Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IBK:B3:B7
Extra
PDB:
ATOM 1 O3' G A 2 12.375 17.614 25.497 1.00 34.31 O
ATOM 2 P G A 3 11.228 17.753 24.391 1.00 37.30 P
ATOM 3 OP1 G A 3 11.628 16.893 23.263 1.00 37.32 O
ATOM 4 OP2 G A 3 10.970 19.201 24.173 1.00 38.07 O
ATOM 5 O5' G A 3 9.937 17.109 25.076 1.00 30.35 O
ATOM 6 C5' G A 3 9.569 15.828 24.697 1.00 26.91 C
ATOM 7 C4' G A 3 8.436 15.315 25.538 1.00 25.36 C
ATOM 8 O4' G A 3 8.644 15.662 26.913 1.00 26.68 O
ATOM 9 C3' G A 3 7.101 15.919 25.243 1.00 24.52 C
ATOM 10 O3' G A 3 6.584 15.364 24.082 1.00 29.02 O
ATOM 11 C2' G A 3 6.335 15.466 26.472 1.00 24.13 C
ATOM 12 O2' G A 3 6.067 14.093 26.452 1.00 24.41 O
ATOM 13 C1' G A 3 7.366 15.739 27.549 1.00 24.76 C
ATOM 14 N9 G A 3 7.236 17.047 28.214 1.00 19.53 N
ATOM 15 C8 G A 3 8.024 18.158 28.021 1.00 15.71 C
ATOM 16 N7 G A 3 7.717 19.149 28.814 1.00 17.66 N
ATOM 17 C5 G A 3 6.663 18.651 29.584 1.00 16.71 C
ATOM 18 C6 G A 3 5.920 19.269 30.618 1.00 15.57 C
ATOM 19 O6 G A 3 6.071 20.392 31.080 1.00 21.78 O
ATOM 20 N1 G A 3 4.937 18.444 31.128 1.00 15.71 N
ATOM 21 C2 G A 3 4.706 17.146 30.709 1.00 18.24 C
ATOM 22 N2 G A 3 3.708 16.477 31.330 1.00 14.95 N
ATOM 23 N3 G A 3 5.400 16.550 29.742 1.00 17.09 N
ATOM 24 C4 G A 3 6.359 17.367 29.225 1.00 15.85 C
ATOM 25 P G A 4 5.633 16.214 23.111 1.00 26.82 P
ATOM 26 OP1 G A 4 5.854 15.728 21.732 1.00 30.53 O
ATOM 27 OP2 G A 4 5.795 17.653 23.416 1.00 30.72 O
ATOM 28 O5' G A 4 4.200 15.763 23.591 1.00 26.97 O
TER
ATOM 1 O3' G B 6 0.694 11.717 33.202 1.00 42.70 O
ATOM 2 P G B 7 -0.443 12.617 32.491 1.00 39.50 P
ATOM 3 OP1 G B 7 -1.649 11.774 32.357 1.00 41.47 O
ATOM 4 OP2 G B 7 0.163 13.272 31.290 1.00 36.20 O
ATOM 5 O5' G B 7 -0.744 13.727 33.571 1.00 36.38 O
ATOM 6 C5' G B 7 -1.321 13.348 34.785 1.00 34.97 C
ATOM 7 C4' G B 7 -1.520 14.561 35.646 1.00 36.43 C
ATOM 8 O4' G B 7 -0.239 15.105 36.000 1.00 34.42 O
ATOM 9 C3' G B 7 -2.213 15.705 34.944 1.00 34.81 C
ATOM 10 O3' G B 7 -3.589 15.521 35.018 1.00 38.18 O
ATOM 11 C2' G B 7 -1.787 16.864 35.796 1.00 32.84 C
ATOM 12 O2' G B 7 -2.466 16.866 37.028 1.00 31.33 O
ATOM 13 C1' G B 7 -0.337 16.517 36.038 1.00 32.47 C
ATOM 14 N9 G B 7 0.602 17.083 35.075 1.00 28.81 N
ATOM 15 C8 G B 7 1.197 16.437 34.016 1.00 27.17 C
ATOM 16 N7 G B 7 2.056 17.180 33.374 1.00 26.32 N
ATOM 17 C5 G B 7 2.037 18.394 34.071 1.00 25.49 C
ATOM 18 C6 G B 7 2.781 19.593 33.854 1.00 25.20 C
ATOM 19 O6 G B 7 3.627 19.826 32.959 1.00 27.14 O
ATOM 20 N1 G B 7 2.455 20.584 34.788 1.00 19.70 N
ATOM 21 C2 G B 7 1.531 20.432 35.798 1.00 21.16 C
ATOM 22 N2 G B 7 1.335 21.489 36.595 1.00 21.21 N
ATOM 23 N3 G B 7 0.856 19.306 36.028 1.00 25.50 N
ATOM 24 C4 G B 7 1.152 18.339 35.119 1.00 25.29 C
