Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2HOJ:A47:A65
Extra
PDB:
ATOM 1 O3' U A 46 29.669 27.279 73.374 1.00 37.56 O
ATOM 2 P G A 47 29.571 28.086 74.755 1.00 40.38 P
ATOM 3 OP1 G A 47 29.232 27.112 75.834 1.00 38.75 O
ATOM 4 OP2 G A 47 28.697 29.276 74.541 1.00 41.28 O
ATOM 5 O5' G A 47 31.060 28.606 74.985 1.00 39.09 O
ATOM 6 C5' G A 47 32.120 27.706 75.310 1.00 37.90 C
ATOM 7 C4' G A 47 33.444 28.430 75.226 1.00 39.02 C
ATOM 8 O4' G A 47 33.667 28.854 73.852 1.00 37.20 O
ATOM 9 C3' G A 47 33.524 29.713 76.044 1.00 36.68 C
ATOM 10 O3' G A 47 34.020 29.451 77.353 1.00 35.99 O
ATOM 11 C2' G A 47 34.593 30.490 75.298 1.00 36.19 C
ATOM 12 O2' G A 47 35.860 29.990 75.653 1.00 38.15 O
ATOM 13 C1' G A 47 34.300 30.121 73.842 1.00 36.47 C
ATOM 14 N9 G A 47 33.435 31.056 73.122 1.00 37.30 N
ATOM 15 C8 G A 47 32.064 31.125 73.186 1.00 37.08 C
ATOM 16 N7 G A 47 31.557 32.015 72.378 1.00 35.56 N
ATOM 17 C5 G A 47 32.656 32.582 71.753 1.00 35.99 C
ATOM 18 C6 G A 47 32.726 33.595 70.772 1.00 34.22 C
ATOM 19 O6 G A 47 31.800 34.218 70.241 1.00 34.73 O
ATOM 20 N1 G A 47 34.039 33.868 70.414 1.00 33.54 N
ATOM 21 C2 G A 47 35.145 33.250 70.938 1.00 34.45 C
ATOM 22 N2 G A 47 36.335 33.664 70.474 1.00 35.98 N
ATOM 23 N3 G A 47 35.094 32.301 71.853 1.00 36.85 N
ATOM 24 C4 G A 47 33.826 32.015 72.212 1.00 36.89 C
ATOM 25 P A A 48 33.009 29.307 78.598 1.00 36.02 P
ATOM 26 OP1 A A 48 33.757 29.732 79.804 1.00 37.80 O
ATOM 27 OP2 A A 48 32.467 27.924 78.517 1.00 40.29 O
ATOM 28 O5' A A 48 31.827 30.368 78.362 1.00 37.65 O
TER
ATOM 1 O3' C B 64 41.231 36.323 70.298 1.00 46.45 O
ATOM 2 P G B 65 41.348 35.319 69.050 1.00 48.44 P
ATOM 3 OP1 G B 65 40.240 34.337 69.160 1.00 49.32 O
ATOM 4 OP2 G B 65 42.748 34.828 68.960 1.00 48.65 O
ATOM 5 O5' G B 65 41.078 36.231 67.771 1.00 48.97 O
ATOM 6 C5' G B 65 41.418 35.758 66.472 1.00 50.33 C
ATOM 7 C4' G B 65 40.827 36.644 65.395 1.00 51.24 C
ATOM 8 O4' G B 65 39.426 36.315 65.185 1.00 50.26 O
ATOM 9 C3' G B 65 40.843 38.118 65.751 1.00 52.19 C
ATOM 10 O3' G B 65 41.692 38.983 65.001 1.00 57.80 O
ATOM 11 C2' G B 65 39.443 38.477 66.249 1.00 49.75 C
ATOM 12 O2' G B 65 38.966 39.708 65.758 1.00 48.74 O
ATOM 13 C1' G B 65 38.588 37.365 65.639 1.00 47.18 C
ATOM 14 N9 G B 65 37.570 36.805 66.526 1.00 44.44 N
ATOM 15 C8 G B 65 37.771 35.996 67.623 1.00 44.89 C
ATOM 16 N7 G B 65 36.659 35.667 68.230 1.00 41.32 N
ATOM 17 C5 G B 65 35.664 36.292 67.487 1.00 39.30 C
ATOM 18 C6 G B 65 34.253 36.309 67.665 1.00 35.76 C
ATOM 19 O6 G B 65 33.580 35.760 68.545 1.00 31.93 O
ATOM 20 N1 G B 65 33.624 37.065 66.684 1.00 32.08 N
ATOM 21 C2 G B 65 34.260 37.726 65.664 1.00 33.44 C
ATOM 22 N2 G B 65 33.471 38.404 64.815 1.00 29.29 N
ATOM 23 N3 G B 65 35.572 37.723 65.488 1.00 37.86 N
ATOM 24 C4 G B 65 36.208 36.993 66.429 1.00 40.21 C
