Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:A47:A65
Extra
PDB:
ATOM 1 O3' U A 46 -4.368 -19.467 5.466 1.00 38.65 O
ATOM 2 P G A 47 -3.140 -20.373 5.992 1.00 34.26 P
ATOM 3 OP1 G A 47 -3.095 -21.595 5.197 1.00 46.09 O
ATOM 4 OP2 G A 47 -3.081 -20.371 7.474 1.00 31.40 O
ATOM 5 O5' G A 47 -1.959 -19.373 5.530 1.00 32.70 O
ATOM 6 C5' G A 47 -1.587 -19.266 4.136 1.00 29.26 C
ATOM 7 C4' G A 47 -0.468 -18.209 4.032 1.00 30.51 C
ATOM 8 O4' G A 47 -0.991 -16.910 4.557 1.00 32.81 O
ATOM 9 C3' G A 47 0.773 -18.395 4.882 1.00 30.96 C
ATOM 10 O3' G A 47 1.662 -19.237 4.222 1.00 38.21 O
ATOM 11 C2' G A 47 1.359 -16.939 5.030 1.00 33.54 C
ATOM 12 O2' G A 47 2.156 -16.468 3.920 1.00 32.09 O
ATOM 13 C1' G A 47 0.080 -16.125 5.085 1.00 28.39 C
ATOM 14 N9 G A 47 -0.329 -15.885 6.461 1.00 27.83 N
ATOM 15 C8 G A 47 -1.130 -16.618 7.243 1.00 28.91 C
ATOM 16 N7 G A 47 -1.353 -16.125 8.388 1.00 28.53 N
ATOM 17 C5 G A 47 -0.676 -14.934 8.351 1.00 24.07 C
ATOM 18 C6 G A 47 -0.569 -13.892 9.305 1.00 28.58 C
ATOM 19 O6 G A 47 -1.024 -13.815 10.413 1.00 28.69 O
ATOM 20 N1 G A 47 0.184 -12.830 8.832 1.00 23.38 N
ATOM 21 C2 G A 47 0.795 -12.737 7.605 1.00 24.61 C
ATOM 22 N2 G A 47 1.488 -11.592 7.378 1.00 29.73 N
ATOM 23 N3 G A 47 0.698 -13.698 6.684 1.00 23.68 N
ATOM 24 C4 G A 47 -0.055 -14.744 7.158 1.00 27.99 C
ATOM 25 P A A 48 1.865 -20.842 4.501 1.00 40.77 P
ATOM 26 OP1 A A 48 3.284 -20.997 4.149 1.00 49.27 O
ATOM 27 OP2 A A 48 0.759 -21.537 3.830 1.00 43.85 O
ATOM 28 O5' A A 48 1.654 -21.133 6.035 1.00 41.91 O
TER
ATOM 1 O3' C B 64 5.876 -8.697 6.890 1.00 44.42 O
ATOM 2 P G B 65 4.867 -7.653 6.139 1.00 49.11 P
ATOM 3 OP1 G B 65 3.563 -8.413 5.999 1.00 41.04 O
ATOM 4 OP2 G B 65 5.497 -7.223 4.888 1.00 48.90 O
ATOM 5 O5' G B 65 4.742 -6.457 7.235 1.00 35.08 O
ATOM 6 C5' G B 65 3.895 -5.280 6.899 1.00 35.67 C
ATOM 7 C4' G B 65 3.087 -4.642 8.037 1.00 37.38 C
ATOM 8 O4' G B 65 1.976 -5.478 8.486 1.00 33.51 O
ATOM 9 C3' G B 65 3.845 -4.327 9.343 1.00 34.88 C
ATOM 10 O3' G B 65 3.168 -3.296 9.861 1.00 36.74 O
ATOM 11 C2' G B 65 3.648 -5.661 10.150 1.00 34.81 C
ATOM 12 O2' G B 65 3.668 -5.508 11.565 1.00 32.02 O
ATOM 13 C1' G B 65 2.187 -5.882 9.858 1.00 31.55 C
ATOM 14 N9 G B 65 1.742 -7.242 9.994 1.00 35.32 N
ATOM 15 C8 G B 65 1.985 -8.221 9.071 1.00 29.29 C
ATOM 16 N7 G B 65 1.431 -9.322 9.401 1.00 30.90 N
ATOM 17 C5 G B 65 0.770 -9.037 10.607 1.00 29.62 C
ATOM 18 C6 G B 65 0.036 -9.929 11.426 1.00 30.09 C
ATOM 19 O6 G B 65 -0.146 -11.110 11.048 1.00 30.57 O
ATOM 20 N1 G B 65 -0.494 -9.340 12.579 1.00 27.41 N
ATOM 21 C2 G B 65 -0.217 -7.984 12.835 1.00 25.37 C
ATOM 22 N2 G B 65 -0.675 -7.418 13.939 1.00 20.56 N
ATOM 23 N3 G B 65 0.505 -7.206 12.108 1.00 24.32 N
ATOM 24 C4 G B 65 0.960 -7.795 10.997 1.00 26.99 C
