Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1489:A1490
Extra
PDB:
ATOM 1 O3' G A1488 -38.257 116.540 107.018 1.00 0.79 O
ATOM 2 P G A1489 -38.460 115.558 108.276 1.00 24.46 P
ATOM 3 OP1 G A1489 -39.650 115.996 109.066 1.00 39.65 O
ATOM 4 OP2 G A1489 -37.143 115.396 108.944 1.00 38.79 O
ATOM 5 O5' G A1489 -38.825 114.162 107.613 1.00 12.75 O
ATOM 6 C5' G A1489 -40.158 113.925 107.115 1.00 11.73 C
ATOM 7 C4' G A1489 -40.413 112.440 106.941 1.00 11.51 C
ATOM 8 O4' G A1489 -41.845 112.223 106.972 1.00 12.26 O
ATOM 9 C3' G A1489 -39.916 111.782 105.656 1.00 11.03 C
ATOM 10 O3' G A1489 -38.619 111.226 105.828 1.00 9.94 O
ATOM 11 C2' G A1489 -40.878 110.620 105.513 1.00 11.07 C
ATOM 12 O2' G A1489 -40.436 109.586 106.371 1.00 9.73 O
ATOM 13 C1' G A1489 -42.184 111.201 106.067 1.00 11.01 C
ATOM 14 N9 G A1489 -43.068 111.772 105.054 1.00 42.78 N
ATOM 15 C8 G A1489 -43.181 113.096 104.697 1.00 44.26 C
ATOM 16 N7 G A1489 -44.048 113.298 103.742 1.00 46.34 N
ATOM 17 C5 G A1489 -44.535 112.032 103.452 1.00 45.42 C
ATOM 18 C6 G A1489 -45.485 111.616 102.492 1.00 47.09 C
ATOM 19 O6 G A1489 -46.092 112.304 101.659 1.00 49.17 O
ATOM 20 N1 G A1489 -45.697 110.245 102.550 1.00 47.81 N
ATOM 21 C2 G A1489 -45.065 109.384 103.413 1.00 47.37 C
ATOM 22 N2 G A1489 -45.410 108.096 103.329 1.00 47.73 N
ATOM 23 N3 G A1489 -44.164 109.756 104.295 1.00 47.91 N
ATOM 24 C4 G A1489 -43.950 111.083 104.264 1.00 44.91 C
ATOM 25 P A A1490 -37.676 110.976 104.553 1.00 28.18 P
ATOM 26 OP1 A A1490 -36.458 110.250 105.009 1.00 24.50 O
ATOM 27 OP2 A A1490 -37.546 112.258 103.842 1.00 24.50 O
ATOM 28 O5' A A1490 -38.503 110.040 103.574 1.00 6.93 O
TER
ATOM 1 O3' G B1489 -38.619 111.226 105.828 1.00 9.94 O
ATOM 2 P A B1490 -37.676 110.976 104.553 1.00 28.18 P
ATOM 3 OP1 A B1490 -36.458 110.250 105.009 1.00 24.50 O
ATOM 4 OP2 A B1490 -37.546 112.258 103.842 1.00 24.50 O
ATOM 5 O5' A B1490 -38.503 110.040 103.574 1.00 6.93 O
ATOM 6 C5' A B1490 -38.483 108.618 103.723 1.00 4.93 C
ATOM 7 C4' A B1490 -39.448 107.979 102.759 1.00 5.20 C
ATOM 8 O4' A B1490 -40.796 108.472 103.006 1.00 5.23 O
ATOM 9 C3' A B1490 -39.174 108.309 101.308 1.00 5.15 C
ATOM 10 O3' A B1490 -38.173 107.450 100.797 1.00 6.08 O
ATOM 11 C2' A B1490 -40.542 108.111 100.675 1.00 5.93 C
ATOM 12 O2' A B1490 -40.823 106.734 100.497 1.00 7.84 O
ATOM 13 C1' A B1490 -41.476 108.631 101.775 1.00 5.24 C
ATOM 14 N9 A B1490 -41.818 110.048 101.607 1.00 33.90 N
ATOM 15 C8 A B1490 -41.335 111.111 102.332 1.00 33.74 C
ATOM 16 N7 A B1490 -41.792 112.275 101.934 1.00 33.74 N
ATOM 17 C5 A B1490 -42.641 111.960 100.880 1.00 33.74 C
ATOM 18 C6 A B1490 -43.435 112.756 100.039 1.00 36.02 C
ATOM 19 N6 A B1490 -43.497 114.083 100.120 1.00 33.74 N
ATOM 20 N1 A B1490 -44.170 112.134 99.099 1.00 37.44 N
ATOM 21 C2 A B1490 -44.103 110.805 99.014 1.00 34.69 C
ATOM 22 N3 A B1490 -43.392 109.948 99.738 1.00 33.89 N
ATOM 23 C4 A B1490 -42.674 110.594 100.670 1.00 33.74 C
ATOM 24 P A B1491 -36.776 108.076 100.307 1.00 17.61 P
