Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A53:A81
Extra
PDB:
ATOM 1 O3' U A 52 -20.449 -74.175 46.814 1.00 61.17 O
ATOM 2 P G A 53 -19.868 -75.286 45.788 1.00 49.49 P
ATOM 3 OP1 G A 53 -18.442 -75.509 46.143 1.00 55.78 O
ATOM 4 OP2 G A 53 -20.231 -74.935 44.400 1.00 50.49 O
ATOM 5 O5' G A 53 -20.735 -76.556 46.192 1.00 53.43 O
ATOM 6 C5' G A 53 -20.610 -77.094 47.499 1.00 61.27 C
ATOM 7 C4' G A 53 -20.713 -78.603 47.407 1.00 59.16 C
ATOM 8 O4' G A 53 -22.045 -78.958 46.971 1.00 57.37 O
ATOM 9 C3' G A 53 -19.769 -79.262 46.407 1.00 60.53 C
ATOM 10 O3' G A 53 -19.337 -80.498 46.938 1.00 73.46 O
ATOM 11 C2' G A 53 -20.650 -79.488 45.189 1.00 62.33 C
ATOM 12 O2' G A 53 -20.184 -80.576 44.414 1.00 70.56 O
ATOM 13 C1' G A 53 -21.963 -79.843 45.880 1.00 64.75 C
ATOM 14 N9 G A 53 -23.171 -79.648 45.081 1.00 71.41 N
ATOM 15 C8 G A 53 -23.299 -78.962 43.896 1.00 65.99 C
ATOM 16 N7 G A 53 -24.514 -78.962 43.421 1.00 58.40 N
ATOM 17 C5 G A 53 -25.233 -79.683 44.359 1.00 55.29 C
ATOM 18 C6 G A 53 -26.595 -80.009 44.380 1.00 56.04 C
ATOM 19 O6 G A 53 -27.445 -79.702 43.540 1.00 62.39 O
ATOM 20 N1 G A 53 -26.930 -80.751 45.509 1.00 59.29 N
ATOM 21 C2 G A 53 -26.051 -81.135 46.492 1.00 60.53 C
ATOM 22 N2 G A 53 -26.552 -81.855 47.509 1.00 61.32 N
ATOM 23 N3 G A 53 -24.761 -80.836 46.478 1.00 61.06 N
ATOM 24 C4 G A 53 -24.429 -80.110 45.385 1.00 60.74 C
ATOM 25 P G A 54 -17.781 -80.794 47.019 1.00 53.78 P
ATOM 26 OP1 G A 54 -17.603 -82.229 47.343 1.00 57.87 O
ATOM 27 OP2 G A 54 -17.170 -79.759 47.894 1.00 43.01 O
ATOM 28 O5' G A 54 -17.335 -80.577 45.503 1.00 43.88 O
TER
ATOM 1 O3' C B 80 -24.869 -86.799 50.752 1.00 70.71 O
ATOM 2 P G B 81 -25.903 -87.084 49.548 1.00 65.01 P
ATOM 3 OP1 G B 81 -25.806 -88.495 49.135 1.00 71.60 O
ATOM 4 OP2 G B 81 -25.769 -86.014 48.535 1.00 58.08 O
ATOM 5 O5' G B 81 -27.301 -86.874 50.299 1.00 68.30 O
ATOM 6 C5' G B 81 -28.387 -87.727 50.013 1.00 51.52 C
ATOM 7 C4' G B 81 -29.684 -87.316 50.692 1.00 45.89 C
ATOM 8 O4' G B 81 -29.682 -85.975 51.255 1.00 49.88 O
ATOM 9 C3' G B 81 -30.816 -87.326 49.687 1.00 46.27 C
ATOM 10 O3' G B 81 -31.372 -88.601 49.687 1.00 45.47 O
ATOM 11 C2' G B 81 -31.790 -86.285 50.201 1.00 50.27 C
ATOM 12 O2' G B 81 -32.696 -86.835 51.132 1.00 60.49 O
ATOM 13 C1' G B 81 -30.816 -85.266 50.796 1.00 49.09 C
ATOM 14 N9 G B 81 -30.345 -84.391 49.737 1.00 55.57 N
ATOM 15 C8 G B 81 -29.046 -84.135 49.371 1.00 63.10 C
ATOM 16 N7 G B 81 -28.935 -83.320 48.358 1.00 58.68 N
ATOM 17 C5 G B 81 -30.245 -83.030 48.034 1.00 47.29 C
ATOM 18 C6 G B 81 -30.750 -82.200 47.029 1.00 47.18 C
ATOM 19 O6 G B 81 -30.105 -81.548 46.210 1.00 58.85 O
ATOM 20 N1 G B 81 -32.139 -82.167 47.036 1.00 53.56 N
ATOM 21 C2 G B 81 -32.939 -82.863 47.913 1.00 63.38 C
ATOM 22 N2 G B 81 -34.265 -82.725 47.779 1.00 66.53 N
ATOM 23 N3 G B 81 -32.472 -83.649 48.867 1.00 72.27 N
ATOM 24 C4 G B 81 -31.122 -83.679 48.865 1.00 56.69 C
ATOM 25 P G B 82 -31.195 -89.375 48.311 1.00 67.49 P