ATOM 25 P C B 66 3.609 -1.694 9.779 1.00 43.00 P
ATOM 26 OP1 C B 66 5.007 -1.577 9.315 1.00 33.66 O
ATOM 27 OP2 C B 66 3.222 -1.199 11.087 1.00 43.40 O
ATOM 28 O5' C B 66 2.579 -1.067 8.756 1.00 26.45 O
TER
ATOM 2 P G A 47 -3.140 -20.373 5.992 1.00 34.26 P
ATOM 3 OP1 G A 47 -3.095 -21.595 5.197 1.00 46.09 O
ATOM 4 OP2 G A 47 -3.081 -20.371 7.474 1.00 31.40 O
ATOM 5 O5' G A 47 -1.959 -19.373 5.530 1.00 32.70 O
ATOM 6 C5' G A 47 -1.587 -19.266 4.136 1.00 29.26 C
ATOM 7 C4' G A 47 -0.468 -18.209 4.032 1.00 30.51 C
ATOM 8 O4' G A 47 -0.991 -16.910 4.557 1.00 32.81 O
ATOM 9 C3' G A 47 0.773 -18.395 4.882 1.00 30.96 C
ATOM 10 O3' G A 47 1.662 -19.237 4.222 1.00 38.21 O
ATOM 11 C2' G A 47 1.359 -16.939 5.030 1.00 33.54 C
ATOM 12 O2' G A 47 2.156 -16.468 3.920 1.00 32.09 O
ATOM 13 C1' G A 47 0.080 -16.125 5.085 1.00 28.39 C
ATOM 14 N9 G A 47 -0.329 -15.885 6.461 1.00 27.83 N
ATOM 15 C8 G A 47 -1.130 -16.618 7.243 1.00 28.91 C
ATOM 16 N7 G A 47 -1.353 -16.125 8.388 1.00 28.53 N
ATOM 17 C5 G A 47 -0.676 -14.934 8.351 1.00 24.07 C
ATOM 18 C6 G A 47 -0.569 -13.892 9.305 1.00 28.58 C
ATOM 19 O6 G A 47 -1.024 -13.815 10.413 1.00 28.69 O
ATOM 20 N1 G A 47 0.184 -12.830 8.832 1.00 23.38 N
ATOM 21 C2 G A 47 0.795 -12.737 7.605 1.00 24.61 C
ATOM 22 N2 G A 47 1.488 -11.592 7.378 1.00 29.73 N
ATOM 23 N3 G A 47 0.698 -13.698 6.684 1.00 23.68 N
ATOM 24 C4 G A 47 -0.055 -14.744 7.158 1.00 27.99 C
ATOM 25 P A A 48 1.865 -20.842 4.501 1.00 40.77 P
ATOM 26 OP1 A A 48 3.284 -20.997 4.149 1.00 49.27 O
ATOM 27 OP2 A A 48 0.759 -21.537 3.830 1.00 43.85 O
ATOM 28 O5' A A 48 1.654 -21.133 6.035 1.00 41.91 O
TER
ATOM 1 O3' C B 64 5.876 -8.697 6.890 1.00 44.42 O
ATOM 2 P G B 65 4.867 -7.653 6.139 1.00 49.11 P
ATOM 3 OP1 G B 65 3.563 -8.413 5.999 1.00 41.04 O
ATOM 4 OP2 G B 65 5.497 -7.223 4.888 1.00 48.90 O
ATOM 5 O5' G B 65 4.742 -6.457 7.235 1.00 35.08 O
ATOM 6 C5' G B 65 3.895 -5.280 6.899 1.00 35.67 C
ATOM 7 C4' G B 65 3.087 -4.642 8.037 1.00 37.38 C
ATOM 8 O4' G B 65 1.976 -5.478 8.486 1.00 33.51 O
ATOM 9 C3' G B 65 3.845 -4.327 9.343 1.00 34.88 C
ATOM 10 O3' G B 65 3.168 -3.296 9.861 1.00 36.74 O
ATOM 11 C2' G B 65 3.648 -5.661 10.150 1.00 34.81 C
ATOM 12 O2' G B 65 3.668 -5.508 11.565 1.00 32.02 O
ATOM 13 C1' G B 65 2.187 -5.882 9.858 1.00 31.55 C
ATOM 14 N9 G B 65 1.742 -7.242 9.994 1.00 35.32 N
ATOM 15 C8 G B 65 1.985 -8.221 9.071 1.00 29.29 C
ATOM 16 N7 G B 65 1.431 -9.322 9.401 1.00 30.90 N
ATOM 17 C5 G B 65 0.770 -9.037 10.607 1.00 29.62 C
ATOM 18 C6 G B 65 0.036 -9.929 11.426 1.00 30.09 C
ATOM 19 O6 G B 65 -0.146 -11.110 11.048 1.00 30.57 O
ATOM 20 N1 G B 65 -0.494 -9.340 12.579 1.00 27.41 N
ATOM 21 C2 G B 65 -0.217 -7.984 12.835 1.00 25.37 C
ATOM 22 N2 G B 65 -0.675 -7.418 13.939 1.00 20.56 N
