Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:X50:X68
Extra
PDB:
ATOM 1 O3' U A 49 -31.146 -7.371 7.155 1.00 33.14 O
ATOM 2 P G A 50 -30.741 -8.192 8.468 1.00 33.73 P
ATOM 3 OP1 G A 50 -31.074 -7.370 9.649 1.00 34.29 O
ATOM 4 OP2 G A 50 -29.359 -8.691 8.283 1.00 32.95 O
ATOM 5 O5' G A 50 -31.706 -9.470 8.425 1.00 33.47 O
ATOM 6 C5' G A 50 -33.112 -9.343 8.605 1.00 33.32 C
ATOM 7 C4' G A 50 -33.812 -10.623 8.178 1.00 32.85 C
ATOM 8 O4' G A 50 -33.618 -10.796 6.750 1.00 32.55 O
ATOM 9 C3' G A 50 -33.267 -11.903 8.801 1.00 33.48 C
ATOM 10 O3' G A 50 -33.981 -12.224 9.980 1.00 36.31 O
ATOM 11 C2' G A 50 -33.573 -12.946 7.732 1.00 32.30 C
ATOM 12 O2' G A 50 -34.902 -13.415 7.828 1.00 32.16 O
ATOM 13 C1' G A 50 -33.400 -12.160 6.439 1.00 31.14 C
ATOM 14 N9 G A 50 -32.078 -12.299 5.836 1.00 30.52 N
ATOM 15 C8 G A 50 -30.938 -11.621 6.193 1.00 29.95 C
ATOM 16 N7 G A 50 -29.901 -11.928 5.472 1.00 30.09 N
ATOM 17 C5 G A 50 -30.386 -12.879 4.588 1.00 29.93 C
ATOM 18 C6 G A 50 -29.710 -13.582 3.571 1.00 29.75 C
ATOM 19 O6 G A 50 -28.527 -13.461 3.267 1.00 29.40 O
ATOM 20 N1 G A 50 -30.537 -14.463 2.882 1.00 28.74 N
ATOM 21 C2 G A 50 -31.874 -14.630 3.155 1.00 28.83 C
ATOM 22 N2 G A 50 -32.530 -15.521 2.397 1.00 27.85 N
ATOM 23 N3 G A 50 -32.522 -13.975 4.111 1.00 29.01 N
ATOM 24 C4 G A 50 -31.719 -13.122 4.791 1.00 29.48 C
ATOM 25 P A A 51 -33.450 -11.844 11.439 1.00 38.01 P
ATOM 26 OP1 A A 51 -33.906 -12.913 12.354 1.00 37.79 O
ATOM 27 OP2 A A 51 -33.821 -10.438 11.707 1.00 38.84 O
ATOM 28 O5' A A 51 -31.859 -11.906 11.324 1.00 36.91 O
TER
ATOM 1 O3' C B 67 -34.975 -19.931 0.976 1.00 31.00 O
ATOM 2 P G B 68 -35.367 -19.163 -0.373 1.00 31.90 P
ATOM 3 OP1 G B 68 -34.871 -17.774 -0.264 1.00 32.59 O
ATOM 4 OP2 G B 68 -36.801 -19.406 -0.635 1.00 30.61 O
ATOM 5 O5' G B 68 -34.520 -19.931 -1.494 1.00 31.49 O
ATOM 6 C5' G B 68 -34.840 -19.763 -2.879 1.00 32.92 C
ATOM 7 C4' G B 68 -33.595 -19.658 -3.753 1.00 32.99 C
ATOM 8 O4' G B 68 -32.823 -18.481 -3.396 1.00 32.44 O
ATOM 9 C3' G B 68 -32.610 -20.820 -3.670 1.00 34.13 C
ATOM 10 O3' G B 68 -31.895 -20.924 -4.898 1.00 37.41 O
ATOM 11 C2' G B 68 -31.672 -20.332 -2.573 1.00 32.95 C
