Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A59:A63
Extra
PDB:
ATOM 1 O3' C A 58 45.576 -5.419 97.581 1.00 95.30 O
ATOM 2 P G A 59 45.827 -6.341 98.877 1.00105.12 P
ATOM 3 OP1 G A 59 45.501 -5.555 100.099 1.00105.50 O
ATOM 4 OP2 G A 59 47.179 -6.958 98.752 1.00 91.08 O
ATOM 5 O5' G A 59 44.761 -7.512 98.680 1.00102.50 O
ATOM 6 C5' G A 59 43.381 -7.347 99.031 1.00104.85 C
ATOM 7 C4' G A 59 42.947 -8.507 99.886 1.00106.17 C
ATOM 8 O4' G A 59 43.013 -9.702 99.072 1.00106.30 O
ATOM 9 C3' G A 59 43.923 -8.740 101.034 1.00106.16 C
ATOM 10 O3' G A 59 43.670 -8.048 102.277 1.00100.44 O
ATOM 11 C2' G A 59 43.899 -10.253 101.229 1.00108.01 C
ATOM 12 O2' G A 59 42.917 -10.670 102.154 1.00112.95 O
ATOM 13 C1' G A 59 43.572 -10.763 99.819 1.00108.11 C
ATOM 14 N9 G A 59 44.662 -11.342 99.039 1.00111.23 N
ATOM 15 C8 G A 59 45.945 -10.863 98.894 1.00110.79 C
ATOM 16 N7 G A 59 46.661 -11.570 98.058 1.00118.20 N
ATOM 17 C5 G A 59 45.804 -12.581 97.635 1.00115.78 C
ATOM 18 C6 G A 59 46.006 -13.639 96.700 1.00117.32 C
ATOM 19 O6 G A 59 47.015 -13.889 96.009 1.00114.97 O
ATOM 20 N1 G A 59 44.870 -14.441 96.590 1.00112.57 N
ATOM 21 C2 G A 59 43.693 -14.244 97.273 1.00105.55 C
ATOM 22 N2 G A 59 42.711 -15.121 97.034 1.00106.70 N
ATOM 23 N3 G A 59 43.488 -13.260 98.123 1.00103.70 N
ATOM 24 C4 G A 59 44.576 -12.470 98.254 1.00109.34 C
ATOM 25 P U A 60 42.223 -7.398 102.632 1.00 98.99 P
ATOM 26 OP1 U A 60 42.476 -6.044 103.187 1.00109.69 O
ATOM 27 OP2 U A 60 41.466 -8.393 103.436 1.00 96.36 O
ATOM 28 O5' U A 60 41.405 -7.145 101.288 1.00 99.63 O
TER
ATOM 1 O3' C B 62 35.212 -16.027 98.514 1.00115.69 O
ATOM 2 P G B 63 35.988 -16.829 99.676 1.00119.40 P
ATOM 3 OP1 G B 63 35.010 -17.119 100.756 1.00104.30 O
ATOM 4 OP2 G B 63 37.239 -16.078 99.996 1.00114.15 O
ATOM 5 O5' G B 63 36.395 -18.204 98.973 1.00117.57 O
ATOM 6 C5' G B 63 35.398 -19.075 98.428 1.00119.72 C
ATOM 7 C4' G B 63 36.039 -20.224 97.672 1.00122.39 C
ATOM 8 O4' G B 63 36.736 -19.715 96.501 1.00122.54 O
ATOM 9 C3' G B 63 37.104 -21.013 98.418 1.00121.93 C
ATOM 10 O3' G B 63 36.586 -21.993 99.304 1.00122.58 O
ATOM 11 C2' G B 63 37.923 -21.618 97.284 1.00121.72 C
ATOM 12 O2' G B 63 37.331 -22.778 96.733 1.00119.81 O
ATOM 13 C1' G B 63 37.907 -20.484 96.261 1.00120.84 C
ATOM 14 N9 G B 63 39.075 -19.626 96.451 1.00116.10 N
ATOM 15 C8 G B 63 39.113 -18.416 97.103 1.00115.73 C
ATOM 16 N7 G B 63 40.308 -17.898 97.151 1.00113.54 N
ATOM 17 C5 G B 63 41.109 -18.811 96.485 1.00110.89 C
ATOM 18 C6 G B 63 42.495 -18.787 96.225 1.00112.08 C
ATOM 19 O6 G B 63 43.320 -17.941 96.552 1.00116.55 O
ATOM 20 N1 G B 63 42.904 -19.902 95.513 1.00116.01 N
ATOM 21 C2 G B 63 42.088 -20.923 95.113 1.00118.04 C
ATOM 22 N2 G B 63 42.687 -21.923 94.444 1.00115.73 N
ATOM 23 N3 G B 63 40.786 -20.966 95.355 1.00118.97 N
ATOM 24 C4 G B 63 40.367 -19.881 96.039 1.00115.25 C
