Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A232:A235
Extra
PDB:
ATOM 1 O3' A A 231 38.233 -5.678 35.446 1.00 89.17 O
ATOM 2 P G A 232 37.680 -6.175 36.889 1.00 96.89 P
ATOM 3 OP1 G A 232 38.868 -6.720 37.600 1.00 98.24 O
ATOM 4 OP2 G A 232 36.479 -7.042 36.718 1.00 83.83 O
ATOM 5 O5' G A 232 37.228 -4.836 37.640 1.00 90.91 O
ATOM 6 C5' G A 232 37.081 -4.794 39.064 1.00 89.77 C
ATOM 7 C4' G A 232 36.788 -3.375 39.537 1.00 82.27 C
ATOM 8 O4' G A 232 35.431 -2.996 39.165 1.00 80.86 O
ATOM 9 C3' G A 232 36.896 -3.174 41.053 1.00 79.47 C
ATOM 10 O3' G A 232 37.455 -1.905 41.387 1.00 70.86 O
ATOM 11 C2' G A 232 35.447 -3.206 41.521 1.00 77.99 C
ATOM 12 O2' G A 232 35.263 -2.422 42.683 1.00 78.18 O
ATOM 13 C1' G A 232 34.697 -2.629 40.318 1.00 76.00 C
ATOM 14 N9 G A 232 33.353 -3.175 40.163 1.00 78.16 N
ATOM 15 C8 G A 232 32.967 -4.476 40.384 1.00 85.32 C
ATOM 16 N7 G A 232 31.703 -4.686 40.138 1.00 83.66 N
ATOM 17 C5 G A 232 31.221 -3.451 39.735 1.00 81.00 C
ATOM 18 C6 G A 232 29.923 -3.068 39.333 1.00 83.83 C
ATOM 19 O6 G A 232 28.907 -3.764 39.255 1.00 87.80 O
ATOM 20 N1 G A 232 29.867 -1.721 39.000 1.00 81.80 N
ATOM 21 C2 G A 232 30.927 -0.850 39.049 1.00 80.91 C
ATOM 22 N2 G A 232 30.665 0.420 38.685 1.00 78.52 N
ATOM 23 N3 G A 232 32.152 -1.197 39.426 1.00 80.56 N
ATOM 24 C4 G A 232 32.226 -2.503 39.751 1.00 79.96 C
ATOM 25 P U A 233 38.884 -1.473 40.791 1.00 72.36 P
ATOM 26 OP1 U A 233 39.715 -2.666 40.504 1.00 77.86 O
ATOM 27 OP2 U A 233 39.400 -0.424 41.708 1.00 73.52 O
ATOM 28 O5' U A 233 38.489 -0.803 39.399 1.00 67.58 O
TER
ATOM 1 O3' U B 234 32.723 6.995 39.777 1.00 60.60 O
ATOM 2 P G B 235 31.575 6.990 40.908 1.00 69.88 P
ATOM 3 OP1 G B 235 31.556 8.297 41.605 1.00 70.85 O
ATOM 4 OP2 G B 235 31.783 5.752 41.700 1.00 70.83 O
ATOM 5 O5' G B 235 30.200 6.916 40.103 1.00 73.17 O
ATOM 6 C5' G B 235 29.505 8.105 39.739 1.00 73.77 C
ATOM 7 C4' G B 235 28.147 7.778 39.184 1.00 69.95 C
ATOM 8 O4' G B 235 28.320 6.860 38.078 1.00 73.67 O
ATOM 9 C3' G B 235 27.140 7.068 40.082 1.00 72.43 C
ATOM 10 O3' G B 235 26.455 7.974 40.945 1.00 72.95 O
ATOM 11 C2' G B 235 26.197 6.469 39.053 1.00 77.63 C
ATOM 12 O2' G B 235 25.348 7.477 38.556 1.00 82.57 O
ATOM 13 C1' G B 235 27.160 6.058 37.937 1.00 76.24 C
ATOM 14 N9 G B 235 27.544 4.649 38.014 1.00 78.88 N
ATOM 15 C8 G B 235 28.732 4.161 38.488 1.00 78.79 C
ATOM 16 N7 G B 235 28.799 2.857 38.466 1.00 81.19 N
ATOM 17 C5 G B 235 27.583 2.451 37.939 1.00 81.84 C
ATOM 18 C6 G B 235 27.088 1.139 37.672 1.00 85.76 C
ATOM 19 O6 G B 235 27.653 0.046 37.858 1.00 87.13 O
ATOM 20 N1 G B 235 25.805 1.177 37.134 1.00 85.07 N
ATOM 21 C2 G B 235 25.093 2.319 36.880 1.00 86.93 C
ATOM 22 N2 G B 235 23.879 2.134 36.354 1.00 87.84 N
ATOM 23 N3 G B 235 25.543 3.550 37.120 1.00 89.05 N
ATOM 24 C4 G B 235 26.790 3.541 37.648 1.00 82.64 C