ATOM 25 P U B 66 41.259 39.436 63.524 1.00 61.75 P
ATOM 26 OP1 U B 66 42.189 40.493 63.062 1.00 60.87 O
ATOM 27 OP2 U B 66 39.805 39.714 63.560 1.00 65.49 O
ATOM 28 O5' U B 66 41.475 38.117 62.649 1.00 63.37 O
TER
ATOM 2 P G A 47 29.571 28.086 74.755 1.00 40.38 P
ATOM 3 OP1 G A 47 29.232 27.112 75.834 1.00 38.75 O
ATOM 4 OP2 G A 47 28.697 29.276 74.541 1.00 41.28 O
ATOM 5 O5' G A 47 31.060 28.606 74.985 1.00 39.09 O
ATOM 6 C5' G A 47 32.120 27.706 75.310 1.00 37.90 C
ATOM 7 C4' G A 47 33.444 28.430 75.226 1.00 39.02 C
ATOM 8 O4' G A 47 33.667 28.854 73.852 1.00 37.20 O
ATOM 9 C3' G A 47 33.524 29.713 76.044 1.00 36.68 C
ATOM 10 O3' G A 47 34.020 29.451 77.353 1.00 35.99 O
ATOM 11 C2' G A 47 34.593 30.490 75.298 1.00 36.19 C
ATOM 12 O2' G A 47 35.860 29.990 75.653 1.00 38.15 O
ATOM 13 C1' G A 47 34.300 30.121 73.842 1.00 36.47 C
ATOM 14 N9 G A 47 33.435 31.056 73.122 1.00 37.30 N
ATOM 15 C8 G A 47 32.064 31.125 73.186 1.00 37.08 C
ATOM 16 N7 G A 47 31.557 32.015 72.378 1.00 35.56 N
ATOM 17 C5 G A 47 32.656 32.582 71.753 1.00 35.99 C
ATOM 18 C6 G A 47 32.726 33.595 70.772 1.00 34.22 C
ATOM 19 O6 G A 47 31.800 34.218 70.241 1.00 34.73 O
ATOM 20 N1 G A 47 34.039 33.868 70.414 1.00 33.54 N
ATOM 21 C2 G A 47 35.145 33.250 70.938 1.00 34.45 C
ATOM 22 N2 G A 47 36.335 33.664 70.474 1.00 35.98 N
ATOM 23 N3 G A 47 35.094 32.301 71.853 1.00 36.85 N
ATOM 24 C4 G A 47 33.826 32.015 72.212 1.00 36.89 C
ATOM 25 P A A 48 33.009 29.307 78.598 1.00 36.02 P
ATOM 26 OP1 A A 48 33.757 29.732 79.804 1.00 37.80 O
ATOM 27 OP2 A A 48 32.467 27.924 78.517 1.00 40.29 O
ATOM 28 O5' A A 48 31.827 30.368 78.362 1.00 37.65 O
TER
ATOM 1 O3' C B 64 41.231 36.323 70.298 1.00 46.45 O
ATOM 2 P G B 65 41.348 35.319 69.050 1.00 48.44 P
ATOM 3 OP1 G B 65 40.240 34.337 69.160 1.00 49.32 O
ATOM 4 OP2 G B 65 42.748 34.828 68.960 1.00 48.65 O
ATOM 5 O5' G B 65 41.078 36.231 67.771 1.00 48.97 O
ATOM 6 C5' G B 65 41.418 35.758 66.472 1.00 50.33 C
ATOM 7 C4' G B 65 40.827 36.644 65.395 1.00 51.24 C
ATOM 8 O4' G B 65 39.426 36.315 65.185 1.00 50.26 O
ATOM 9 C3' G B 65 40.843 38.118 65.751 1.00 52.19 C
ATOM 10 O3' G B 65 41.692 38.983 65.001 1.00 57.80 O
ATOM 11 C2' G B 65 39.443 38.477 66.249 1.00 49.75 C
ATOM 12 O2' G B 65 38.966 39.708 65.758 1.00 48.74 O
ATOM 13 C1' G B 65 38.588 37.365 65.639 1.00 47.18 C
ATOM 14 N9 G B 65 37.570 36.805 66.526 1.00 44.44 N
ATOM 15 C8 G B 65 37.771 35.996 67.623 1.00 44.89 C
ATOM 16 N7 G B 65 36.659 35.667 68.230 1.00 41.32 N
ATOM 17 C5 G B 65 35.664 36.292 67.487 1.00 39.30 C
ATOM 18 C6 G B 65 34.253 36.309 67.665 1.00 35.76 C
ATOM 19 O6 G B 65 33.580 35.760 68.545 1.00 31.93 O
ATOM 20 N1 G B 65 33.624 37.065 66.684 1.00 32.08 N
ATOM 21 C2 G B 65 34.260 37.726 65.664 1.00 33.44 C
ATOM 22 N2 G B 65 33.471 38.404 64.815 1.00 29.29 N
