ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A59:A63

Extra

PDB:
ATOM 1 O3' C A 58 107.324 48.495 15.700 1.00 68.14 O
ATOM 2 P G A 59 107.395 47.509 16.962 1.00 67.98 P
ATOM 3 OP1 G A 59 106.306 47.970 17.882 1.00 68.99 O
ATOM 4 OP2 G A 59 108.811 47.411 17.447 1.00 63.03 O
ATOM 5 O5' G A 59 106.948 46.125 16.320 1.00 68.16 O
ATOM 6 C5' G A 59 105.749 46.040 15.512 1.00 69.89 C
ATOM 7 C4' G A 59 104.938 44.835 15.922 1.00 72.16 C
ATOM 8 O4' G A 59 105.627 43.626 15.499 1.00 72.00 O
ATOM 9 C3' G A 59 104.733 44.713 17.432 1.00 72.83 C
ATOM 10 O3' G A 59 103.453 44.146 17.692 1.00 74.68 O
ATOM 11 C2' G A 59 105.835 43.739 17.840 1.00 70.99 C
ATOM 12 O2' G A 59 105.536 43.035 19.022 1.00 71.44 O
ATOM 13 C1' G A 59 105.880 42.817 16.622 1.00 69.85 C
ATOM 14 N9 G A 59 107.112 42.073 16.388 1.00 66.55 N
ATOM 15 C8 G A 59 108.371 42.322 16.881 1.00 66.44 C
ATOM 16 N7 G A 59 109.252 41.426 16.512 1.00 65.54 N
ATOM 17 C5 G A 59 108.531 40.542 15.718 1.00 64.25 C
ATOM 18 C6 G A 59 108.943 39.364 15.044 1.00 62.98 C
ATOM 19 O6 G A 59 110.064 38.855 15.004 1.00 63.90 O
ATOM 20 N1 G A 59 107.886 38.768 14.363 1.00 60.37 N
ATOM 21 C2 G A 59 106.601 39.243 14.326 1.00 60.73 C
ATOM 22 N2 G A 59 105.724 38.532 13.607 1.00 58.34 N
ATOM 23 N3 G A 59 106.203 40.340 14.947 1.00 62.70 N
ATOM 24 C4 G A 59 107.213 40.933 15.622 1.00 65.08 C
ATOM 25 P U A 60 102.229 45.096 18.123 1.00 78.57 P
ATOM 26 OP1 U A 60 101.102 44.176 18.472 1.00 77.86 O
ATOM 27 OP2 U A 60 102.716 46.109 19.099 1.00 78.22 O
ATOM 28 O5' U A 60 101.826 45.856 16.797 1.00 78.92 O
TER

ATOM 1 O3' C B 62 100.978 36.570 9.510 1.00 67.20 O
ATOM 2 P G B 63 100.825 35.751 10.886 1.00 68.28 P
ATOM 3 OP1 G B 63 99.455 35.155 10.822 1.00 67.15 O
ATOM 4 OP2 G B 63 101.226 36.604 12.039 1.00 65.89 O
ATOM 5 O5' G B 63 101.891 34.596 10.732 1.00 67.29 O
ATOM 6 C5' G B 63 101.770 33.651 9.673 1.00 66.85 C
ATOM 7 C4' G B 63 103.044 32.882 9.525 1.00 67.04 C
ATOM 8 O4' G B 63 104.113 33.795 9.170 1.00 67.55 O
ATOM 9 C3' G B 63 103.565 32.200 10.772 1.00 68.14 C
ATOM 10 O3' G B 63 102.912 30.974 11.038 1.00 71.44 O
ATOM 11 C2' G B 63 105.046 32.028 10.445 1.00 66.93 C
ATOM 12 O2' G B 63 105.306 30.920 9.603 1.00 67.78 O
ATOM 13 C1' G B 63 105.344 33.315 9.681 1.00 64.44 C
ATOM 14 N9 G B 63 105.935 34.327 10.552 1.00 59.36 N
ATOM 15 C8 G B 63 105.290 35.317 11.252 1.00 57.20 C
ATOM 16 N7 G B 63 106.103 36.042 11.974 1.00 54.28 N
ATOM 17 C5 G B 63 107.356 35.502 11.731 1.00 53.63 C
ATOM 18 C6 G B 63 108.625 35.869 12.239 1.00 54.93 C
ATOM 19 O6 G B 63 108.901 36.760 13.045 1.00 56.97 O
ATOM 20 N1 G B 63 109.637 35.071 11.720 1.00 53.80 N
ATOM 21 C2 G B 63 109.446 34.041 10.836 1.00 55.99 C
ATOM 22 N2 G B 63 110.550 33.382 10.445 1.00 58.00 N
ATOM 23 N3 G B 63 108.263 33.679 10.367 1.00 55.64 N
ATOM 24 C4 G B 63 107.272 34.451 10.850 1.00 55.83 C
ATOM 25 P G B 64 103.303 30.138 12.361 1.00 72.74 P
ATOM 26 OP1 G B 64 102.402 28.944 12.353 1.00 71.92 O
ATOM 27 OP2 G B 64 103.311 31.072 13.518 1.00 71.44 O
ATOM 28 O5' G B 64 104.806 29.664 12.048 1.00 72.54 O
TER

Atoms:
OP1: (106.306,47.970,17.882)
OP2: (108.811,47.411,17.447)
C3': (104.733,44.713,17.432)
C1': (105.880,42.817,16.622)
C5': (105.749,46.040,15.512)
O6: (110.064,38.855,15.004)
O4': (105.627,43.626,15.499)
C8: (108.371,42.322,16.881)
C2: (106.601,39.243,14.326)
C6: (108.943,39.364,15.044)
C5: (108.531,40.542,15.718)
C4: (107.213,40.933,15.622)
P: (107.395,47.509,16.962)
C4': (104.938,44.835,15.922)
C2': (105.835,43.739,17.840)
O2': (105.536,43.035,19.022)
N1: (107.886,38.768,14.363)
N2: (105.724,38.532,13.607)
N3: (106.203,40.340,14.947)
N7: (109.252,41.426,16.512)
N9: (107.112,42.073,16.388)
O5': (106.948,46.125,16.320)
O3': (103.453,44.146,17.692)
OP1: (99.455,35.155,10.822)
OP2: (101.226,36.604,12.039)
C3': (103.565,32.200,10.772)
C1': (105.344,33.315,9.681)
C5': (101.770,33.651,9.673)
O6: (108.901,36.760,13.045)
O4': (104.113,33.795,9.170)
C8: (105.290,35.317,11.252)
C2: (109.446,34.041,10.836)
C6: (108.625,35.869,12.239)
C5: (107.356,35.502,11.731)
C4: (107.272,34.451,10.850)
P: (100.825,35.751,10.886)
C4': (103.044,32.882,9.525)
C2': (105.046,32.028,10.445)
O2': (105.306,30.920,9.603)
N1: (109.637,35.071,11.720)
N2: (110.550,33.382,10.445)
N3: (108.263,33.679,10.367)
N7: (106.103,36.042,11.974)
N9: (105.935,34.327,10.552)
O5': (101.891,34.596,10.732)
O3': (102.912,30.974,11.038)
Image (generated by PyMOL):
PyMOL image
show in jmol