ATOM 25 P G B 236 25.832 7.444 42.337 1.00 79.23 P
ATOM 26 OP1 G B 236 25.594 8.630 43.200 1.00 71.37 O
ATOM 27 OP2 G B 236 26.656 6.321 42.852 1.00 72.01 O
ATOM 28 O5' G B 236 24.423 6.819 41.939 1.00 76.57 O
TER
ATOM 2 P G A 232 37.680 -6.175 36.889 1.00 96.89 P
ATOM 3 OP1 G A 232 38.868 -6.720 37.600 1.00 98.24 O
ATOM 4 OP2 G A 232 36.479 -7.042 36.718 1.00 83.83 O
ATOM 5 O5' G A 232 37.228 -4.836 37.640 1.00 90.91 O
ATOM 6 C5' G A 232 37.081 -4.794 39.064 1.00 89.77 C
ATOM 7 C4' G A 232 36.788 -3.375 39.537 1.00 82.27 C
ATOM 8 O4' G A 232 35.431 -2.996 39.165 1.00 80.86 O
ATOM 9 C3' G A 232 36.896 -3.174 41.053 1.00 79.47 C
ATOM 10 O3' G A 232 37.455 -1.905 41.387 1.00 70.86 O
ATOM 11 C2' G A 232 35.447 -3.206 41.521 1.00 77.99 C
ATOM 12 O2' G A 232 35.263 -2.422 42.683 1.00 78.18 O
ATOM 13 C1' G A 232 34.697 -2.629 40.318 1.00 76.00 C
ATOM 14 N9 G A 232 33.353 -3.175 40.163 1.00 78.16 N
ATOM 15 C8 G A 232 32.967 -4.476 40.384 1.00 85.32 C
ATOM 16 N7 G A 232 31.703 -4.686 40.138 1.00 83.66 N
ATOM 17 C5 G A 232 31.221 -3.451 39.735 1.00 81.00 C
ATOM 18 C6 G A 232 29.923 -3.068 39.333 1.00 83.83 C
ATOM 19 O6 G A 232 28.907 -3.764 39.255 1.00 87.80 O
ATOM 20 N1 G A 232 29.867 -1.721 39.000 1.00 81.80 N
ATOM 21 C2 G A 232 30.927 -0.850 39.049 1.00 80.91 C
ATOM 22 N2 G A 232 30.665 0.420 38.685 1.00 78.52 N
ATOM 23 N3 G A 232 32.152 -1.197 39.426 1.00 80.56 N
ATOM 24 C4 G A 232 32.226 -2.503 39.751 1.00 79.96 C
ATOM 25 P U A 233 38.884 -1.473 40.791 1.00 72.36 P
ATOM 26 OP1 U A 233 39.715 -2.666 40.504 1.00 77.86 O
ATOM 27 OP2 U A 233 39.400 -0.424 41.708 1.00 73.52 O
ATOM 28 O5' U A 233 38.489 -0.803 39.399 1.00 67.58 O
TER
ATOM 1 O3' U B 234 32.723 6.995 39.777 1.00 60.60 O
ATOM 2 P G B 235 31.575 6.990 40.908 1.00 69.88 P
ATOM 3 OP1 G B 235 31.556 8.297 41.605 1.00 70.85 O
ATOM 4 OP2 G B 235 31.783 5.752 41.700 1.00 70.83 O
ATOM 5 O5' G B 235 30.200 6.916 40.103 1.00 73.17 O
ATOM 6 C5' G B 235 29.505 8.105 39.739 1.00 73.77 C
ATOM 7 C4' G B 235 28.147 7.778 39.184 1.00 69.95 C
ATOM 8 O4' G B 235 28.320 6.860 38.078 1.00 73.67 O
ATOM 9 C3' G B 235 27.140 7.068 40.082 1.00 72.43 C
ATOM 10 O3' G B 235 26.455 7.974 40.945 1.00 72.95 O
ATOM 11 C2' G B 235 26.197 6.469 39.053 1.00 77.63 C
ATOM 12 O2' G B 235 25.348 7.477 38.556 1.00 82.57 O
ATOM 13 C1' G B 235 27.160 6.058 37.937 1.00 76.24 C
ATOM 14 N9 G B 235 27.544 4.649 38.014 1.00 78.88 N
ATOM 15 C8 G B 235 28.732 4.161 38.488 1.00 78.79 C
ATOM 16 N7 G B 235 28.799 2.857 38.466 1.00 81.19 N
ATOM 17 C5 G B 235 27.583 2.451 37.939 1.00 81.84 C
ATOM 18 C6 G B 235 27.088 1.139 37.672 1.00 85.76 C
ATOM 19 O6 G B 235 27.653 0.046 37.858 1.00 87.13 O
ATOM 20 N1 G B 235 25.805 1.177 37.134 1.00 85.07 N
ATOM 21 C2 G B 235 25.093 2.319 36.880 1.00 86.93 C
ATOM 22 N2 G B 235 23.879 2.134 36.354 1.00 87.84 N
