Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A47:A65
Extra
PDB:
ATOM 1 O3' U A 46 -4.111 -36.056 22.121 1.00 17.49 O
ATOM 2 P G A 47 -2.902 -35.217 21.487 1.00 19.55 P
ATOM 3 OP1 G A 47 -2.792 -33.913 22.198 1.00 18.96 O
ATOM 4 OP2 G A 47 -3.081 -35.235 20.019 1.00 17.12 O
ATOM 5 O5' G A 47 -1.633 -36.109 21.851 1.00 19.34 O
ATOM 6 C5' G A 47 -1.277 -36.345 23.223 1.00 19.31 C
ATOM 7 C4' G A 47 -0.202 -37.394 23.314 1.00 20.25 C
ATOM 8 O4' G A 47 -0.737 -38.672 22.911 1.00 20.66 O
ATOM 9 C3' G A 47 1.020 -37.180 22.437 1.00 21.23 C
ATOM 10 O3' G A 47 1.996 -36.410 23.124 1.00 23.51 O
ATOM 11 C2' G A 47 1.549 -38.599 22.265 1.00 20.52 C
ATOM 12 O2' G A 47 2.312 -39.009 23.379 1.00 21.37 O
ATOM 13 C1' G A 47 0.266 -39.421 22.255 1.00 19.75 C
ATOM 14 N9 G A 47 -0.201 -39.742 20.914 1.00 18.46 N
ATOM 15 C8 G A 47 -1.008 -38.979 20.108 1.00 17.76 C
ATOM 16 N7 G A 47 -1.282 -39.552 18.973 1.00 16.81 N
ATOM 17 C5 G A 47 -0.608 -40.760 19.031 1.00 16.28 C
ATOM 18 C6 G A 47 -0.545 -41.804 18.102 1.00 16.50 C
ATOM 19 O6 G A 47 -1.087 -41.885 17.008 1.00 16.94 O
ATOM 20 N1 G A 47 0.240 -42.849 18.559 1.00 17.14 N
ATOM 21 C2 G A 47 0.876 -42.884 19.767 1.00 17.05 C
ATOM 22 N2 G A 47 1.565 -43.997 20.033 1.00 17.99 N
ATOM 23 N3 G A 47 0.830 -41.908 20.650 1.00 17.46 N
ATOM 24 C4 G A 47 0.071 -40.885 20.218 1.00 17.41 C
ATOM 25 P A A 48 2.029 -34.816 22.966 1.00 24.93 P
ATOM 26 OP1 A A 48 3.379 -34.383 23.388 1.00 24.77 O
ATOM 27 OP2 A A 48 0.837 -34.302 23.683 1.00 25.26 O
ATOM 28 O5' A A 48 1.862 -34.536 21.405 1.00 23.07 O
TER
ATOM 1 O3' C B 64 5.953 -47.270 20.467 1.00 24.12 O
ATOM 2 P G B 65 4.866 -48.235 21.159 1.00 26.08 P
ATOM 3 OP1 G B 65 3.584 -47.476 21.251 1.00 26.22 O
ATOM 4 OP2 G B 65 5.509 -48.734 22.400 1.00 24.89 O
ATOM 5 O5' G B 65 4.692 -49.445 20.132 1.00 23.65 O
ATOM 6 C5' G B 65 3.959 -50.625 20.509 1.00 24.52 C
ATOM 7 C4' G B 65 3.115 -51.127 19.354 1.00 24.30 C
ATOM 8 O4' G B 65 2.059 -50.176 19.081 1.00 23.64 O
ATOM 9 C3' G B 65 3.847 -51.366 18.036 1.00 24.66 C
ATOM 10 O3' G B 65 3.241 -52.461 17.342 1.00 26.72 O
ATOM 11 C2' G B 65 3.534 -50.097 17.250 1.00 23.94 C
ATOM 12 O2' G B 65 3.534 -50.305 15.856 1.00 24.81 O
ATOM 13 C1' G B 65 2.118 -49.784 17.730 1.00 23.01 C
ATOM 14 N9 G B 65 1.735 -48.379 17.635 1.00 21.45 N
ATOM 15 C8 G B 65 2.064 -47.358 18.493 1.00 20.63 C
ATOM 16 N7 G B 65 1.548 -46.212 18.143 1.00 21.35 N
ATOM 17 C5 G B 65 0.836 -46.495 16.981 1.00 20.21 C
ATOM 18 C6 G B 65 0.055 -45.650 16.140 1.00 19.38 C
ATOM 19 O6 G B 65 -0.178 -44.432 16.252 1.00 18.44 O
ATOM 20 N1 G B 65 -0.479 -46.355 15.076 1.00 18.02 N
ATOM 21 C2 G B 65 -0.290 -47.683 14.833 1.00 18.49 C
ATOM 22 N2 G B 65 -0.871 -48.162 13.733 1.00 18.99 N
ATOM 23 N3 G B 65 0.417 -48.481 15.602 1.00 19.72 N
ATOM 24 C4 G B 65 0.949 -47.825 16.653 1.00 20.09 C