ATOM 23 N3 G B 65 35.572 37.723 65.488 1.00 37.86 N
ATOM 24 C4 G B 65 36.208 36.993 66.429 1.00 40.21 C
ATOM 25 P U B 66 41.259 39.436 63.524 1.00 61.75 P
ATOM 26 OP1 U B 66 42.189 40.493 63.062 1.00 60.87 O
ATOM 27 OP2 U B 66 39.805 39.714 63.560 1.00 65.49 O
ATOM 28 O5' U B 66 41.475 38.117 62.649 1.00 63.37 O
TER
Atoms:
OP1: (29.232,27.112,75.834)
OP2: (28.697,29.276,74.541)
C3': (33.524,29.713,76.044)
C1': (34.300,30.121,73.842)
C5': (32.120,27.706,75.310)
O6: (31.800,34.218,70.241)
O4': (33.667,28.854,73.852)
C8: (32.064,31.125,73.186)
C2: (35.145,33.250,70.938)
C6: (32.726,33.595,70.772)
C5: (32.656,32.582,71.753)
C4: (33.826,32.015,72.212)
P: (29.571,28.086,74.755)
C4': (33.444,28.430,75.226)
C2': (34.593,30.490,75.298)
O2': (35.860,29.990,75.653)
N1: (34.039,33.868,70.414)
N2: (36.335,33.664,70.474)
N3: (35.094,32.301,71.853)
N7: (31.557,32.015,72.378)
N9: (33.435,31.056,73.122)
O5': (31.060,28.606,74.985)
O3': (34.020,29.451,77.353)
OP2: (28.697,29.276,74.541)
C3': (33.524,29.713,76.044)
C1': (34.300,30.121,73.842)
C5': (32.120,27.706,75.310)
O6: (31.800,34.218,70.241)
O4': (33.667,28.854,73.852)
C8: (32.064,31.125,73.186)
C2: (35.145,33.250,70.938)
C6: (32.726,33.595,70.772)
C5: (32.656,32.582,71.753)
C4: (33.826,32.015,72.212)
P: (29.571,28.086,74.755)
C4': (33.444,28.430,75.226)
C2': (34.593,30.490,75.298)
O2': (35.860,29.990,75.653)
N1: (34.039,33.868,70.414)
N2: (36.335,33.664,70.474)
N3: (35.094,32.301,71.853)
N7: (31.557,32.015,72.378)
N9: (33.435,31.056,73.122)
O5': (31.060,28.606,74.985)
O3': (34.020,29.451,77.353)
OP1: (40.240,34.337,69.160)
OP2: (42.748,34.828,68.960)
C3': (40.843,38.118,65.751)
C1': (38.588,37.365,65.639)
C5': (41.418,35.758,66.472)
O6: (33.580,35.760,68.545)
O4': (39.426,36.315,65.185)
C8: (37.771,35.996,67.623)
C2: (34.260,37.726,65.664)
C6: (34.253,36.309,67.665)
C5: (35.664,36.292,67.487)
C4: (36.208,36.993,66.429)
P: (41.348,35.319,69.050)
C4': (40.827,36.644,65.395)
C2': (39.443,38.477,66.249)
O2': (38.966,39.708,65.758)
N1: (33.624,37.065,66.684)
N2: (33.471,38.404,64.815)
N3: (35.572,37.723,65.488)
N7: (36.659,35.667,68.230)
N9: (37.570,36.805,66.526)
O5': (41.078,36.231,67.771)
O3': (41.692,38.983,65.001)
OP2: (42.748,34.828,68.960)
C3': (40.843,38.118,65.751)
C1': (38.588,37.365,65.639)
C5': (41.418,35.758,66.472)
O6: (33.580,35.760,68.545)
O4': (39.426,36.315,65.185)
C8: (37.771,35.996,67.623)
C2: (34.260,37.726,65.664)
C6: (34.253,36.309,67.665)
C5: (35.664,36.292,67.487)
C4: (36.208,36.993,66.429)
P: (41.348,35.319,69.050)
C4': (40.827,36.644,65.395)
C2': (39.443,38.477,66.249)
O2': (38.966,39.708,65.758)
N1: (33.624,37.065,66.684)
N2: (33.471,38.404,64.815)
N3: (35.572,37.723,65.488)
N7: (36.659,35.667,68.230)
N9: (37.570,36.805,66.526)
O5': (41.078,36.231,67.771)
O3': (41.692,38.983,65.001)
Image (generated by PyMOL):