Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y50:Y68
Extra
PDB:
ATOM 1 O3' U A 49 5.551 4.207 65.680 1.00 36.38 O
ATOM 2 P G A 50 4.267 4.742 64.892 1.00 36.51 P
ATOM 3 OP1 G A 50 3.249 3.668 64.901 1.00 36.86 O
ATOM 4 OP2 G A 50 4.731 5.316 63.610 1.00 35.75 O
ATOM 5 O5' G A 50 3.748 5.939 65.819 1.00 36.63 O
ATOM 6 C5' G A 50 3.217 5.645 67.103 1.00 36.90 C
ATOM 7 C4' G A 50 3.283 6.861 68.008 1.00 37.29 C
ATOM 8 O4' G A 50 4.666 7.227 68.232 1.00 36.66 O
ATOM 9 C3' G A 50 2.629 8.116 67.450 1.00 37.54 C
ATOM 10 O3' G A 50 1.244 8.113 67.774 1.00 39.32 O
ATOM 11 C2' G A 50 3.374 9.213 68.207 1.00 36.79 C
ATOM 12 O2' G A 50 2.838 9.446 69.496 1.00 35.65 O
ATOM 13 C1' G A 50 4.781 8.632 68.331 1.00 35.73 C
ATOM 14 N9 G A 50 5.697 9.101 67.294 1.00 35.51 N
ATOM 15 C8 G A 50 5.851 8.581 66.032 1.00 35.06 C
ATOM 16 N7 G A 50 6.746 9.207 65.319 1.00 34.75 N
ATOM 17 C5 G A 50 7.213 10.207 66.162 1.00 34.58 C
ATOM 18 C6 G A 50 8.195 11.200 65.938 1.00 34.26 C
ATOM 19 O6 G A 50 8.860 11.394 64.913 1.00 33.65 O
ATOM 20 N1 G A 50 8.375 12.017 67.052 1.00 34.27 N
ATOM 21 C2 G A 50 7.690 11.885 68.235 1.00 34.50 C
ATOM 22 N2 G A 50 7.997 12.765 69.198 1.00 34.74 N
ATOM 23 N3 G A 50 6.767 10.956 68.459 1.00 34.62 N
ATOM 24 C4 G A 50 6.580 10.155 67.382 1.00 34.84 C
ATOM 25 P A A 51 0.103 8.025 66.652 1.00 40.31 P
ATOM 26 OP1 A A 51 -0.565 9.346 66.589 1.00 40.43 O
ATOM 27 OP2 A A 51 -0.689 6.808 66.941 1.00 40.76 O
ATOM 28 O5' A A 51 0.884 7.782 65.278 1.00 40.81 O
TER
ATOM 1 O3' C B 67 7.661 17.334 72.401 1.00 32.89 O
ATOM 2 P G B 68 8.886 16.682 73.196 1.00 34.23 P
ATOM 3 OP1 G B 68 9.135 15.343 72.608 1.00 33.34 O
ATOM 4 OP2 G B 68 8.607 16.809 74.642 1.00 34.23 O
ATOM 5 O5' G B 68 10.116 17.644 72.835 1.00 34.09 O
ATOM 6 C5' G B 68 11.326 17.574 73.591 1.00 34.21 C
ATOM 7 C4' G B 68 12.568 17.694 72.719 1.00 34.25 C
ATOM 8 O4' G B 68 12.644 16.575 71.795 1.00 33.62 O
ATOM 9 C3' G B 68 12.663 18.952 71.857 1.00 34.56 C
ATOM 10 O3' G B 68 14.028 19.340 71.709 1.00 36.41 O
ATOM 11 C2' G B 68 12.100 18.461 70.528 1.00 33.85 C
ATOM 12 O2' G B 68 12.543 19.235 69.432 1.00 33.93 O
ATOM 13 C1' G B 68 12.711 17.066 70.471 1.00 32.36 C
ATOM 14 N9 G B 68 11.998 16.147 69.591 1.00 31.29 N
ATOM 15 C8 G B 68 10.799 15.524 69.843 1.00 30.79 C
ATOM 16 N7 G B 68 10.399 14.754 68.870 1.00 30.49 N
ATOM 17 C5 G B 68 11.399 14.871 67.912 1.00 30.24 C
ATOM 18 C6 G B 68 11.517 14.266 66.637 1.00 30.19 C
ATOM 19 O6 G B 68 10.733 13.479 66.089 1.00 30.27 O
ATOM 20 N1 G B 68 12.685 14.656 65.984 1.00 29.62 N
ATOM 21 C2 G B 68 13.622 15.520 66.497 1.00 29.81 C
ATOM 22 N2 G B 68 14.685 15.774 65.718 1.00 30.22 N
ATOM 23 N3 G B 68 13.525 16.093 67.691 1.00 29.92 N
ATOM 24 C4 G B 68 12.392 15.725 68.340 1.00 30.57 C