ATOM 12 O2' G B 68 -30.413 -20.978 -2.580 1.00 31.28 O
ATOM 13 C1' G B 68 -31.524 -18.880 -3.004 1.00 31.86 C
ATOM 14 N9 G B 68 -31.068 -18.023 -1.920 1.00 31.02 N
ATOM 15 C8 G B 68 -31.806 -17.599 -0.842 1.00 30.38 C
ATOM 16 N7 G B 68 -31.140 -16.832 -0.026 1.00 29.01 N
ATOM 17 C5 G B 68 -29.877 -16.752 -0.598 1.00 30.31 C
ATOM 18 C6 G B 68 -28.730 -16.059 -0.157 1.00 29.75 C
ATOM 19 O6 G B 68 -28.608 -15.367 0.858 1.00 30.66 O
ATOM 20 N1 G B 68 -27.655 -16.226 -1.025 1.00 29.94 N
ATOM 21 C2 G B 68 -27.686 -16.967 -2.181 1.00 30.94 C
ATOM 22 N2 G B 68 -26.541 -17.002 -2.881 1.00 30.76 N
ATOM 23 N3 G B 68 -28.756 -17.629 -2.608 1.00 29.93 N
ATOM 24 C4 G B 68 -29.812 -17.474 -1.769 1.00 30.39 C
ATOM 25 P U B 69 -32.181 -22.093 -5.952 1.00 40.35 P
ATOM 26 OP1 U B 69 -33.099 -23.079 -5.336 1.00 40.34 O
ATOM 27 OP2 U B 69 -30.882 -22.541 -6.500 1.00 41.22 O
ATOM 28 O5' U B 69 -32.943 -21.321 -7.121 1.00 42.38 O
TER
ATOM 2 P G A 50 -30.741 -8.192 8.468 1.00 33.73 P
ATOM 3 OP1 G A 50 -31.074 -7.370 9.649 1.00 34.29 O
ATOM 4 OP2 G A 50 -29.359 -8.691 8.283 1.00 32.95 O
ATOM 5 O5' G A 50 -31.706 -9.470 8.425 1.00 33.47 O
ATOM 6 C5' G A 50 -33.112 -9.343 8.605 1.00 33.32 C
ATOM 7 C4' G A 50 -33.812 -10.623 8.178 1.00 32.85 C
ATOM 8 O4' G A 50 -33.618 -10.796 6.750 1.00 32.55 O
ATOM 9 C3' G A 50 -33.267 -11.903 8.801 1.00 33.48 C
ATOM 10 O3' G A 50 -33.981 -12.224 9.980 1.00 36.31 O
ATOM 11 C2' G A 50 -33.573 -12.946 7.732 1.00 32.30 C
ATOM 12 O2' G A 50 -34.902 -13.415 7.828 1.00 32.16 O
ATOM 13 C1' G A 50 -33.400 -12.160 6.439 1.00 31.14 C
ATOM 14 N9 G A 50 -32.078 -12.299 5.836 1.00 30.52 N
ATOM 15 C8 G A 50 -30.938 -11.621 6.193 1.00 29.95 C
ATOM 16 N7 G A 50 -29.901 -11.928 5.472 1.00 30.09 N
ATOM 17 C5 G A 50 -30.386 -12.879 4.588 1.00 29.93 C
ATOM 18 C6 G A 50 -29.710 -13.582 3.571 1.00 29.75 C
ATOM 19 O6 G A 50 -28.527 -13.461 3.267 1.00 29.40 O
ATOM 20 N1 G A 50 -30.537 -14.463 2.882 1.00 28.74 N
ATOM 21 C2 G A 50 -31.874 -14.630 3.155 1.00 28.83 C
ATOM 22 N2 G A 50 -32.530 -15.521 2.397 1.00 27.85 N
ATOM 23 N3 G A 50 -32.522 -13.975 4.111 1.00 29.01 N
ATOM 24 C4 G A 50 -31.719 -13.122 4.791 1.00 29.48 C
ATOM 25 P A A 51 -33.450 -11.844 11.439 1.00 38.01 P