ATOM 23 N3 G B 65 0.505 -7.206 12.108 1.00 24.32 N
ATOM 24 C4 G B 65 0.960 -7.795 10.997 1.00 26.99 C
ATOM 25 P C B 66 3.609 -1.694 9.779 1.00 43.00 P
ATOM 26 OP1 C B 66 5.007 -1.577 9.315 1.00 33.66 O
ATOM 27 OP2 C B 66 3.222 -1.199 11.087 1.00 43.40 O
ATOM 28 O5' C B 66 2.579 -1.067 8.756 1.00 26.45 O
TER
Atoms:
OP1: (-3.095,-21.595,5.197)
OP2: (-3.081,-20.371,7.474)
C3': (0.773,-18.395,4.882)
C1': (0.080,-16.125,5.085)
C5': (-1.587,-19.266,4.136)
O6: (-1.024,-13.815,10.413)
O4': (-0.991,-16.910,4.557)
C8: (-1.130,-16.618,7.243)
C2: (0.795,-12.737,7.605)
C6: (-0.569,-13.892,9.305)
C5: (-0.676,-14.934,8.351)
C4: (-0.055,-14.744,7.158)
P: (-3.140,-20.373,5.992)
C4': (-0.468,-18.209,4.032)
C2': (1.359,-16.939,5.030)
O2': (2.156,-16.468,3.920)
N1: (0.184,-12.830,8.832)
N2: (1.488,-11.592,7.378)
N3: (0.698,-13.698,6.684)
N7: (-1.353,-16.125,8.388)
N9: (-0.329,-15.885,6.461)
O5': (-1.959,-19.373,5.530)
O3': (1.662,-19.237,4.222)
OP2: (-3.081,-20.371,7.474)
C3': (0.773,-18.395,4.882)
C1': (0.080,-16.125,5.085)
C5': (-1.587,-19.266,4.136)
O6: (-1.024,-13.815,10.413)
O4': (-0.991,-16.910,4.557)
C8: (-1.130,-16.618,7.243)
C2: (0.795,-12.737,7.605)
C6: (-0.569,-13.892,9.305)
C5: (-0.676,-14.934,8.351)
C4: (-0.055,-14.744,7.158)
P: (-3.140,-20.373,5.992)
C4': (-0.468,-18.209,4.032)
C2': (1.359,-16.939,5.030)
O2': (2.156,-16.468,3.920)
N1: (0.184,-12.830,8.832)
N2: (1.488,-11.592,7.378)
N3: (0.698,-13.698,6.684)
N7: (-1.353,-16.125,8.388)
N9: (-0.329,-15.885,6.461)
O5': (-1.959,-19.373,5.530)
O3': (1.662,-19.237,4.222)
OP1: (3.563,-8.413,5.999)
OP2: (5.497,-7.223,4.888)
C3': (3.845,-4.327,9.343)
C1': (2.187,-5.882,9.858)
C5': (3.895,-5.280,6.899)
O6: (-0.146,-11.110,11.048)
O4': (1.976,-5.478,8.486)
C8: (1.985,-8.221,9.071)
C2: (-0.217,-7.984,12.835)
C6: (0.036,-9.929,11.426)
C5: (0.770,-9.037,10.607)
C4: (0.960,-7.795,10.997)
P: (4.867,-7.653,6.139)
C4': (3.087,-4.642,8.037)
C2': (3.648,-5.661,10.150)
O2': (3.668,-5.508,11.565)
N1: (-0.494,-9.340,12.579)
N2: (-0.675,-7.418,13.939)
N3: (0.505,-7.206,12.108)
N7: (1.431,-9.322,9.401)
N9: (1.742,-7.242,9.994)
O5': (4.742,-6.457,7.235)
O3': (3.168,-3.296,9.861)
OP2: (5.497,-7.223,4.888)
C3': (3.845,-4.327,9.343)
C1': (2.187,-5.882,9.858)
C5': (3.895,-5.280,6.899)
O6: (-0.146,-11.110,11.048)
O4': (1.976,-5.478,8.486)
C8: (1.985,-8.221,9.071)
C2: (-0.217,-7.984,12.835)
C6: (0.036,-9.929,11.426)
C5: (0.770,-9.037,10.607)
C4: (0.960,-7.795,10.997)
P: (4.867,-7.653,6.139)
C4': (3.087,-4.642,8.037)
C2': (3.648,-5.661,10.150)
O2': (3.668,-5.508,11.565)
N1: (-0.494,-9.340,12.579)
N2: (-0.675,-7.418,13.939)
N3: (0.505,-7.206,12.108)
N7: (1.431,-9.322,9.401)
N9: (1.742,-7.242,9.994)
O5': (4.742,-6.457,7.235)
O3': (3.168,-3.296,9.861)
Image (generated by PyMOL):