ATOM 25 P C B 66 3.653 -53.985 17.682 1.00 27.82 P
ATOM 26 OP1 C B 66 5.002 -54.003 18.317 1.00 28.52 O
ATOM 27 OP2 C B 66 3.402 -54.793 16.464 1.00 29.59 O
ATOM 28 O5' C B 66 2.576 -54.451 18.753 1.00 26.03 O
TER
ATOM 2 P G A 47 -2.902 -35.217 21.487 1.00 19.55 P
ATOM 3 OP1 G A 47 -2.792 -33.913 22.198 1.00 18.96 O
ATOM 4 OP2 G A 47 -3.081 -35.235 20.019 1.00 17.12 O
ATOM 5 O5' G A 47 -1.633 -36.109 21.851 1.00 19.34 O
ATOM 6 C5' G A 47 -1.277 -36.345 23.223 1.00 19.31 C
ATOM 7 C4' G A 47 -0.202 -37.394 23.314 1.00 20.25 C
ATOM 8 O4' G A 47 -0.737 -38.672 22.911 1.00 20.66 O
ATOM 9 C3' G A 47 1.020 -37.180 22.437 1.00 21.23 C
ATOM 10 O3' G A 47 1.996 -36.410 23.124 1.00 23.51 O
ATOM 11 C2' G A 47 1.549 -38.599 22.265 1.00 20.52 C
ATOM 12 O2' G A 47 2.312 -39.009 23.379 1.00 21.37 O
ATOM 13 C1' G A 47 0.266 -39.421 22.255 1.00 19.75 C
ATOM 14 N9 G A 47 -0.201 -39.742 20.914 1.00 18.46 N
ATOM 15 C8 G A 47 -1.008 -38.979 20.108 1.00 17.76 C
ATOM 16 N7 G A 47 -1.282 -39.552 18.973 1.00 16.81 N
ATOM 17 C5 G A 47 -0.608 -40.760 19.031 1.00 16.28 C
ATOM 18 C6 G A 47 -0.545 -41.804 18.102 1.00 16.50 C
ATOM 19 O6 G A 47 -1.087 -41.885 17.008 1.00 16.94 O
ATOM 20 N1 G A 47 0.240 -42.849 18.559 1.00 17.14 N
ATOM 21 C2 G A 47 0.876 -42.884 19.767 1.00 17.05 C
ATOM 22 N2 G A 47 1.565 -43.997 20.033 1.00 17.99 N
ATOM 23 N3 G A 47 0.830 -41.908 20.650 1.00 17.46 N
ATOM 24 C4 G A 47 0.071 -40.885 20.218 1.00 17.41 C
ATOM 25 P A A 48 2.029 -34.816 22.966 1.00 24.93 P
ATOM 26 OP1 A A 48 3.379 -34.383 23.388 1.00 24.77 O
ATOM 27 OP2 A A 48 0.837 -34.302 23.683 1.00 25.26 O
ATOM 28 O5' A A 48 1.862 -34.536 21.405 1.00 23.07 O
TER
ATOM 1 O3' C B 64 5.953 -47.270 20.467 1.00 24.12 O
ATOM 2 P G B 65 4.866 -48.235 21.159 1.00 26.08 P
ATOM 3 OP1 G B 65 3.584 -47.476 21.251 1.00 26.22 O
ATOM 4 OP2 G B 65 5.509 -48.734 22.400 1.00 24.89 O
ATOM 5 O5' G B 65 4.692 -49.445 20.132 1.00 23.65 O
ATOM 6 C5' G B 65 3.959 -50.625 20.509 1.00 24.52 C
ATOM 7 C4' G B 65 3.115 -51.127 19.354 1.00 24.30 C
ATOM 8 O4' G B 65 2.059 -50.176 19.081 1.00 23.64 O
ATOM 9 C3' G B 65 3.847 -51.366 18.036 1.00 24.66 C
ATOM 10 O3' G B 65 3.241 -52.461 17.342 1.00 26.72 O
ATOM 11 C2' G B 65 3.534 -50.097 17.250 1.00 23.94 C
ATOM 12 O2' G B 65 3.534 -50.305 15.856 1.00 24.81 O
ATOM 13 C1' G B 65 2.118 -49.784 17.730 1.00 23.01 C
ATOM 14 N9 G B 65 1.735 -48.379 17.635 1.00 21.45 N
ATOM 15 C8 G B 65 2.064 -47.358 18.493 1.00 20.63 C
ATOM 16 N7 G B 65 1.548 -46.212 18.143 1.00 21.35 N
ATOM 17 C5 G B 65 0.836 -46.495 16.981 1.00 20.21 C
ATOM 18 C6 G B 65 0.055 -45.650 16.140 1.00 19.38 C
ATOM 19 O6 G B 65 -0.178 -44.432 16.252 1.00 18.44 O
ATOM 20 N1 G B 65 -0.479 -46.355 15.076 1.00 18.02 N
ATOM 21 C2 G B 65 -0.290 -47.683 14.833 1.00 18.49 C
ATOM 22 N2 G B 65 -0.871 -48.162 13.733 1.00 18.99 N
ATOM 23 N3 G B 65 0.417 -48.481 15.602 1.00 19.72 N
