Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B47:B65
Extra
PDB:
ATOM 1 O3' U A 46 -3.852 -19.334 7.952 1.00 19.20 O
ATOM 2 P G A 47 -2.569 -19.980 8.651 1.00 19.03 P
ATOM 3 OP1 G A 47 -2.265 -21.240 7.927 1.00 20.26 O
ATOM 4 OP2 G A 47 -2.837 -20.019 10.090 1.00 19.98 O
ATOM 5 O5' G A 47 -1.403 -18.927 8.388 1.00 21.02 O
ATOM 6 C5' G A 47 -0.837 -18.758 7.075 1.00 21.82 C
ATOM 7 C4' G A 47 0.152 -17.624 7.075 1.00 22.56 C
ATOM 8 O4' G A 47 -0.545 -16.409 7.438 1.00 24.01 O
ATOM 9 C3' G A 47 1.300 -17.720 8.071 1.00 23.01 C
ATOM 10 O3' G A 47 2.413 -18.409 7.522 1.00 22.97 O
ATOM 11 C2' G A 47 1.676 -16.256 8.260 1.00 23.64 C
ATOM 12 O2' G A 47 2.474 -15.794 7.183 1.00 24.50 O
ATOM 13 C1' G A 47 0.316 -15.563 8.175 1.00 23.43 C
ATOM 14 N9 G A 47 -0.296 -15.312 9.475 1.00 23.53 N
ATOM 15 C8 G A 47 -1.032 -16.197 10.233 1.00 23.78 C
ATOM 16 N7 G A 47 -1.470 -15.677 11.347 1.00 22.95 N
ATOM 17 C5 G A 47 -0.991 -14.375 11.326 1.00 24.24 C
ATOM 18 C6 G A 47 -1.152 -13.333 12.258 1.00 25.62 C
ATOM 19 O6 G A 47 -1.766 -13.349 13.321 1.00 28.13 O
ATOM 20 N1 G A 47 -0.509 -12.175 11.849 1.00 25.20 N
ATOM 21 C2 G A 47 0.200 -12.037 10.688 1.00 25.17 C
ATOM 22 N2 G A 47 0.750 -10.830 10.474 1.00 25.88 N
ATOM 23 N3 G A 47 0.359 -13.003 9.802 1.00 24.24 N
ATOM 24 C4 G A 47 -0.260 -14.136 10.182 1.00 23.65 C
ATOM 25 P A A 48 2.562 -19.994 7.720 1.00 23.44 P
ATOM 26 OP1 A A 48 3.997 -20.309 7.573 1.00 24.71 O
ATOM 27 OP2 A A 48 1.568 -20.637 6.823 1.00 23.96 O
ATOM 28 O5' A A 48 2.158 -20.288 9.232 1.00 22.97 O
TER
ATOM 1 O3' C B 64 5.065 -7.272 10.873 1.00 28.48 O
ATOM 2 P G B 65 4.013 -6.509 9.942 1.00 28.27 P
ATOM 3 OP1 G B 65 2.976 -7.478 9.517 1.00 28.57 O
ATOM 4 OP2 G B 65 4.793 -5.776 8.921 1.00 28.15 O
ATOM 5 O5' G B 65 3.354 -5.448 10.924 1.00 29.02 O
ATOM 6 C5' G B 65 2.693 -4.275 10.416 1.00 29.17 C
ATOM 7 C4' G B 65 1.721 -3.751 11.440 1.00 29.33 C
ATOM 8 O4' G B 65 0.663 -4.725 11.604 1.00 29.39 O
ATOM 9 C3' G B 65 2.320 -3.516 12.825 1.00 30.25 C
ATOM 10 O3' G B 65 1.691 -2.410 13.444 1.00 31.32 O
ATOM 11 C2' G B 65 1.939 -4.770 13.592 1.00 29.68 C
ATOM 12 O2' G B 65 1.745 -4.497 14.959 1.00 29.86 O
ATOM 13 C1' G B 65 0.605 -5.138 12.948 1.00 29.53 C
ATOM 14 N9 G B 65 0.373 -6.571 12.961 1.00 29.39 N
ATOM 15 C8 G B 65 0.929 -7.514 12.133 1.00 29.81 C
ATOM 16 N7 G B 65 0.507 -8.722 12.382 1.00 30.54 N
ATOM 17 C5 G B 65 -0.377 -8.561 13.441 1.00 30.10 C
ATOM 18 C6 G B 65 -1.150 -9.515 14.147 1.00 30.27 C
ATOM 19 O6 G B 65 -1.221 -10.742 13.969 1.00 28.76 O
ATOM 20 N1 G B 65 -1.893 -8.914 15.156 1.00 30.21 N
ATOM 21 C2 G B 65 -1.893 -7.578 15.453 1.00 29.86 C
ATOM 22 N2 G B 65 -2.670 -7.194 16.473 1.00 29.46 N
ATOM 23 N3 G B 65 -1.184 -6.684 14.800 1.00 29.83 N
ATOM 24 C4 G B 65 -0.457 -7.240 13.814 1.00 29.40 C