ATOM 25 P G B 8 -4.527 16.084 33.863 1.00 35.37 P
ATOM 26 OP1 G B 8 -5.823 15.403 34.005 1.00 39.98 O
ATOM 27 OP2 G B 8 -3.788 16.037 32.587 1.00 33.76 O
ATOM 28 O5' G B 8 -4.698 17.597 34.255 1.00 33.16 O
TER
ATOM 2 P G A 3 11.228 17.753 24.391 1.00 37.30 P
ATOM 3 OP1 G A 3 11.628 16.893 23.263 1.00 37.32 O
ATOM 4 OP2 G A 3 10.970 19.201 24.173 1.00 38.07 O
ATOM 5 O5' G A 3 9.937 17.109 25.076 1.00 30.35 O
ATOM 6 C5' G A 3 9.569 15.828 24.697 1.00 26.91 C
ATOM 7 C4' G A 3 8.436 15.315 25.538 1.00 25.36 C
ATOM 8 O4' G A 3 8.644 15.662 26.913 1.00 26.68 O
ATOM 9 C3' G A 3 7.101 15.919 25.243 1.00 24.52 C
ATOM 10 O3' G A 3 6.584 15.364 24.082 1.00 29.02 O
ATOM 11 C2' G A 3 6.335 15.466 26.472 1.00 24.13 C
ATOM 12 O2' G A 3 6.067 14.093 26.452 1.00 24.41 O
ATOM 13 C1' G A 3 7.366 15.739 27.549 1.00 24.76 C
ATOM 14 N9 G A 3 7.236 17.047 28.214 1.00 19.53 N
ATOM 15 C8 G A 3 8.024 18.158 28.021 1.00 15.71 C
ATOM 16 N7 G A 3 7.717 19.149 28.814 1.00 17.66 N
ATOM 17 C5 G A 3 6.663 18.651 29.584 1.00 16.71 C
ATOM 18 C6 G A 3 5.920 19.269 30.618 1.00 15.57 C
ATOM 19 O6 G A 3 6.071 20.392 31.080 1.00 21.78 O
ATOM 20 N1 G A 3 4.937 18.444 31.128 1.00 15.71 N
ATOM 21 C2 G A 3 4.706 17.146 30.709 1.00 18.24 C
ATOM 22 N2 G A 3 3.708 16.477 31.330 1.00 14.95 N
ATOM 23 N3 G A 3 5.400 16.550 29.742 1.00 17.09 N
ATOM 24 C4 G A 3 6.359 17.367 29.225 1.00 15.85 C
ATOM 25 P G A 4 5.633 16.214 23.111 1.00 26.82 P
ATOM 26 OP1 G A 4 5.854 15.728 21.732 1.00 30.53 O
ATOM 27 OP2 G A 4 5.795 17.653 23.416 1.00 30.72 O
ATOM 28 O5' G A 4 4.200 15.763 23.591 1.00 26.97 O
TER
ATOM 1 O3' G B 6 0.694 11.717 33.202 1.00 42.70 O
ATOM 2 P G B 7 -0.443 12.617 32.491 1.00 39.50 P
ATOM 3 OP1 G B 7 -1.649 11.774 32.357 1.00 41.47 O
ATOM 4 OP2 G B 7 0.163 13.272 31.290 1.00 36.20 O
ATOM 5 O5' G B 7 -0.744 13.727 33.571 1.00 36.38 O
ATOM 6 C5' G B 7 -1.321 13.348 34.785 1.00 34.97 C
ATOM 7 C4' G B 7 -1.520 14.561 35.646 1.00 36.43 C
ATOM 8 O4' G B 7 -0.239 15.105 36.000 1.00 34.42 O
ATOM 9 C3' G B 7 -2.213 15.705 34.944 1.00 34.81 C
ATOM 10 O3' G B 7 -3.589 15.521 35.018 1.00 38.18 O
ATOM 11 C2' G B 7 -1.787 16.864 35.796 1.00 32.84 C
ATOM 12 O2' G B 7 -2.466 16.866 37.028 1.00 31.33 O
ATOM 13 C1' G B 7 -0.337 16.517 36.038 1.00 32.47 C
ATOM 14 N9 G B 7 0.602 17.083 35.075 1.00 28.81 N
ATOM 15 C8 G B 7 1.197 16.437 34.016 1.00 27.17 C
ATOM 16 N7 G B 7 2.056 17.180 33.374 1.00 26.32 N
ATOM 17 C5 G B 7 2.037 18.394 34.071 1.00 25.49 C
ATOM 18 C6 G B 7 2.781 19.593 33.854 1.00 25.20 C
ATOM 19 O6 G B 7 3.627 19.826 32.959 1.00 27.14 O
ATOM 20 N1 G B 7 2.455 20.584 34.788 1.00 19.70 N
ATOM 21 C2 G B 7 1.531 20.432 35.798 1.00 21.16 C
ATOM 22 N2 G B 7 1.335 21.489 36.595 1.00 21.21 N
ATOM 23 N3 G B 7 0.856 19.306 36.028 1.00 25.50 N
