Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IBK:B8:A4
Extra
PDB:
ATOM 1 O3' G A 7 -3.589 15.521 35.018 1.00 38.18 O
ATOM 2 P G A 8 -4.527 16.084 33.863 1.00 35.37 P
ATOM 3 OP1 G A 8 -5.823 15.403 34.005 1.00 39.98 O
ATOM 4 OP2 G A 8 -3.788 16.037 32.587 1.00 33.76 O
ATOM 5 O5' G A 8 -4.698 17.597 34.255 1.00 33.16 O
ATOM 6 C5' G A 8 -5.159 17.939 35.527 1.00 30.89 C
ATOM 7 C4' G A 8 -5.005 19.421 35.712 1.00 32.11 C
ATOM 8 O4' G A 8 -3.610 19.733 35.860 1.00 29.59 O
ATOM 9 C3' G A 8 -5.445 20.239 34.510 1.00 32.29 C
ATOM 10 O3' G A 8 -6.838 20.478 34.585 1.00 35.24 O
ATOM 11 C2' G A 8 -4.657 21.524 34.703 1.00 31.12 C
ATOM 12 O2' G A 8 -5.285 22.393 35.621 1.00 32.59 O
ATOM 13 C1' G A 8 -3.346 21.004 35.296 1.00 29.54 C
ATOM 14 N9 G A 8 -2.282 20.854 34.325 1.00 26.71 N
ATOM 15 C8 G A 8 -1.985 19.734 33.565 1.00 27.15 C
ATOM 16 N7 G A 8 -0.940 19.898 32.785 1.00 27.76 N
ATOM 17 C5 G A 8 -0.511 21.198 33.072 1.00 25.99 C
ATOM 18 C6 G A 8 0.583 21.930 32.565 1.00 26.18 C
ATOM 19 O6 G A 8 1.423 21.567 31.731 1.00 26.62 O
ATOM 20 N1 G A 8 0.643 23.222 33.117 1.00 26.03 N
ATOM 21 C2 G A 8 -0.245 23.725 34.058 1.00 24.03 C
ATOM 22 N2 G A 8 -0.027 24.991 34.504 1.00 22.07 N
ATOM 23 N3 G A 8 -1.262 23.040 34.538 1.00 23.30 N
ATOM 24 C4 G A 8 -1.336 21.794 34.010 1.00 25.38 C
ATOM 25 P U A 9 -7.731 20.538 33.263 1.00 30.99 P
ATOM 26 OP1 U A 9 -9.129 20.302 33.674 1.00 34.49 O
ATOM 27 OP2 U A 9 -7.098 19.683 32.249 1.00 29.35 O
ATOM 28 O5' U A 9 -7.586 22.052 32.773 1.00 29.47 O
TER
ATOM 1 O3' G B 3 0.607 29.672 38.411 1.00 18.31 O
ATOM 2 P G B 4 -0.359 30.149 37.242 1.00 16.72 P
ATOM 3 OP1 G B 4 -1.133 31.279 37.778 1.00 20.21 O
ATOM 4 OP2 G B 4 -1.041 28.967 36.691 1.00 16.10 O
ATOM 5 O5' G B 4 0.639 30.690 36.133 1.00 17.10 O
ATOM 6 C5' G B 4 1.512 31.774 36.424 1.00 15.41 C
ATOM 7 C4' G B 4 2.464 31.973 35.277 1.00 17.09 C
ATOM 8 O4' G B 4 3.102 30.706 35.016 1.00 15.82 O
ATOM 9 C3' G B 4 1.792 32.390 33.963 1.00 18.24 C
ATOM 10 O3' G B 4 2.623 33.288 33.243 1.00 22.43 O
ATOM 11 C2' G B 4 1.667 31.081 33.232 1.00 19.01 C
ATOM 12 O2' G B 4 1.657 31.245 31.829 1.00 18.29 O
ATOM 13 C1' G B 4 2.944 30.364 33.677 1.00 16.86 C
ATOM 14 N9 G B 4 2.832 28.902 33.547 1.00 14.09 N
ATOM 15 C8 G B 4 1.876 28.107 34.133 1.00 8.61 C
ATOM 16 N7 G B 4 1.927 26.880 33.754 1.00 12.11 N
ATOM 17 C5 G B 4 2.996 26.844 32.845 1.00 12.76 C
ATOM 18 C6 G B 4 3.509 25.759 32.083 1.00 12.85 C
ATOM 19 O6 G B 4 3.135 24.580 32.092 1.00 16.68 O
ATOM 20 N1 G B 4 4.560 26.147 31.247 1.00 14.80 N
ATOM 21 C2 G B 4 5.058 27.424 31.173 1.00 15.22 C
ATOM 22 N2 G B 4 6.090 27.618 30.311 1.00 14.59 N
ATOM 23 N3 G B 4 4.574 28.452 31.891 1.00 15.79 N
ATOM 24 C4 G B 4 3.536 28.084 32.688 1.00 10.13 C