ATOM 26 OP1 A A 51 -33.906 -12.913 12.354 1.00 37.79 O
ATOM 27 OP2 A A 51 -33.821 -10.438 11.707 1.00 38.84 O
ATOM 28 O5' A A 51 -31.859 -11.906 11.324 1.00 36.91 O
TER
ATOM 1 O3' C B 67 -34.975 -19.931 0.976 1.00 31.00 O
ATOM 2 P G B 68 -35.367 -19.163 -0.373 1.00 31.90 P
ATOM 3 OP1 G B 68 -34.871 -17.774 -0.264 1.00 32.59 O
ATOM 4 OP2 G B 68 -36.801 -19.406 -0.635 1.00 30.61 O
ATOM 5 O5' G B 68 -34.520 -19.931 -1.494 1.00 31.49 O
ATOM 6 C5' G B 68 -34.840 -19.763 -2.879 1.00 32.92 C
ATOM 7 C4' G B 68 -33.595 -19.658 -3.753 1.00 32.99 C
ATOM 8 O4' G B 68 -32.823 -18.481 -3.396 1.00 32.44 O
ATOM 9 C3' G B 68 -32.610 -20.820 -3.670 1.00 34.13 C
ATOM 10 O3' G B 68 -31.895 -20.924 -4.898 1.00 37.41 O
ATOM 11 C2' G B 68 -31.672 -20.332 -2.573 1.00 32.95 C
ATOM 12 O2' G B 68 -30.413 -20.978 -2.580 1.00 31.28 O
ATOM 13 C1' G B 68 -31.524 -18.880 -3.004 1.00 31.86 C
ATOM 14 N9 G B 68 -31.068 -18.023 -1.920 1.00 31.02 N
ATOM 15 C8 G B 68 -31.806 -17.599 -0.842 1.00 30.38 C
ATOM 16 N7 G B 68 -31.140 -16.832 -0.026 1.00 29.01 N
ATOM 17 C5 G B 68 -29.877 -16.752 -0.598 1.00 30.31 C
ATOM 18 C6 G B 68 -28.730 -16.059 -0.157 1.00 29.75 C
ATOM 19 O6 G B 68 -28.608 -15.367 0.858 1.00 30.66 O
ATOM 20 N1 G B 68 -27.655 -16.226 -1.025 1.00 29.94 N
ATOM 21 C2 G B 68 -27.686 -16.967 -2.181 1.00 30.94 C
ATOM 22 N2 G B 68 -26.541 -17.002 -2.881 1.00 30.76 N
ATOM 23 N3 G B 68 -28.756 -17.629 -2.608 1.00 29.93 N
ATOM 24 C4 G B 68 -29.812 -17.474 -1.769 1.00 30.39 C
ATOM 25 P U B 69 -32.181 -22.093 -5.952 1.00 40.35 P
ATOM 26 OP1 U B 69 -33.099 -23.079 -5.336 1.00 40.34 O
ATOM 27 OP2 U B 69 -30.882 -22.541 -6.500 1.00 41.22 O
ATOM 28 O5' U B 69 -32.943 -21.321 -7.121 1.00 42.38 O
TER
Atoms:
OP1: (-31.074,-7.370,9.649)
OP2: (-29.359,-8.691,8.283)
C3': (-33.267,-11.903,8.801)
C1': (-33.400,-12.160,6.439)
C5': (-33.112,-9.343,8.605)
O6: (-28.527,-13.461,3.267)
O4': (-33.618,-10.796,6.750)
C8: (-30.938,-11.621,6.193)
C2: (-31.874,-14.630,3.155)
C6: (-29.710,-13.582,3.571)
C5: (-30.386,-12.879,4.588)
C4: (-31.719,-13.122,4.791)
P: (-30.741,-8.192,8.468)
C4': (-33.812,-10.623,8.178)
C2': (-33.573,-12.946,7.732)
O2': (-34.902,-13.415,7.828)