ATOM 25 OP1 A B1491 -35.724 107.025 100.380 1.00 21.12 O
ATOM 26 OP2 A B1491 -36.596 109.354 101.046 1.00 21.87 O
ATOM 27 O5' A B1491 -37.020 108.429 98.772 1.00 1.64 O
TER
ATOM 2 P G A1489 -38.460 115.558 108.276 1.00 24.46 P
ATOM 3 OP1 G A1489 -39.650 115.996 109.066 1.00 39.65 O
ATOM 4 OP2 G A1489 -37.143 115.396 108.944 1.00 38.79 O
ATOM 5 O5' G A1489 -38.825 114.162 107.613 1.00 12.75 O
ATOM 6 C5' G A1489 -40.158 113.925 107.115 1.00 11.73 C
ATOM 7 C4' G A1489 -40.413 112.440 106.941 1.00 11.51 C
ATOM 8 O4' G A1489 -41.845 112.223 106.972 1.00 12.26 O
ATOM 9 C3' G A1489 -39.916 111.782 105.656 1.00 11.03 C
ATOM 10 O3' G A1489 -38.619 111.226 105.828 1.00 9.94 O
ATOM 11 C2' G A1489 -40.878 110.620 105.513 1.00 11.07 C
ATOM 12 O2' G A1489 -40.436 109.586 106.371 1.00 9.73 O
ATOM 13 C1' G A1489 -42.184 111.201 106.067 1.00 11.01 C
ATOM 14 N9 G A1489 -43.068 111.772 105.054 1.00 42.78 N
ATOM 15 C8 G A1489 -43.181 113.096 104.697 1.00 44.26 C
ATOM 16 N7 G A1489 -44.048 113.298 103.742 1.00 46.34 N
ATOM 17 C5 G A1489 -44.535 112.032 103.452 1.00 45.42 C
ATOM 18 C6 G A1489 -45.485 111.616 102.492 1.00 47.09 C
ATOM 19 O6 G A1489 -46.092 112.304 101.659 1.00 49.17 O
ATOM 20 N1 G A1489 -45.697 110.245 102.550 1.00 47.81 N
ATOM 21 C2 G A1489 -45.065 109.384 103.413 1.00 47.37 C
ATOM 22 N2 G A1489 -45.410 108.096 103.329 1.00 47.73 N
ATOM 23 N3 G A1489 -44.164 109.756 104.295 1.00 47.91 N
ATOM 24 C4 G A1489 -43.950 111.083 104.264 1.00 44.91 C
ATOM 25 P A A1490 -37.676 110.976 104.553 1.00 28.18 P
ATOM 26 OP1 A A1490 -36.458 110.250 105.009 1.00 24.50 O
ATOM 27 OP2 A A1490 -37.546 112.258 103.842 1.00 24.50 O
ATOM 28 O5' A A1490 -38.503 110.040 103.574 1.00 6.93 O
TER
ATOM 1 O3' G B1489 -38.619 111.226 105.828 1.00 9.94 O
ATOM 2 P A B1490 -37.676 110.976 104.553 1.00 28.18 P
ATOM 3 OP1 A B1490 -36.458 110.250 105.009 1.00 24.50 O
ATOM 4 OP2 A B1490 -37.546 112.258 103.842 1.00 24.50 O
ATOM 5 O5' A B1490 -38.503 110.040 103.574 1.00 6.93 O
ATOM 6 C5' A B1490 -38.483 108.618 103.723 1.00 4.93 C
ATOM 7 C4' A B1490 -39.448 107.979 102.759 1.00 5.20 C
ATOM 8 O4' A B1490 -40.796 108.472 103.006 1.00 5.23 O
ATOM 9 C3' A B1490 -39.174 108.309 101.308 1.00 5.15 C
ATOM 10 O3' A B1490 -38.173 107.450 100.797 1.00 6.08 O
ATOM 11 C2' A B1490 -40.542 108.111 100.675 1.00 5.93 C
ATOM 12 O2' A B1490 -40.823 106.734 100.497 1.00 7.84 O
ATOM 13 C1' A B1490 -41.476 108.631 101.775 1.00 5.24 C
ATOM 14 N9 A B1490 -41.818 110.048 101.607 1.00 33.90 N
ATOM 15 C8 A B1490 -41.335 111.111 102.332 1.00 33.74 C
ATOM 16 N7 A B1490 -41.792 112.275 101.934 1.00 33.74 N
ATOM 17 C5 A B1490 -42.641 111.960 100.880 1.00 33.74 C
ATOM 18 C6 A B1490 -43.435 112.756 100.039 1.00 36.02 C
ATOM 19 N6 A B1490 -43.497 114.083 100.120 1.00 33.74 N
ATOM 20 N1 A B1490 -44.170 112.134 99.099 1.00 37.44 N
ATOM 21 C2 A B1490 -44.103 110.805 99.014 1.00 34.69 C
ATOM 22 N3 A B1490 -43.392 109.948 99.738 1.00 33.89 N
ATOM 23 C4 A B1490 -42.674 110.594 100.670 1.00 33.74 C