ATOM 25 P U B 5 2.076 34.733 32.813 1.00 20.82 P
ATOM 26 OP1 U B 5 0.735 34.564 32.237 1.00 20.60 O
ATOM 27 OP2 U B 5 3.140 35.423 32.055 1.00 19.75 O
ATOM 28 O5' U B 5 1.905 35.460 34.186 1.00 19.98 O
TER
ATOM 2 P G A 8 -4.527 16.084 33.863 1.00 35.37 P
ATOM 3 OP1 G A 8 -5.823 15.403 34.005 1.00 39.98 O
ATOM 4 OP2 G A 8 -3.788 16.037 32.587 1.00 33.76 O
ATOM 5 O5' G A 8 -4.698 17.597 34.255 1.00 33.16 O
ATOM 6 C5' G A 8 -5.159 17.939 35.527 1.00 30.89 C
ATOM 7 C4' G A 8 -5.005 19.421 35.712 1.00 32.11 C
ATOM 8 O4' G A 8 -3.610 19.733 35.860 1.00 29.59 O
ATOM 9 C3' G A 8 -5.445 20.239 34.510 1.00 32.29 C
ATOM 10 O3' G A 8 -6.838 20.478 34.585 1.00 35.24 O
ATOM 11 C2' G A 8 -4.657 21.524 34.703 1.00 31.12 C
ATOM 12 O2' G A 8 -5.285 22.393 35.621 1.00 32.59 O
ATOM 13 C1' G A 8 -3.346 21.004 35.296 1.00 29.54 C
ATOM 14 N9 G A 8 -2.282 20.854 34.325 1.00 26.71 N
ATOM 15 C8 G A 8 -1.985 19.734 33.565 1.00 27.15 C
ATOM 16 N7 G A 8 -0.940 19.898 32.785 1.00 27.76 N
ATOM 17 C5 G A 8 -0.511 21.198 33.072 1.00 25.99 C
ATOM 18 C6 G A 8 0.583 21.930 32.565 1.00 26.18 C
ATOM 19 O6 G A 8 1.423 21.567 31.731 1.00 26.62 O
ATOM 20 N1 G A 8 0.643 23.222 33.117 1.00 26.03 N
ATOM 21 C2 G A 8 -0.245 23.725 34.058 1.00 24.03 C
ATOM 22 N2 G A 8 -0.027 24.991 34.504 1.00 22.07 N
ATOM 23 N3 G A 8 -1.262 23.040 34.538 1.00 23.30 N
ATOM 24 C4 G A 8 -1.336 21.794 34.010 1.00 25.38 C
ATOM 25 P U A 9 -7.731 20.538 33.263 1.00 30.99 P
ATOM 26 OP1 U A 9 -9.129 20.302 33.674 1.00 34.49 O
ATOM 27 OP2 U A 9 -7.098 19.683 32.249 1.00 29.35 O
ATOM 28 O5' U A 9 -7.586 22.052 32.773 1.00 29.47 O
TER
ATOM 1 O3' G B 3 0.607 29.672 38.411 1.00 18.31 O
ATOM 2 P G B 4 -0.359 30.149 37.242 1.00 16.72 P
ATOM 3 OP1 G B 4 -1.133 31.279 37.778 1.00 20.21 O
ATOM 4 OP2 G B 4 -1.041 28.967 36.691 1.00 16.10 O
ATOM 5 O5' G B 4 0.639 30.690 36.133 1.00 17.10 O
ATOM 6 C5' G B 4 1.512 31.774 36.424 1.00 15.41 C
ATOM 7 C4' G B 4 2.464 31.973 35.277 1.00 17.09 C
ATOM 8 O4' G B 4 3.102 30.706 35.016 1.00 15.82 O
ATOM 9 C3' G B 4 1.792 32.390 33.963 1.00 18.24 C
ATOM 10 O3' G B 4 2.623 33.288 33.243 1.00 22.43 O
ATOM 11 C2' G B 4 1.667 31.081 33.232 1.00 19.01 C
ATOM 12 O2' G B 4 1.657 31.245 31.829 1.00 18.29 O
ATOM 13 C1' G B 4 2.944 30.364 33.677 1.00 16.86 C
ATOM 14 N9 G B 4 2.832 28.902 33.547 1.00 14.09 N
ATOM 15 C8 G B 4 1.876 28.107 34.133 1.00 8.61 C
ATOM 16 N7 G B 4 1.927 26.880 33.754 1.00 12.11 N
ATOM 17 C5 G B 4 2.996 26.844 32.845 1.00 12.76 C
ATOM 18 C6 G B 4 3.509 25.759 32.083 1.00 12.85 C
ATOM 19 O6 G B 4 3.135 24.580 32.092 1.00 16.68 O
ATOM 20 N1 G B 4 4.560 26.147 31.247 1.00 14.80 N
ATOM 21 C2 G B 4 5.058 27.424 31.173 1.00 15.22 C
ATOM 22 N2 G B 4 6.090 27.618 30.311 1.00 14.59 N
ATOM 23 N3 G B 4 4.574 28.452 31.891 1.00 15.79 N