ATOM 25 P C B 66 2.278 -0.946 13.210 1.00 31.53 P
ATOM 26 OP1 C B 66 3.758 -0.986 13.370 1.00 30.34 O
ATOM 27 OP2 C B 66 1.466 -0.053 14.071 1.00 33.43 O
ATOM 28 O5' C B 66 1.904 -0.652 11.690 1.00 31.82 O
TER
ATOM 2 P G A 47 -2.569 -19.980 8.651 1.00 19.03 P
ATOM 3 OP1 G A 47 -2.265 -21.240 7.927 1.00 20.26 O
ATOM 4 OP2 G A 47 -2.837 -20.019 10.090 1.00 19.98 O
ATOM 5 O5' G A 47 -1.403 -18.927 8.388 1.00 21.02 O
ATOM 6 C5' G A 47 -0.837 -18.758 7.075 1.00 21.82 C
ATOM 7 C4' G A 47 0.152 -17.624 7.075 1.00 22.56 C
ATOM 8 O4' G A 47 -0.545 -16.409 7.438 1.00 24.01 O
ATOM 9 C3' G A 47 1.300 -17.720 8.071 1.00 23.01 C
ATOM 10 O3' G A 47 2.413 -18.409 7.522 1.00 22.97 O
ATOM 11 C2' G A 47 1.676 -16.256 8.260 1.00 23.64 C
ATOM 12 O2' G A 47 2.474 -15.794 7.183 1.00 24.50 O
ATOM 13 C1' G A 47 0.316 -15.563 8.175 1.00 23.43 C
ATOM 14 N9 G A 47 -0.296 -15.312 9.475 1.00 23.53 N
ATOM 15 C8 G A 47 -1.032 -16.197 10.233 1.00 23.78 C
ATOM 16 N7 G A 47 -1.470 -15.677 11.347 1.00 22.95 N
ATOM 17 C5 G A 47 -0.991 -14.375 11.326 1.00 24.24 C
ATOM 18 C6 G A 47 -1.152 -13.333 12.258 1.00 25.62 C
ATOM 19 O6 G A 47 -1.766 -13.349 13.321 1.00 28.13 O
ATOM 20 N1 G A 47 -0.509 -12.175 11.849 1.00 25.20 N
ATOM 21 C2 G A 47 0.200 -12.037 10.688 1.00 25.17 C
ATOM 22 N2 G A 47 0.750 -10.830 10.474 1.00 25.88 N
ATOM 23 N3 G A 47 0.359 -13.003 9.802 1.00 24.24 N
ATOM 24 C4 G A 47 -0.260 -14.136 10.182 1.00 23.65 C
ATOM 25 P A A 48 2.562 -19.994 7.720 1.00 23.44 P
ATOM 26 OP1 A A 48 3.997 -20.309 7.573 1.00 24.71 O
ATOM 27 OP2 A A 48 1.568 -20.637 6.823 1.00 23.96 O
ATOM 28 O5' A A 48 2.158 -20.288 9.232 1.00 22.97 O
TER
ATOM 1 O3' C B 64 5.065 -7.272 10.873 1.00 28.48 O
ATOM 2 P G B 65 4.013 -6.509 9.942 1.00 28.27 P
ATOM 3 OP1 G B 65 2.976 -7.478 9.517 1.00 28.57 O
ATOM 4 OP2 G B 65 4.793 -5.776 8.921 1.00 28.15 O
ATOM 5 O5' G B 65 3.354 -5.448 10.924 1.00 29.02 O
ATOM 6 C5' G B 65 2.693 -4.275 10.416 1.00 29.17 C
ATOM 7 C4' G B 65 1.721 -3.751 11.440 1.00 29.33 C
ATOM 8 O4' G B 65 0.663 -4.725 11.604 1.00 29.39 O
ATOM 9 C3' G B 65 2.320 -3.516 12.825 1.00 30.25 C
ATOM 10 O3' G B 65 1.691 -2.410 13.444 1.00 31.32 O
ATOM 11 C2' G B 65 1.939 -4.770 13.592 1.00 29.68 C
ATOM 12 O2' G B 65 1.745 -4.497 14.959 1.00 29.86 O
ATOM 13 C1' G B 65 0.605 -5.138 12.948 1.00 29.53 C
ATOM 14 N9 G B 65 0.373 -6.571 12.961 1.00 29.39 N
ATOM 15 C8 G B 65 0.929 -7.514 12.133 1.00 29.81 C
ATOM 16 N7 G B 65 0.507 -8.722 12.382 1.00 30.54 N
ATOM 17 C5 G B 65 -0.377 -8.561 13.441 1.00 30.10 C
ATOM 18 C6 G B 65 -1.150 -9.515 14.147 1.00 30.27 C
ATOM 19 O6 G B 65 -1.221 -10.742 13.969 1.00 28.76 O
ATOM 20 N1 G B 65 -1.893 -8.914 15.156 1.00 30.21 N
ATOM 21 C2 G B 65 -1.893 -7.578 15.453 1.00 29.86 C
ATOM 22 N2 G B 65 -2.670 -7.194 16.473 1.00 29.46 N