ATOM 24 P A B1491 -36.776 108.076 100.307 1.00 17.61 P
ATOM 25 OP1 A B1491 -35.724 107.025 100.380 1.00 21.12 O
ATOM 26 OP2 A B1491 -36.596 109.354 101.046 1.00 21.87 O
ATOM 27 O5' A B1491 -37.020 108.429 98.772 1.00 1.64 O
TER
Atoms:
OP1: (-39.650,115.996,109.066)
OP2: (-37.143,115.396,108.944)
C3': (-39.916,111.782,105.656)
C1': (-42.184,111.201,106.067)
C5': (-40.158,113.925,107.115)
O6: (-46.092,112.304,101.659)
O4': (-41.845,112.223,106.972)
C8: (-43.181,113.096,104.697)
C2: (-45.065,109.384,103.413)
C6: (-45.485,111.616,102.492)
C5: (-44.535,112.032,103.452)
C4: (-43.950,111.083,104.264)
P: (-38.460,115.558,108.276)
C4': (-40.413,112.440,106.941)
C2': (-40.878,110.620,105.513)
O2': (-40.436,109.586,106.371)
N1: (-45.697,110.245,102.550)
N2: (-45.410,108.096,103.329)
N3: (-44.164,109.756,104.295)
N7: (-44.048,113.298,103.742)
N9: (-43.068,111.772,105.054)
O5': (-38.825,114.162,107.613)
O3': (-38.619,111.226,105.828)
OP2: (-37.143,115.396,108.944)
C3': (-39.916,111.782,105.656)
C1': (-42.184,111.201,106.067)
C5': (-40.158,113.925,107.115)
O6: (-46.092,112.304,101.659)
O4': (-41.845,112.223,106.972)
C8: (-43.181,113.096,104.697)
C2: (-45.065,109.384,103.413)
C6: (-45.485,111.616,102.492)
C5: (-44.535,112.032,103.452)
C4: (-43.950,111.083,104.264)
P: (-38.460,115.558,108.276)
C4': (-40.413,112.440,106.941)
C2': (-40.878,110.620,105.513)
O2': (-40.436,109.586,106.371)
N1: (-45.697,110.245,102.550)
N2: (-45.410,108.096,103.329)
N3: (-44.164,109.756,104.295)
N7: (-44.048,113.298,103.742)
N9: (-43.068,111.772,105.054)
O5': (-38.825,114.162,107.613)
O3': (-38.619,111.226,105.828)
OP1: (-36.458,110.250,105.009)
OP2: (-37.546,112.258,103.842)
C3': (-39.174,108.309,101.308)
C1': (-41.476,108.631,101.775)
C5': (-38.483,108.618,103.723)
O4': (-40.796,108.472,103.006)
C8: (-41.335,111.111,102.332)
O2': (-40.823,106.734,100.497)
C6: (-43.435,112.756,100.039)
C5: (-42.641,111.960,100.880)
C4: (-42.674,110.594,100.670)
P: (-37.676,110.976,104.553)
C4': (-39.448,107.979,102.759)
C2': (-40.542,108.111,100.675)
C2: (-44.103,110.805,99.014)
N1: (-44.170,112.134,99.099)
N3: (-43.392,109.948,99.738)
N6: (-43.497,114.083,100.120)
N7: (-41.792,112.275,101.934)
N9: (-41.818,110.048,101.607)
O5': (-38.503,110.040,103.574)
O3': (-38.173,107.450,100.797)
OP2: (-37.546,112.258,103.842)
C3': (-39.174,108.309,101.308)
C1': (-41.476,108.631,101.775)
C5': (-38.483,108.618,103.723)
O4': (-40.796,108.472,103.006)
C8: (-41.335,111.111,102.332)
O2': (-40.823,106.734,100.497)
C6: (-43.435,112.756,100.039)
C5: (-42.641,111.960,100.880)
C4: (-42.674,110.594,100.670)
P: (-37.676,110.976,104.553)
C4': (-39.448,107.979,102.759)
C2': (-40.542,108.111,100.675)
C2: (-44.103,110.805,99.014)
N1: (-44.170,112.134,99.099)
N3: (-43.392,109.948,99.738)
N6: (-43.497,114.083,100.120)
N7: (-41.792,112.275,101.934)
N9: (-41.818,110.048,101.607)
O5': (-38.503,110.040,103.574)
O3': (-38.173,107.450,100.797)
Image (generated by PyMOL):