ATOM 23 N3 G B 235 25.543 3.550 37.120 1.00 89.05 N
ATOM 24 C4 G B 235 26.790 3.541 37.648 1.00 82.64 C
ATOM 25 P G B 236 25.832 7.444 42.337 1.00 79.23 P
ATOM 26 OP1 G B 236 25.594 8.630 43.200 1.00 71.37 O
ATOM 27 OP2 G B 236 26.656 6.321 42.852 1.00 72.01 O
ATOM 28 O5' G B 236 24.423 6.819 41.939 1.00 76.57 O
TER
Atoms:
OP1: (38.868,-6.720,37.600)
OP2: (36.479,-7.042,36.718)
C3': (36.896,-3.174,41.053)
C1': (34.697,-2.629,40.318)
C5': (37.081,-4.794,39.064)
O6: (28.907,-3.764,39.255)
O4': (35.431,-2.996,39.165)
C8: (32.967,-4.476,40.384)
C2: (30.927,-0.850,39.049)
C6: (29.923,-3.068,39.333)
C5: (31.221,-3.451,39.735)
C4: (32.226,-2.503,39.751)
P: (37.680,-6.175,36.889)
C4': (36.788,-3.375,39.537)
C2': (35.447,-3.206,41.521)
O2': (35.263,-2.422,42.683)
N1: (29.867,-1.721,39.000)
N2: (30.665,0.420,38.685)
N3: (32.152,-1.197,39.426)
N7: (31.703,-4.686,40.138)
N9: (33.353,-3.175,40.163)
O5': (37.228,-4.836,37.640)
O3': (37.455,-1.905,41.387)
OP2: (36.479,-7.042,36.718)
C3': (36.896,-3.174,41.053)
C1': (34.697,-2.629,40.318)
C5': (37.081,-4.794,39.064)
O6: (28.907,-3.764,39.255)
O4': (35.431,-2.996,39.165)
C8: (32.967,-4.476,40.384)
C2: (30.927,-0.850,39.049)
C6: (29.923,-3.068,39.333)
C5: (31.221,-3.451,39.735)
C4: (32.226,-2.503,39.751)
P: (37.680,-6.175,36.889)
C4': (36.788,-3.375,39.537)
C2': (35.447,-3.206,41.521)
O2': (35.263,-2.422,42.683)
N1: (29.867,-1.721,39.000)
N2: (30.665,0.420,38.685)
N3: (32.152,-1.197,39.426)
N7: (31.703,-4.686,40.138)
N9: (33.353,-3.175,40.163)
O5': (37.228,-4.836,37.640)
O3': (37.455,-1.905,41.387)
OP1: (31.556,8.297,41.605)
OP2: (31.783,5.752,41.700)
C3': (27.140,7.068,40.082)
C1': (27.160,6.058,37.937)
C5': (29.505,8.105,39.739)
O6: (27.653,0.046,37.858)
O4': (28.320,6.860,38.078)
C8: (28.732,4.161,38.488)
C2: (25.093,2.319,36.880)
C6: (27.088,1.139,37.672)
C5: (27.583,2.451,37.939)
C4: (26.790,3.541,37.648)
P: (31.575,6.990,40.908)
C4': (28.147,7.778,39.184)
C2': (26.197,6.469,39.053)
O2': (25.348,7.477,38.556)
N1: (25.805,1.177,37.134)
N2: (23.879,2.134,36.354)
N3: (25.543,3.550,37.120)
N7: (28.799,2.857,38.466)
N9: (27.544,4.649,38.014)
O5': (30.200,6.916,40.103)
O3': (26.455,7.974,40.945)
OP2: (31.783,5.752,41.700)
C3': (27.140,7.068,40.082)
C1': (27.160,6.058,37.937)
C5': (29.505,8.105,39.739)
O6: (27.653,0.046,37.858)
O4': (28.320,6.860,38.078)
C8: (28.732,4.161,38.488)
C2: (25.093,2.319,36.880)
C6: (27.088,1.139,37.672)
C5: (27.583,2.451,37.939)
C4: (26.790,3.541,37.648)
P: (31.575,6.990,40.908)
C4': (28.147,7.778,39.184)
C2': (26.197,6.469,39.053)
O2': (25.348,7.477,38.556)
N1: (25.805,1.177,37.134)
N2: (23.879,2.134,36.354)
N3: (25.543,3.550,37.120)
N7: (28.799,2.857,38.466)
N9: (27.544,4.649,38.014)
O5': (30.200,6.916,40.103)
O3': (26.455,7.974,40.945)
Image (generated by PyMOL):