ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2AWE:H2:F2

Extra

PDB:
ATOM 1 P G A 2 23.189 -12.406 14.495 1.00 21.58 P
ATOM 2 OP1 G A 2 24.382 -13.099 15.046 1.00 23.89 O
ATOM 3 OP2 G A 2 22.276 -13.140 13.603 1.00 20.14 O
ATOM 4 O5' G A 2 22.289 -11.751 15.657 1.00 22.55 O
ATOM 5 C5' G A 2 22.786 -10.958 16.750 1.00 19.48 C
ATOM 6 C4' G A 2 21.601 -10.287 17.452 1.00 20.68 C
ATOM 7 O4' G A 2 20.951 -9.366 16.517 1.00 19.21 O
ATOM 8 C3' G A 2 20.465 -11.196 17.947 1.00 18.70 C
ATOM 9 O3' G A 2 20.367 -11.274 19.383 1.00 23.14 O
ATOM 10 C2' G A 2 19.208 -10.541 17.368 1.00 16.79 C
ATOM 11 O2' G A 2 18.155 -10.467 18.306 1.00 20.38 O
ATOM 12 C1' G A 2 19.659 -9.126 17.015 1.00 16.50 C
ATOM 13 N9 G A 2 18.865 -8.466 15.965 1.00 15.03 N
ATOM 14 C8 G A 2 18.570 -9.027 14.725 1.00 15.33 C
ATOM 15 N7 G A 2 17.843 -8.284 13.928 1.00 12.40 N
ATOM 16 C5 G A 2 17.662 -7.137 14.713 1.00 12.96 C
ATOM 17 C6 G A 2 16.966 -5.958 14.390 1.00 12.95 C
ATOM 18 O6 G A 2 16.349 -5.688 13.349 1.00 12.77 O
ATOM 19 N1 G A 2 16.988 -5.017 15.422 1.00 13.63 N
ATOM 20 C2 G A 2 17.610 -5.144 16.640 1.00 13.94 C
ATOM 21 N2 G A 2 17.480 -4.056 17.458 1.00 11.98 N
ATOM 22 N3 G A 2 18.293 -6.255 16.963 1.00 13.49 N
ATOM 23 C4 G A 2 18.275 -7.213 15.963 1.00 13.37 C
ATOM 24 P U A 3 21.004 -12.492 20.223 1.00 27.43 P
ATOM 25 OP1 U A 3 22.460 -12.237 20.329 1.00 27.82 O
ATOM 26 OP2 U A 3 20.482 -13.772 19.700 1.00 26.40 O
ATOM 27 O5' U A 3 20.423 -12.308 21.700 1.00 29.37 O
TER

ATOM 1 P G B 2 18.280 2.356 22.304 1.00 22.05 P
ATOM 2 OP1 G B 2 18.361 3.493 23.248 1.00 21.31 O
ATOM 3 OP2 G B 2 18.510 0.986 22.743 1.00 18.45 O
ATOM 4 O5' G B 2 16.822 2.397 21.637 1.00 20.95 O
ATOM 5 C5' G B 2 16.254 3.580 21.054 1.00 18.57 C
ATOM 6 C4' G B 2 15.025 3.220 20.237 1.00 19.32 C
ATOM 7 O4' G B 2 15.408 2.330 19.134 1.00 16.74 O
ATOM 8 C3' G B 2 13.923 2.493 21.027 1.00 19.71 C
ATOM 9 O3' G B 2 12.687 3.270 21.079 1.00 23.51 O
ATOM 10 C2' G B 2 13.777 1.168 20.270 1.00 19.27 C
ATOM 11 O2' G B 2 12.428 0.691 20.281 1.00 19.60 O
ATOM 12 C1' G B 2 14.271 1.528 18.852 1.00 16.04 C
ATOM 13 N9 G B 2 14.616 0.403 17.953 1.00 15.36 N
ATOM 14 C8 G B 2 15.545 -0.601 18.235 1.00 14.80 C
ATOM 15 N7 G B 2 15.690 -1.479 17.275 1.00 14.89 N
ATOM 16 C5 G B 2 14.807 -1.032 16.277 1.00 13.41 C
ATOM 17 C6 G B 2 14.535 -1.605 15.004 1.00 15.23 C
ATOM 18 O6 G B 2 15.035 -2.639 14.503 1.00 16.79 O
ATOM 19 N1 G B 2 13.585 -0.895 14.257 1.00 13.43 N
ATOM 20 C2 G B 2 12.981 0.260 14.707 1.00 13.08 C
ATOM 21 N2 G B 2 12.114 0.794 13.844 1.00 11.23 N
ATOM 22 N3 G B 2 13.226 0.814 15.916 1.00 12.85 N
ATOM 23 C4 G B 2 14.146 0.117 16.660 1.00 12.42 C
ATOM 24 P U B 3 11.991 3.674 22.504 1.00 30.01 P
ATOM 25 OP1 U B 3 13.030 4.253 23.379 1.00 30.34 O
ATOM 26 OP2 U B 3 11.247 2.477 22.971 1.00 30.88 O
ATOM 27 O5' U B 3 10.896 4.782 22.133 1.00 27.10 O
TER

Atoms:
OP1: (24.382,-13.099,15.046)
OP2: (22.276,-13.140,13.603)
C3': (20.465,-11.196,17.947)
C1': (19.659,-9.126,17.015)
C5': (22.786,-10.958,16.750)
O6: (16.349,-5.688,13.349)
O4': (20.951,-9.366,16.517)
C8: (18.570,-9.027,14.725)
C2: (17.610,-5.144,16.640)
C6: (16.966,-5.958,14.390)
C5: (17.662,-7.137,14.713)
C4: (18.275,-7.213,15.963)
P: (23.189,-12.406,14.495)
C4': (21.601,-10.287,17.452)
C2': (19.208,-10.541,17.368)
O2': (18.155,-10.467,18.306)
N1: (16.988,-5.017,15.422)
N2: (17.480,-4.056,17.458)
N3: (18.293,-6.255,16.963)
N7: (17.843,-8.284,13.928)
N9: (18.865,-8.466,15.965)
O5': (22.289,-11.751,15.657)
O3': (20.367,-11.274,19.383)
OP1: (18.361,3.493,23.248)
OP2: (18.510,0.986,22.743)
C3': (13.923,2.493,21.027)
C1': (14.271,1.528,18.852)
C5': (16.254,3.580,21.054)
O6: (15.035,-2.639,14.503)
O4': (15.408,2.330,19.134)
C8: (15.545,-0.601,18.235)
C2: (12.981,0.260,14.707)
C6: (14.535,-1.605,15.004)
C5: (14.807,-1.032,16.277)
C4: (14.146,0.117,16.660)
P: (18.280,2.356,22.304)
C4': (15.025,3.220,20.237)
C2': (13.777,1.168,20.270)
O2': (12.428,0.691,20.281)
N1: (13.585,-0.895,14.257)
N2: (12.114,0.794,13.844)
N3: (13.226,0.814,15.916)
N7: (15.690,-1.479,17.275)
N9: (14.616,0.403,17.953)
O5': (16.822,2.397,21.637)
O3': (12.687,3.270,21.079)
Image (generated by PyMOL):
PyMOL image
show in jmol