ATOM 24 C4 G B 65 0.949 -47.825 16.653 1.00 20.09 C
ATOM 25 P C B 66 3.653 -53.985 17.682 1.00 27.82 P
ATOM 26 OP1 C B 66 5.002 -54.003 18.317 1.00 28.52 O
ATOM 27 OP2 C B 66 3.402 -54.793 16.464 1.00 29.59 O
ATOM 28 O5' C B 66 2.576 -54.451 18.753 1.00 26.03 O
TER
Atoms:
OP1: (-2.792,-33.913,22.198)
OP2: (-3.081,-35.235,20.019)
C3': (1.020,-37.180,22.437)
C1': (0.266,-39.421,22.255)
C5': (-1.277,-36.345,23.223)
O6: (-1.087,-41.885,17.008)
O4': (-0.737,-38.672,22.911)
C8: (-1.008,-38.979,20.108)
C2: (0.876,-42.884,19.767)
C6: (-0.545,-41.804,18.102)
C5: (-0.608,-40.760,19.031)
C4: (0.071,-40.885,20.218)
P: (-2.902,-35.217,21.487)
C4': (-0.202,-37.394,23.314)
C2': (1.549,-38.599,22.265)
O2': (2.312,-39.009,23.379)
N1: (0.240,-42.849,18.559)
N2: (1.565,-43.997,20.033)
N3: (0.830,-41.908,20.650)
N7: (-1.282,-39.552,18.973)
N9: (-0.201,-39.742,20.914)
O5': (-1.633,-36.109,21.851)
O3': (1.996,-36.410,23.124)
OP2: (-3.081,-35.235,20.019)
C3': (1.020,-37.180,22.437)
C1': (0.266,-39.421,22.255)
C5': (-1.277,-36.345,23.223)
O6: (-1.087,-41.885,17.008)
O4': (-0.737,-38.672,22.911)
C8: (-1.008,-38.979,20.108)
C2: (0.876,-42.884,19.767)
C6: (-0.545,-41.804,18.102)
C5: (-0.608,-40.760,19.031)
C4: (0.071,-40.885,20.218)
P: (-2.902,-35.217,21.487)
C4': (-0.202,-37.394,23.314)
C2': (1.549,-38.599,22.265)
O2': (2.312,-39.009,23.379)
N1: (0.240,-42.849,18.559)
N2: (1.565,-43.997,20.033)
N3: (0.830,-41.908,20.650)
N7: (-1.282,-39.552,18.973)
N9: (-0.201,-39.742,20.914)
O5': (-1.633,-36.109,21.851)
O3': (1.996,-36.410,23.124)
OP1: (3.584,-47.476,21.251)
OP2: (5.509,-48.734,22.400)
C3': (3.847,-51.366,18.036)
C1': (2.118,-49.784,17.730)
C5': (3.959,-50.625,20.509)
O6: (-0.178,-44.432,16.252)
O4': (2.059,-50.176,19.081)
C8: (2.064,-47.358,18.493)
C2: (-0.290,-47.683,14.833)
C6: (0.055,-45.650,16.140)
C5: (0.836,-46.495,16.981)
C4: (0.949,-47.825,16.653)
P: (4.866,-48.235,21.159)
C4': (3.115,-51.127,19.354)
C2': (3.534,-50.097,17.250)
O2': (3.534,-50.305,15.856)
N1: (-0.479,-46.355,15.076)
N2: (-0.871,-48.162,13.733)
N3: (0.417,-48.481,15.602)
N7: (1.548,-46.212,18.143)
N9: (1.735,-48.379,17.635)
O5': (4.692,-49.445,20.132)
O3': (3.241,-52.461,17.342)
OP2: (5.509,-48.734,22.400)
C3': (3.847,-51.366,18.036)
C1': (2.118,-49.784,17.730)
C5': (3.959,-50.625,20.509)
O6: (-0.178,-44.432,16.252)
O4': (2.059,-50.176,19.081)
C8: (2.064,-47.358,18.493)
C2: (-0.290,-47.683,14.833)
C6: (0.055,-45.650,16.140)
C5: (0.836,-46.495,16.981)
C4: (0.949,-47.825,16.653)
P: (4.866,-48.235,21.159)
C4': (3.115,-51.127,19.354)
C2': (3.534,-50.097,17.250)
O2': (3.534,-50.305,15.856)
N1: (-0.479,-46.355,15.076)
N2: (-0.871,-48.162,13.733)
N3: (0.417,-48.481,15.602)
N7: (1.548,-46.212,18.143)
N9: (1.735,-48.379,17.635)
O5': (4.692,-49.445,20.132)
O3': (3.241,-52.461,17.342)
Image (generated by PyMOL):