ATOM 25 P U B 69 14.639 20.563 72.543 1.00 37.87 P
ATOM 26 OP1 U B 69 13.541 21.497 72.880 1.00 37.96 O
ATOM 27 OP2 U B 69 15.840 21.054 71.831 1.00 37.99 O
ATOM 28 O5' U B 69 15.142 19.847 73.877 1.00 38.20 O
TER
ATOM 2 P G A 50 4.267 4.742 64.892 1.00 36.51 P
ATOM 3 OP1 G A 50 3.249 3.668 64.901 1.00 36.86 O
ATOM 4 OP2 G A 50 4.731 5.316 63.610 1.00 35.75 O
ATOM 5 O5' G A 50 3.748 5.939 65.819 1.00 36.63 O
ATOM 6 C5' G A 50 3.217 5.645 67.103 1.00 36.90 C
ATOM 7 C4' G A 50 3.283 6.861 68.008 1.00 37.29 C
ATOM 8 O4' G A 50 4.666 7.227 68.232 1.00 36.66 O
ATOM 9 C3' G A 50 2.629 8.116 67.450 1.00 37.54 C
ATOM 10 O3' G A 50 1.244 8.113 67.774 1.00 39.32 O
ATOM 11 C2' G A 50 3.374 9.213 68.207 1.00 36.79 C
ATOM 12 O2' G A 50 2.838 9.446 69.496 1.00 35.65 O
ATOM 13 C1' G A 50 4.781 8.632 68.331 1.00 35.73 C
ATOM 14 N9 G A 50 5.697 9.101 67.294 1.00 35.51 N
ATOM 15 C8 G A 50 5.851 8.581 66.032 1.00 35.06 C
ATOM 16 N7 G A 50 6.746 9.207 65.319 1.00 34.75 N
ATOM 17 C5 G A 50 7.213 10.207 66.162 1.00 34.58 C
ATOM 18 C6 G A 50 8.195 11.200 65.938 1.00 34.26 C
ATOM 19 O6 G A 50 8.860 11.394 64.913 1.00 33.65 O
ATOM 20 N1 G A 50 8.375 12.017 67.052 1.00 34.27 N
ATOM 21 C2 G A 50 7.690 11.885 68.235 1.00 34.50 C
ATOM 22 N2 G A 50 7.997 12.765 69.198 1.00 34.74 N
ATOM 23 N3 G A 50 6.767 10.956 68.459 1.00 34.62 N
ATOM 24 C4 G A 50 6.580 10.155 67.382 1.00 34.84 C
ATOM 25 P A A 51 0.103 8.025 66.652 1.00 40.31 P
ATOM 26 OP1 A A 51 -0.565 9.346 66.589 1.00 40.43 O
ATOM 27 OP2 A A 51 -0.689 6.808 66.941 1.00 40.76 O
ATOM 28 O5' A A 51 0.884 7.782 65.278 1.00 40.81 O
TER
ATOM 1 O3' C B 67 7.661 17.334 72.401 1.00 32.89 O
ATOM 2 P G B 68 8.886 16.682 73.196 1.00 34.23 P
ATOM 3 OP1 G B 68 9.135 15.343 72.608 1.00 33.34 O
ATOM 4 OP2 G B 68 8.607 16.809 74.642 1.00 34.23 O
ATOM 5 O5' G B 68 10.116 17.644 72.835 1.00 34.09 O
ATOM 6 C5' G B 68 11.326 17.574 73.591 1.00 34.21 C
ATOM 7 C4' G B 68 12.568 17.694 72.719 1.00 34.25 C
ATOM 8 O4' G B 68 12.644 16.575 71.795 1.00 33.62 O
ATOM 9 C3' G B 68 12.663 18.952 71.857 1.00 34.56 C
ATOM 10 O3' G B 68 14.028 19.340 71.709 1.00 36.41 O
ATOM 11 C2' G B 68 12.100 18.461 70.528 1.00 33.85 C
ATOM 12 O2' G B 68 12.543 19.235 69.432 1.00 33.93 O
ATOM 13 C1' G B 68 12.711 17.066 70.471 1.00 32.36 C
ATOM 14 N9 G B 68 11.998 16.147 69.591 1.00 31.29 N
ATOM 15 C8 G B 68 10.799 15.524 69.843 1.00 30.79 C
ATOM 16 N7 G B 68 10.399 14.754 68.870 1.00 30.49 N
ATOM 17 C5 G B 68 11.399 14.871 67.912 1.00 30.24 C
ATOM 18 C6 G B 68 11.517 14.266 66.637 1.00 30.19 C
ATOM 19 O6 G B 68 10.733 13.479 66.089 1.00 30.27 O
ATOM 20 N1 G B 68 12.685 14.656 65.984 1.00 29.62 N
ATOM 21 C2 G B 68 13.622 15.520 66.497 1.00 29.81 C
ATOM 22 N2 G B 68 14.685 15.774 65.718 1.00 30.22 N