N1: (-30.537,-14.463,2.882)
N2: (-32.530,-15.521,2.397)
N3: (-32.522,-13.975,4.111)
N7: (-29.901,-11.928,5.472)
N9: (-32.078,-12.299,5.836)
O5': (-31.706,-9.470,8.425)
O3': (-33.981,-12.224,9.980)
OP2: (-29.359,-8.691,8.283)
C3': (-33.267,-11.903,8.801)
C1': (-33.400,-12.160,6.439)
C5': (-33.112,-9.343,8.605)
O6: (-28.527,-13.461,3.267)
O4': (-33.618,-10.796,6.750)
C8: (-30.938,-11.621,6.193)
C2: (-31.874,-14.630,3.155)
C6: (-29.710,-13.582,3.571)
C5: (-30.386,-12.879,4.588)
C4: (-31.719,-13.122,4.791)
P: (-30.741,-8.192,8.468)
C4': (-33.812,-10.623,8.178)
C2': (-33.573,-12.946,7.732)
O2': (-34.902,-13.415,7.828)
N1: (-30.537,-14.463,2.882)
N2: (-32.530,-15.521,2.397)
N3: (-32.522,-13.975,4.111)
N7: (-29.901,-11.928,5.472)
N9: (-32.078,-12.299,5.836)
O5': (-31.706,-9.470,8.425)
O3': (-33.981,-12.224,9.980)
OP1: (-34.871,-17.774,-0.264)
OP2: (-36.801,-19.406,-0.635)
C3': (-32.610,-20.820,-3.670)
C1': (-31.524,-18.880,-3.004)
C5': (-34.840,-19.763,-2.879)
O6: (-28.608,-15.367,0.858)
O4': (-32.823,-18.481,-3.396)
C8: (-31.806,-17.599,-0.842)
C2: (-27.686,-16.967,-2.181)
C6: (-28.730,-16.059,-0.157)
C5: (-29.877,-16.752,-0.598)
C4: (-29.812,-17.474,-1.769)
P: (-35.367,-19.163,-0.373)
C4': (-33.595,-19.658,-3.753)
C2': (-31.672,-20.332,-2.573)
O2': (-30.413,-20.978,-2.580)
N1: (-27.655,-16.226,-1.025)
N2: (-26.541,-17.002,-2.881)
N3: (-28.756,-17.629,-2.608)
N7: (-31.140,-16.832,-0.026)
N9: (-31.068,-18.023,-1.920)
O5': (-34.520,-19.931,-1.494)
O3': (-31.895,-20.924,-4.898)
OP2: (-36.801,-19.406,-0.635)
C3': (-32.610,-20.820,-3.670)
C1': (-31.524,-18.880,-3.004)
C5': (-34.840,-19.763,-2.879)
O6: (-28.608,-15.367,0.858)
O4': (-32.823,-18.481,-3.396)
C8: (-31.806,-17.599,-0.842)
C2: (-27.686,-16.967,-2.181)
C6: (-28.730,-16.059,-0.157)
C5: (-29.877,-16.752,-0.598)
C4: (-29.812,-17.474,-1.769)
P: (-35.367,-19.163,-0.373)
C4': (-33.595,-19.658,-3.753)
C2': (-31.672,-20.332,-2.573)
O2': (-30.413,-20.978,-2.580)
N1: (-27.655,-16.226,-1.025)
N2: (-26.541,-17.002,-2.881)
N3: (-28.756,-17.629,-2.608)
N7: (-31.140,-16.832,-0.026)
N9: (-31.068,-18.023,-1.920)
O5': (-34.520,-19.931,-1.494)
O3': (-31.895,-20.924,-4.898)
Image (generated by PyMOL):