.37 O
TER

Atoms:
OP1: (12.898,-9.606,0.337)
OP2: (11.350,-8.094,1.726)
C3': (12.827,-11.814,5.179)
C1': (13.900,-10.223,6.640)
C5': (13.827,-10.660,3.036)
O6: (14.410,-5.389,10.363)
O4': (14.279,-9.945,5.300)
C8: (13.032,-7.842,7.093)
C2: (15.977,-8.614,10.241)
C6: (14.680,-6.547,9.933)
C5: (14.129,-7.228,8.811)
C4: (14.531,-8.532,8.526)
P: (12.658,-8.761,1.540)
C4': (14.005,-11.099,4.490)
C2': (12.577,-10.958,6.434)
O2': (12.197,-11.727,7.559)
N1: (15.628,-7.332,10.611)
N2: (16.918,-9.218,10.988)
N3: (15.458,-9.255,9.193)
N7: (13.158,-6.810,7.912)
N9: (13.832,-8.931,7.394)
O5': (12.873,-9.611,2.908)
O3': (13.155,-13.182,5.527)
OP1: (24.382,-13.099,15.046)
OP2: (22.276,-13.140,13.603)
C3': (20.465,-11.196,17.947)
C1': (19.659,-9.126,17.015)
C5': (22.786,-10.958,16.750)
O6: (16.349,-5.688,13.349)
O4': (20.951,-9.366,16.517)
C8: (18.570,-9.027,14.725)
C2: (17.610,-5.144,16.640)
C6: (16.966,-5.958,14.390)
C5: (17.662,-7.137,14.713)
C4: (18.275,-7.213,15.963)
P: (23.189,-12.406,14.495)
C4': (21.601,-10.287,17.452)
C2': (19.208,-10.541,17.368)
O2': (18.155,-10.467,18.306)
N1: (16.988,-5.017,15.422)
N2: (17.480,-4.056,17.458)
N3: (18.293,-6.255,16.963)
N7: (17.843,-8.284,13.928)
N9: (18.865,-8.466,15.965)
O5': (22.289,-11.751,15.657)
O3': (20.367,-11.274,19.383)
Image (generated by PyMOL):
PyMOL image
show in jmol