ATOM 23 N3 G B 68 13.525 16.093 67.691 1.00 29.92 N
ATOM 24 C4 G B 68 12.392 15.725 68.340 1.00 30.57 C
ATOM 25 P U B 69 14.639 20.563 72.543 1.00 37.87 P
ATOM 26 OP1 U B 69 13.541 21.497 72.880 1.00 37.96 O
ATOM 27 OP2 U B 69 15.840 21.054 71.831 1.00 37.99 O
ATOM 28 O5' U B 69 15.142 19.847 73.877 1.00 38.20 O
TER
Atoms:
OP1: (3.249,3.668,64.901)
OP2: (4.731,5.316,63.610)
C3': (2.629,8.116,67.450)
C1': (4.781,8.632,68.331)
C5': (3.217,5.645,67.103)
O6: (8.860,11.394,64.913)
O4': (4.666,7.227,68.232)
C8: (5.851,8.581,66.032)
C2: (7.690,11.885,68.235)
C6: (8.195,11.200,65.938)
C5: (7.213,10.207,66.162)
C4: (6.580,10.155,67.382)
P: (4.267,4.742,64.892)
C4': (3.283,6.861,68.008)
C2': (3.374,9.213,68.207)
O2': (2.838,9.446,69.496)
N1: (8.375,12.017,67.052)
N2: (7.997,12.765,69.198)
N3: (6.767,10.956,68.459)
N7: (6.746,9.207,65.319)
N9: (5.697,9.101,67.294)
O5': (3.748,5.939,65.819)
O3': (1.244,8.113,67.774)
OP2: (4.731,5.316,63.610)
C3': (2.629,8.116,67.450)
C1': (4.781,8.632,68.331)
C5': (3.217,5.645,67.103)
O6: (8.860,11.394,64.913)
O4': (4.666,7.227,68.232)
C8: (5.851,8.581,66.032)
C2: (7.690,11.885,68.235)
C6: (8.195,11.200,65.938)
C5: (7.213,10.207,66.162)
C4: (6.580,10.155,67.382)
P: (4.267,4.742,64.892)
C4': (3.283,6.861,68.008)
C2': (3.374,9.213,68.207)
O2': (2.838,9.446,69.496)
N1: (8.375,12.017,67.052)
N2: (7.997,12.765,69.198)
N3: (6.767,10.956,68.459)
N7: (6.746,9.207,65.319)
N9: (5.697,9.101,67.294)
O5': (3.748,5.939,65.819)
O3': (1.244,8.113,67.774)
OP1: (9.135,15.343,72.608)
OP2: (8.607,16.809,74.642)
C3': (12.663,18.952,71.857)
C1': (12.711,17.066,70.471)
C5': (11.326,17.574,73.591)
O6: (10.733,13.479,66.089)
O4': (12.644,16.575,71.795)
C8: (10.799,15.524,69.843)
C2: (13.622,15.520,66.497)
C6: (11.517,14.266,66.637)
C5: (11.399,14.871,67.912)
C4: (12.392,15.725,68.340)
P: (8.886,16.682,73.196)
C4': (12.568,17.694,72.719)
C2': (12.100,18.461,70.528)
O2': (12.543,19.235,69.432)
N1: (12.685,14.656,65.984)
N2: (14.685,15.774,65.718)
N3: (13.525,16.093,67.691)
N7: (10.399,14.754,68.870)
N9: (11.998,16.147,69.591)
O5': (10.116,17.644,72.835)
O3': (14.028,19.340,71.709)
OP2: (8.607,16.809,74.642)
C3': (12.663,18.952,71.857)
C1': (12.711,17.066,70.471)
C5': (11.326,17.574,73.591)
O6: (10.733,13.479,66.089)
O4': (12.644,16.575,71.795)
C8: (10.799,15.524,69.843)
C2: (13.622,15.520,66.497)
C6: (11.517,14.266,66.637)
C5: (11.399,14.871,67.912)
C4: (12.392,15.725,68.340)
P: (8.886,16.682,73.196)
C4': (12.568,17.694,72.719)
C2': (12.100,18.461,70.528)
O2': (12.543,19.235,69.432)
N1: (12.685,14.656,65.984)
N2: (14.685,15.774,65.718)
N3: (13.525,16.093,67.691)
N7: (10.399,14.754,68.870)
N9: (11.998,16.147,69.591)
O5': (10.116,17.644,72.835)
O3': (14.028,19.340,71.709)
Image (generated by PyMOL):