ATOM 23 N3 G B 65 -1.184 -6.684 14.800 1.00 29.83 N
ATOM 24 C4 G B 65 -0.457 -7.240 13.814 1.00 29.40 C
ATOM 25 P C B 66 2.278 -0.946 13.210 1.00 31.53 P
ATOM 26 OP1 C B 66 3.758 -0.986 13.370 1.00 30.34 O
ATOM 27 OP2 C B 66 1.466 -0.053 14.071 1.00 33.43 O
ATOM 28 O5' C B 66 1.904 -0.652 11.690 1.00 31.82 O
TER
Atoms:
OP1: (-2.265,-21.240,7.927)
OP2: (-2.837,-20.019,10.090)
C3': (1.300,-17.720,8.071)
C1': (0.316,-15.563,8.175)
C5': (-0.837,-18.758,7.075)
O6: (-1.766,-13.349,13.321)
O4': (-0.545,-16.409,7.438)
C8: (-1.032,-16.197,10.233)
C2: (0.200,-12.037,10.688)
C6: (-1.152,-13.333,12.258)
C5: (-0.991,-14.375,11.326)
C4: (-0.260,-14.136,10.182)
P: (-2.569,-19.980,8.651)
C4': (0.152,-17.624,7.075)
C2': (1.676,-16.256,8.260)
O2': (2.474,-15.794,7.183)
N1: (-0.509,-12.175,11.849)
N2: (0.750,-10.830,10.474)
N3: (0.359,-13.003,9.802)
N7: (-1.470,-15.677,11.347)
N9: (-0.296,-15.312,9.475)
O5': (-1.403,-18.927,8.388)
O3': (2.413,-18.409,7.522)
OP2: (-2.837,-20.019,10.090)
C3': (1.300,-17.720,8.071)
C1': (0.316,-15.563,8.175)
C5': (-0.837,-18.758,7.075)
O6: (-1.766,-13.349,13.321)
O4': (-0.545,-16.409,7.438)
C8: (-1.032,-16.197,10.233)
C2: (0.200,-12.037,10.688)
C6: (-1.152,-13.333,12.258)
C5: (-0.991,-14.375,11.326)
C4: (-0.260,-14.136,10.182)
P: (-2.569,-19.980,8.651)
C4': (0.152,-17.624,7.075)
C2': (1.676,-16.256,8.260)
O2': (2.474,-15.794,7.183)
N1: (-0.509,-12.175,11.849)
N2: (0.750,-10.830,10.474)
N3: (0.359,-13.003,9.802)
N7: (-1.470,-15.677,11.347)
N9: (-0.296,-15.312,9.475)
O5': (-1.403,-18.927,8.388)
O3': (2.413,-18.409,7.522)
OP1: (2.976,-7.478,9.517)
OP2: (4.793,-5.776,8.921)
C3': (2.320,-3.516,12.825)
C1': (0.605,-5.138,12.948)
C5': (2.693,-4.275,10.416)
O6: (-1.221,-10.742,13.969)
O4': (0.663,-4.725,11.604)
C8: (0.929,-7.514,12.133)
C2: (-1.893,-7.578,15.453)
C6: (-1.150,-9.515,14.147)
C5: (-0.377,-8.561,13.441)
C4: (-0.457,-7.240,13.814)
P: (4.013,-6.509,9.942)
C4': (1.721,-3.751,11.440)
C2': (1.939,-4.770,13.592)
O2': (1.745,-4.497,14.959)
N1: (-1.893,-8.914,15.156)
N2: (-2.670,-7.194,16.473)
N3: (-1.184,-6.684,14.800)
N7: (0.507,-8.722,12.382)
N9: (0.373,-6.571,12.961)
O5': (3.354,-5.448,10.924)
O3': (1.691,-2.410,13.444)
OP2: (4.793,-5.776,8.921)
C3': (2.320,-3.516,12.825)
C1': (0.605,-5.138,12.948)
C5': (2.693,-4.275,10.416)
O6: (-1.221,-10.742,13.969)
O4': (0.663,-4.725,11.604)
C8: (0.929,-7.514,12.133)
C2: (-1.893,-7.578,15.453)
C6: (-1.150,-9.515,14.147)
C5: (-0.377,-8.561,13.441)
C4: (-0.457,-7.240,13.814)
P: (4.013,-6.509,9.942)
C4': (1.721,-3.751,11.440)
C2': (1.939,-4.770,13.592)
O2': (1.745,-4.497,14.959)
N1: (-1.893,-8.914,15.156)
N2: (-2.670,-7.194,16.473)
N3: (-1.184,-6.684,14.800)
N7: (0.507,-8.722,12.382)
N9: (0.373,-6.571,12.961)
O5': (3.354,-5.448,10.924)
O3': (1.691,-2.410,13.444)
Image (generated by PyMOL):