ATOM 24 C4 G B 4 3.536 28.084 32.688 1.00 10.13 C
ATOM 25 P U B 5 2.076 34.733 32.813 1.00 20.82 P
ATOM 26 OP1 U B 5 0.735 34.564 32.237 1.00 20.60 O
ATOM 27 OP2 U B 5 3.140 35.423 32.055 1.00 19.75 O
ATOM 28 O5' U B 5 1.905 35.460 34.186 1.00 19.98 O
TER
Atoms:
OP1: (-5.823,15.403,34.005)
OP2: (-3.788,16.037,32.587)
C3': (-5.445,20.239,34.510)
C1': (-3.346,21.004,35.296)
C5': (-5.159,17.939,35.527)
O6: (1.423,21.567,31.731)
O4': (-3.610,19.733,35.860)
C8: (-1.985,19.734,33.565)
C2: (-0.245,23.725,34.058)
C6: (0.583,21.930,32.565)
C5: (-0.511,21.198,33.072)
C4: (-1.336,21.794,34.010)
P: (-4.527,16.084,33.863)
C4': (-5.005,19.421,35.712)
C2': (-4.657,21.524,34.703)
O2': (-5.285,22.393,35.621)
N1: (0.643,23.222,33.117)
N2: (-0.027,24.991,34.504)
N3: (-1.262,23.040,34.538)
N7: (-0.940,19.898,32.785)
N9: (-2.282,20.854,34.325)
O5': (-4.698,17.597,34.255)
O3': (-6.838,20.478,34.585)
OP2: (-3.788,16.037,32.587)
C3': (-5.445,20.239,34.510)
C1': (-3.346,21.004,35.296)
C5': (-5.159,17.939,35.527)
O6: (1.423,21.567,31.731)
O4': (-3.610,19.733,35.860)
C8: (-1.985,19.734,33.565)
C2: (-0.245,23.725,34.058)
C6: (0.583,21.930,32.565)
C5: (-0.511,21.198,33.072)
C4: (-1.336,21.794,34.010)
P: (-4.527,16.084,33.863)
C4': (-5.005,19.421,35.712)
C2': (-4.657,21.524,34.703)
O2': (-5.285,22.393,35.621)
N1: (0.643,23.222,33.117)
N2: (-0.027,24.991,34.504)
N3: (-1.262,23.040,34.538)
N7: (-0.940,19.898,32.785)
N9: (-2.282,20.854,34.325)
O5': (-4.698,17.597,34.255)
O3': (-6.838,20.478,34.585)
OP1: (-1.133,31.279,37.778)
OP2: (-1.041,28.967,36.691)
C3': (1.792,32.390,33.963)
C1': (2.944,30.364,33.677)
C5': (1.512,31.774,36.424)
O6: (3.135,24.580,32.092)
O4': (3.102,30.706,35.016)
C8: (1.876,28.107,34.133)
C2: (5.058,27.424,31.173)
C6: (3.509,25.759,32.083)
C5: (2.996,26.844,32.845)
C4: (3.536,28.084,32.688)
P: (-0.359,30.149,37.242)
C4': (2.464,31.973,35.277)
C2': (1.667,31.081,33.232)
O2': (1.657,31.245,31.829)
N1: (4.560,26.147,31.247)
N2: (6.090,27.618,30.311)
N3: (4.574,28.452,31.891)
N7: (1.927,26.880,33.754)
N9: (2.832,28.902,33.547)
O5': (0.639,30.690,36.133)
O3': (2.623,33.288,33.243)
OP2: (-1.041,28.967,36.691)
C3': (1.792,32.390,33.963)
C1': (2.944,30.364,33.677)
C5': (1.512,31.774,36.424)
O6: (3.135,24.580,32.092)
O4': (3.102,30.706,35.016)
C8: (1.876,28.107,34.133)
C2: (5.058,27.424,31.173)
C6: (3.509,25.759,32.083)
C5: (2.996,26.844,32.845)
C4: (3.536,28.084,32.688)
P: (-0.359,30.149,37.242)
C4': (2.464,31.973,35.277)
C2': (1.667,31.081,33.232)
O2': (1.657,31.245,31.829)
N1: (4.560,26.147,31.247)
N2: (6.090,27.618,30.311)
N3: (4.574,28.452,31.891)
N7: (1.927,26.880,33.754)
N9: (2.832,28.902,33.547)
O5': (0.639,30.690,36.133)
O3': (2.623,33.288,33.243)
Image (generated by PyMOL):