ATOM 26 OP1 G B 82 -31.372 -90.824 48.560 1.00 87.38 O
ATOM 27 OP2 G B 82 -29.957 -88.892 47.662 1.00 65.53 O
ATOM 28 O5' G B 82 -32.438 -88.808 47.502 1.00 79.25 O
TER
ATOM 2 P G A 53 -19.868 -75.286 45.788 1.00 49.49 P
ATOM 3 OP1 G A 53 -18.442 -75.509 46.143 1.00 55.78 O
ATOM 4 OP2 G A 53 -20.231 -74.935 44.400 1.00 50.49 O
ATOM 5 O5' G A 53 -20.735 -76.556 46.192 1.00 53.43 O
ATOM 6 C5' G A 53 -20.610 -77.094 47.499 1.00 61.27 C
ATOM 7 C4' G A 53 -20.713 -78.603 47.407 1.00 59.16 C
ATOM 8 O4' G A 53 -22.045 -78.958 46.971 1.00 57.37 O
ATOM 9 C3' G A 53 -19.769 -79.262 46.407 1.00 60.53 C
ATOM 10 O3' G A 53 -19.337 -80.498 46.938 1.00 73.46 O
ATOM 11 C2' G A 53 -20.650 -79.488 45.189 1.00 62.33 C
ATOM 12 O2' G A 53 -20.184 -80.576 44.414 1.00 70.56 O
ATOM 13 C1' G A 53 -21.963 -79.843 45.880 1.00 64.75 C
ATOM 14 N9 G A 53 -23.171 -79.648 45.081 1.00 71.41 N
ATOM 15 C8 G A 53 -23.299 -78.962 43.896 1.00 65.99 C
ATOM 16 N7 G A 53 -24.514 -78.962 43.421 1.00 58.40 N
ATOM 17 C5 G A 53 -25.233 -79.683 44.359 1.00 55.29 C
ATOM 18 C6 G A 53 -26.595 -80.009 44.380 1.00 56.04 C
ATOM 19 O6 G A 53 -27.445 -79.702 43.540 1.00 62.39 O
ATOM 20 N1 G A 53 -26.930 -80.751 45.509 1.00 59.29 N
ATOM 21 C2 G A 53 -26.051 -81.135 46.492 1.00 60.53 C
ATOM 22 N2 G A 53 -26.552 -81.855 47.509 1.00 61.32 N
ATOM 23 N3 G A 53 -24.761 -80.836 46.478 1.00 61.06 N
ATOM 24 C4 G A 53 -24.429 -80.110 45.385 1.00 60.74 C
ATOM 25 P G A 54 -17.781 -80.794 47.019 1.00 53.78 P
ATOM 26 OP1 G A 54 -17.603 -82.229 47.343 1.00 57.87 O
ATOM 27 OP2 G A 54 -17.170 -79.759 47.894 1.00 43.01 O
ATOM 28 O5' G A 54 -17.335 -80.577 45.503 1.00 43.88 O
TER
ATOM 1 O3' C B 80 -24.869 -86.799 50.752 1.00 70.71 O
ATOM 2 P G B 81 -25.903 -87.084 49.548 1.00 65.01 P
ATOM 3 OP1 G B 81 -25.806 -88.495 49.135 1.00 71.60 O
ATOM 4 OP2 G B 81 -25.769 -86.014 48.535 1.00 58.08 O
ATOM 5 O5' G B 81 -27.301 -86.874 50.299 1.00 68.30 O
ATOM 6 C5' G B 81 -28.387 -87.727 50.013 1.00 51.52 C
ATOM 7 C4' G B 81 -29.684 -87.316 50.692 1.00 45.89 C
ATOM 8 O4' G B 81 -29.682 -85.975 51.255 1.00 49.88 O
ATOM 9 C3' G B 81 -30.816 -87.326 49.687 1.00 46.27 C
ATOM 10 O3' G B 81 -31.372 -88.601 49.687 1.00 45.47 O
ATOM 11 C2' G B 81 -31.790 -86.285 50.201 1.00 50.27 C
ATOM 12 O2' G B 81 -32.696 -86.835 51.132 1.00 60.49 O
ATOM 13 C1' G B 81 -30.816 -85.266 50.796 1.00 49.09 C
ATOM 14 N9 G B 81 -30.345 -84.391 49.737 1.00 55.57 N
ATOM 15 C8 G B 81 -29.046 -84.135 49.371 1.00 63.10 C
ATOM 16 N7 G B 81 -28.935 -83.320 48.358 1.00 58.68 N
ATOM 17 C5 G B 81 -30.245 -83.030 48.034 1.00 47.29 C
ATOM 18 C6 G B 81 -30.750 -82.200 47.029 1.00 47.18 C
ATOM 19 O6 G B 81 -30.105 -81.548 46.210 1.00 58.85 O
ATOM 20 N1 G B 81 -32.139 -82.167 47.036 1.00 53.56 N
ATOM 21 C2 G B 81 -32.939 -82.863 47.913 1.00 63.38 C
ATOM 22 N2 G B 81 -34.265 -82.725 47.779 1.00 66.53 N
ATOM 23 N3 G B 81 -32.472 -83.649 48.867 1.00 72.27 N
ATOM 24 C4 G B 81 -31.122 -83.679 48.865 1.00 56.69 C