ATOM 24 C4 G B 7 1.152 18.339 35.119 1.00 25.29 C
ATOM 25 P G B 8 -4.527 16.084 33.863 1.00 35.37 P
ATOM 26 OP1 G B 8 -5.823 15.403 34.005 1.00 39.98 O
ATOM 27 OP2 G B 8 -3.788 16.037 32.587 1.00 33.76 O
ATOM 28 O5' G B 8 -4.698 17.597 34.255 1.00 33.16 O
TER
Atoms:
OP1: (11.628,16.893,23.263)
OP2: (10.970,19.201,24.173)
C3': (7.101,15.919,25.243)
C1': (7.366,15.739,27.549)
C5': (9.569,15.828,24.697)
O6: (6.071,20.392,31.080)
O4': (8.644,15.662,26.913)
C8: (8.024,18.158,28.021)
C2: (4.706,17.146,30.709)
C6: (5.920,19.269,30.618)
C5: (6.663,18.651,29.584)
C4: (6.359,17.367,29.225)
P: (11.228,17.753,24.391)
C4': (8.436,15.315,25.538)
C2': (6.335,15.466,26.472)
O2': (6.067,14.093,26.452)
N1: (4.937,18.444,31.128)
N2: (3.708,16.477,31.330)
N3: (5.400,16.550,29.742)
N7: (7.717,19.149,28.814)
N9: (7.236,17.047,28.214)
O5': (9.937,17.109,25.076)
O3': (6.584,15.364,24.082)
OP2: (10.970,19.201,24.173)
C3': (7.101,15.919,25.243)
C1': (7.366,15.739,27.549)
C5': (9.569,15.828,24.697)
O6: (6.071,20.392,31.080)
O4': (8.644,15.662,26.913)
C8: (8.024,18.158,28.021)
C2: (4.706,17.146,30.709)
C6: (5.920,19.269,30.618)
C5: (6.663,18.651,29.584)
C4: (6.359,17.367,29.225)
P: (11.228,17.753,24.391)
C4': (8.436,15.315,25.538)
C2': (6.335,15.466,26.472)
O2': (6.067,14.093,26.452)
N1: (4.937,18.444,31.128)
N2: (3.708,16.477,31.330)
N3: (5.400,16.550,29.742)
N7: (7.717,19.149,28.814)
N9: (7.236,17.047,28.214)
O5': (9.937,17.109,25.076)
O3': (6.584,15.364,24.082)
OP1: (-1.649,11.774,32.357)
OP2: (0.163,13.272,31.290)
C3': (-2.213,15.705,34.944)
C1': (-0.337,16.517,36.038)
C5': (-1.321,13.348,34.785)
O6: (3.627,19.826,32.959)
O4': (-0.239,15.105,36.000)
C8: (1.197,16.437,34.016)
C2: (1.531,20.432,35.798)
C6: (2.781,19.593,33.854)
C5: (2.037,18.394,34.071)
C4: (1.152,18.339,35.119)
P: (-0.443,12.617,32.491)
C4': (-1.520,14.561,35.646)
C2': (-1.787,16.864,35.796)
O2': (-2.466,16.866,37.028)
N1: (2.455,20.584,34.788)
N2: (1.335,21.489,36.595)
N3: (0.856,19.306,36.028)
N7: (2.056,17.180,33.374)
N9: (0.602,17.083,35.075)
O5': (-0.744,13.727,33.571)
O3': (-3.589,15.521,35.018)
OP2: (0.163,13.272,31.290)
C3': (-2.213,15.705,34.944)
C1': (-0.337,16.517,36.038)
C5': (-1.321,13.348,34.785)
O6: (3.627,19.826,32.959)
O4': (-0.239,15.105,36.000)
C8: (1.197,16.437,34.016)
C2: (1.531,20.432,35.798)
C6: (2.781,19.593,33.854)
C5: (2.037,18.394,34.071)
C4: (1.152,18.339,35.119)
P: (-0.443,12.617,32.491)
C4': (-1.520,14.561,35.646)
C2': (-1.787,16.864,35.796)
O2': (-2.466,16.866,37.028)
N1: (2.455,20.584,34.788)
N2: (1.335,21.489,36.595)
N3: (0.856,19.306,36.028)
N7: (2.056,17.180,33.374)
N9: (0.602,17.083,35.075)
O5': (-0.744,13.727,33.571)
O3': (-3.589,15.521,35.018)
Image (generated by PyMOL):