ATOM 25 P G B 64 37.556 -22.623 100.420 1.00124.15 P
ATOM 26 OP1 G B 64 36.838 -23.721 101.117 1.00126.04 O
ATOM 27 OP2 G B 64 38.145 -21.509 101.209 1.00125.44 O
ATOM 28 O5' G B 64 38.721 -23.255 99.539 1.00124.69 O
TER
ATOM 2 P G A 59 45.827 -6.341 98.877 1.00105.12 P
ATOM 3 OP1 G A 59 45.501 -5.555 100.099 1.00105.50 O
ATOM 4 OP2 G A 59 47.179 -6.958 98.752 1.00 91.08 O
ATOM 5 O5' G A 59 44.761 -7.512 98.680 1.00102.50 O
ATOM 6 C5' G A 59 43.381 -7.347 99.031 1.00104.85 C
ATOM 7 C4' G A 59 42.947 -8.507 99.886 1.00106.17 C
ATOM 8 O4' G A 59 43.013 -9.702 99.072 1.00106.30 O
ATOM 9 C3' G A 59 43.923 -8.740 101.034 1.00106.16 C
ATOM 10 O3' G A 59 43.670 -8.048 102.277 1.00100.44 O
ATOM 11 C2' G A 59 43.899 -10.253 101.229 1.00108.01 C
ATOM 12 O2' G A 59 42.917 -10.670 102.154 1.00112.95 O
ATOM 13 C1' G A 59 43.572 -10.763 99.819 1.00108.11 C
ATOM 14 N9 G A 59 44.662 -11.342 99.039 1.00111.23 N
ATOM 15 C8 G A 59 45.945 -10.863 98.894 1.00110.79 C
ATOM 16 N7 G A 59 46.661 -11.570 98.058 1.00118.20 N
ATOM 17 C5 G A 59 45.804 -12.581 97.635 1.00115.78 C
ATOM 18 C6 G A 59 46.006 -13.639 96.700 1.00117.32 C
ATOM 19 O6 G A 59 47.015 -13.889 96.009 1.00114.97 O
ATOM 20 N1 G A 59 44.870 -14.441 96.590 1.00112.57 N
ATOM 21 C2 G A 59 43.693 -14.244 97.273 1.00105.55 C
ATOM 22 N2 G A 59 42.711 -15.121 97.034 1.00106.70 N
ATOM 23 N3 G A 59 43.488 -13.260 98.123 1.00103.70 N
ATOM 24 C4 G A 59 44.576 -12.470 98.254 1.00109.34 C
ATOM 25 P U A 60 42.223 -7.398 102.632 1.00 98.99 P
ATOM 26 OP1 U A 60 42.476 -6.044 103.187 1.00109.69 O
ATOM 27 OP2 U A 60 41.466 -8.393 103.436 1.00 96.36 O
ATOM 28 O5' U A 60 41.405 -7.145 101.288 1.00 99.63 O
TER
ATOM 1 O3' C B 62 35.212 -16.027 98.514 1.00115.69 O
ATOM 2 P G B 63 35.988 -16.829 99.676 1.00119.40 P
ATOM 3 OP1 G B 63 35.010 -17.119 100.756 1.00104.30 O
ATOM 4 OP2 G B 63 37.239 -16.078 99.996 1.00114.15 O
ATOM 5 O5' G B 63 36.395 -18.204 98.973 1.00117.57 O
ATOM 6 C5' G B 63 35.398 -19.075 98.428 1.00119.72 C
ATOM 7 C4' G B 63 36.039 -20.224 97.672 1.00122.39 C
ATOM 8 O4' G B 63 36.736 -19.715 96.501 1.00122.54 O
ATOM 9 C3' G B 63 37.104 -21.013 98.418 1.00121.93 C
ATOM 10 O3' G B 63 36.586 -21.993 99.304 1.00122.58 O
ATOM 11 C2' G B 63 37.923 -21.618 97.284 1.00121.72 C
ATOM 12 O2' G B 63 37.331 -22.778 96.733 1.00119.81 O
ATOM 13 C1' G B 63 37.907 -20.484 96.261 1.00120.84 C
ATOM 14 N9 G B 63 39.075 -19.626 96.451 1.00116.10 N
ATOM 15 C8 G B 63 39.113 -18.416 97.103 1.00115.73 C
ATOM 16 N7 G B 63 40.308 -17.898 97.151 1.00113.54 N
ATOM 17 C5 G B 63 41.109 -18.811 96.485 1.00110.89 C
ATOM 18 C6 G B 63 42.495 -18.787 96.225 1.00112.08 C
ATOM 19 O6 G B 63 43.320 -17.941 96.552 1.00116.55 O
ATOM 20 N1 G B 63 42.904 -19.902 95.513 1.00116.01 N
ATOM 21 C2 G B 63 42.088 -20.923 95.113 1.00118.04 C
ATOM 22 N2 G B 63 42.687 -21.923 94.444 1.00115.73 N
ATOM 23 N3 G B 63 40.786 -20.966 95.355 1.00118.97 N