ATOM 25 P G B 82 -31.195 -89.375 48.311 1.00 67.49 P
ATOM 26 OP1 G B 82 -31.372 -90.824 48.560 1.00 87.38 O
ATOM 27 OP2 G B 82 -29.957 -88.892 47.662 1.00 65.53 O
ATOM 28 O5' G B 82 -32.438 -88.808 47.502 1.00 79.25 O
TER
Atoms:
OP1: (-18.442,-75.509,46.143)
OP2: (-20.231,-74.935,44.400)
C3': (-19.769,-79.262,46.407)
C1': (-21.963,-79.843,45.880)
C5': (-20.610,-77.094,47.499)
O6: (-27.445,-79.702,43.540)
O4': (-22.045,-78.958,46.971)
C8: (-23.299,-78.962,43.896)
C2: (-26.051,-81.135,46.492)
C6: (-26.595,-80.009,44.380)
C5: (-25.233,-79.683,44.359)
C4: (-24.429,-80.110,45.385)
P: (-19.868,-75.286,45.788)
C4': (-20.713,-78.603,47.407)
C2': (-20.650,-79.488,45.189)
O2': (-20.184,-80.576,44.414)
N1: (-26.930,-80.751,45.509)
N2: (-26.552,-81.855,47.509)
N3: (-24.761,-80.836,46.478)
N7: (-24.514,-78.962,43.421)
N9: (-23.171,-79.648,45.081)
O5': (-20.735,-76.556,46.192)
O3': (-19.337,-80.498,46.938)
OP2: (-20.231,-74.935,44.400)
C3': (-19.769,-79.262,46.407)
C1': (-21.963,-79.843,45.880)
C5': (-20.610,-77.094,47.499)
O6: (-27.445,-79.702,43.540)
O4': (-22.045,-78.958,46.971)
C8: (-23.299,-78.962,43.896)
C2: (-26.051,-81.135,46.492)
C6: (-26.595,-80.009,44.380)
C5: (-25.233,-79.683,44.359)
C4: (-24.429,-80.110,45.385)
P: (-19.868,-75.286,45.788)
C4': (-20.713,-78.603,47.407)
C2': (-20.650,-79.488,45.189)
O2': (-20.184,-80.576,44.414)
N1: (-26.930,-80.751,45.509)
N2: (-26.552,-81.855,47.509)
N3: (-24.761,-80.836,46.478)
N7: (-24.514,-78.962,43.421)
N9: (-23.171,-79.648,45.081)
O5': (-20.735,-76.556,46.192)
O3': (-19.337,-80.498,46.938)
OP1: (-25.806,-88.495,49.135)
OP2: (-25.769,-86.014,48.535)
C3': (-30.816,-87.326,49.687)
C1': (-30.816,-85.266,50.796)
C5': (-28.387,-87.727,50.013)
O6: (-30.105,-81.548,46.210)
O4': (-29.682,-85.975,51.255)
C8: (-29.046,-84.135,49.371)
C2: (-32.939,-82.863,47.913)
C6: (-30.750,-82.200,47.029)
C5: (-30.245,-83.030,48.034)
C4: (-31.122,-83.679,48.865)
P: (-25.903,-87.084,49.548)
C4': (-29.684,-87.316,50.692)
C2': (-31.790,-86.285,50.201)
O2': (-32.696,-86.835,51.132)
N1: (-32.139,-82.167,47.036)
N2: (-34.265,-82.725,47.779)
N3: (-32.472,-83.649,48.867)
N7: (-28.935,-83.320,48.358)
N9: (-30.345,-84.391,49.737)
O5': (-27.301,-86.874,50.299)
O3': (-31.372,-88.601,49.687)
OP2: (-25.769,-86.014,48.535)
C3': (-30.816,-87.326,49.687)
C1': (-30.816,-85.266,50.796)
C5': (-28.387,-87.727,50.013)
O6: (-30.105,-81.548,46.210)
O4': (-29.682,-85.975,51.255)
C8: (-29.046,-84.135,49.371)
C2: (-32.939,-82.863,47.913)
C6: (-30.750,-82.200,47.029)
C5: (-30.245,-83.030,48.034)
C4: (-31.122,-83.679,48.865)
P: (-25.903,-87.084,49.548)
C4': (-29.684,-87.316,50.692)
C2': (-31.790,-86.285,50.201)
O2': (-32.696,-86.835,51.132)
N1: (-32.139,-82.167,47.036)
N2: (-34.265,-82.725,47.779)
N3: (-32.472,-83.649,48.867)
N7: (-28.935,-83.320,48.358)
N9: (-30.345,-84.391,49.737)
O5': (-27.301,-86.874,50.299)
O3': (-31.372,-88.601,49.687)
Image (generated by PyMOL):