ATOM 24 C4 G B 63 40.367 -19.881 96.039 1.00115.25 C
ATOM 25 P G B 64 37.556 -22.623 100.420 1.00124.15 P
ATOM 26 OP1 G B 64 36.838 -23.721 101.117 1.00126.04 O
ATOM 27 OP2 G B 64 38.145 -21.509 101.209 1.00125.44 O
ATOM 28 O5' G B 64 38.721 -23.255 99.539 1.00124.69 O
TER
Atoms:
OP1: (45.501,-5.555,100.099)
OP2: (47.179,-6.958,98.752)
C3': (43.923,-8.740,101.034)
C1': (43.572,-10.763,99.819)
C5': (43.381,-7.347,99.031)
O6: (47.015,-13.889,96.009)
O4': (43.013,-9.702,99.072)
C8: (45.945,-10.863,98.894)
C2: (43.693,-14.244,97.273)
C6: (46.006,-13.639,96.700)
C5: (45.804,-12.581,97.635)
C4: (44.576,-12.470,98.254)
P: (45.827,-6.341,98.877)
C4': (42.947,-8.507,99.886)
C2': (43.899,-10.253,101.229)
O2': (42.917,-10.670,102.154)
N1: (44.870,-14.441,96.590)
N2: (42.711,-15.121,97.034)
N3: (43.488,-13.260,98.123)
N7: (46.661,-11.570,98.058)
N9: (44.662,-11.342,99.039)
O5': (44.761,-7.512,98.680)
O3': (43.670,-8.048,102.277)
OP2: (47.179,-6.958,98.752)
C3': (43.923,-8.740,101.034)
C1': (43.572,-10.763,99.819)
C5': (43.381,-7.347,99.031)
O6: (47.015,-13.889,96.009)
O4': (43.013,-9.702,99.072)
C8: (45.945,-10.863,98.894)
C2: (43.693,-14.244,97.273)
C6: (46.006,-13.639,96.700)
C5: (45.804,-12.581,97.635)
C4: (44.576,-12.470,98.254)
P: (45.827,-6.341,98.877)
C4': (42.947,-8.507,99.886)
C2': (43.899,-10.253,101.229)
O2': (42.917,-10.670,102.154)
N1: (44.870,-14.441,96.590)
N2: (42.711,-15.121,97.034)
N3: (43.488,-13.260,98.123)
N7: (46.661,-11.570,98.058)
N9: (44.662,-11.342,99.039)
O5': (44.761,-7.512,98.680)
O3': (43.670,-8.048,102.277)
OP1: (35.010,-17.119,100.756)
OP2: (37.239,-16.078,99.996)
C3': (37.104,-21.013,98.418)
C1': (37.907,-20.484,96.261)
C5': (35.398,-19.075,98.428)
O6: (43.320,-17.941,96.552)
O4': (36.736,-19.715,96.501)
C8: (39.113,-18.416,97.103)
C2: (42.088,-20.923,95.113)
C6: (42.495,-18.787,96.225)
C5: (41.109,-18.811,96.485)
C4: (40.367,-19.881,96.039)
P: (35.988,-16.829,99.676)
C4': (36.039,-20.224,97.672)
C2': (37.923,-21.618,97.284)
O2': (37.331,-22.778,96.733)
N1: (42.904,-19.902,95.513)
N2: (42.687,-21.923,94.444)
N3: (40.786,-20.966,95.355)
N7: (40.308,-17.898,97.151)
N9: (39.075,-19.626,96.451)
O5': (36.395,-18.204,98.973)
O3': (36.586,-21.993,99.304)
OP2: (37.239,-16.078,99.996)
C3': (37.104,-21.013,98.418)
C1': (37.907,-20.484,96.261)
C5': (35.398,-19.075,98.428)
O6: (43.320,-17.941,96.552)
O4': (36.736,-19.715,96.501)
C8: (39.113,-18.416,97.103)
C2: (42.088,-20.923,95.113)
C6: (42.495,-18.787,96.225)
C5: (41.109,-18.811,96.485)
C4: (40.367,-19.881,96.039)
P: (35.988,-16.829,99.676)
C4': (36.039,-20.224,97.672)
C2': (37.923,-21.618,97.284)
O2': (37.331,-22.778,96.733)
N1: (42.904,-19.902,95.513)
N2: (42.687,-21.923,94.444)
N3: (40.786,-20.966,95.355)
N7: (40.308,-17.898,97.151)
N9: (39.075,-19.626,96.451)
O5': (36.395,-18.204,98.973)
O3': (36.586,-21.993,99.304)
Image (generated by PyMOL):