Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3MIJ:A3:A9
Extra
PDB:
ATOM 1 O3' G A 2 21.164 -18.499 -3.575 1.00 16.56 O
ATOM 2 P G A 3 19.591 -18.728 -3.757 1.00 19.23 P
ATOM 3 OP1 G A 3 19.019 -17.471 -4.281 1.00 19.27 O
ATOM 4 OP2 G A 3 19.035 -19.314 -2.510 1.00 17.43 O
ATOM 5 O5' G A 3 19.529 -19.836 -4.897 1.00 19.42 O
ATOM 6 C5' G A 3 20.131 -19.594 -6.147 1.00 19.67 C
ATOM 7 C4' G A 3 20.182 -20.869 -6.960 1.00 19.48 C
ATOM 8 O4' G A 3 21.081 -21.802 -6.332 1.00 20.10 O
ATOM 9 C3' G A 3 18.885 -21.633 -7.042 1.00 18.85 C
ATOM 10 O3' G A 3 18.107 -21.107 -8.060 1.00 18.90 O
ATOM 11 C2' G A 3 19.400 -23.018 -7.400 1.00 19.36 C
ATOM 12 O2' G A 3 19.842 -23.101 -8.737 1.00 20.00 O
ATOM 13 C1' G A 3 20.595 -23.121 -6.492 1.00 18.71 C
ATOM 14 N9 G A 3 20.304 -23.661 -5.175 1.00 18.83 N
ATOM 15 C8 G A 3 20.158 -22.947 -4.010 1.00 19.60 C
ATOM 16 N7 G A 3 19.921 -23.694 -2.966 1.00 19.31 N
ATOM 17 C5 G A 3 19.919 -24.979 -3.473 1.00 18.49 C
ATOM 18 C6 G A 3 19.722 -26.193 -2.811 1.00 19.02 C
ATOM 19 O6 G A 3 19.515 -26.379 -1.598 1.00 20.70 O
ATOM 20 N1 G A 3 19.786 -27.279 -3.672 1.00 18.35 N
ATOM 21 C2 G A 3 20.032 -27.194 -5.017 1.00 17.86 C
ATOM 22 N2 G A 3 20.072 -28.350 -5.686 1.00 16.52 N
ATOM 23 N3 G A 3 20.227 -26.052 -5.659 1.00 18.61 N
ATOM 24 C4 G A 3 20.152 -24.984 -4.824 1.00 18.51 C
ATOM 25 P G A 4 16.558 -21.451 -8.131 1.00 19.53 P
ATOM 26 OP1 G A 4 16.004 -20.796 -9.328 1.00 20.75 O
ATOM 27 OP2 G A 4 15.956 -21.185 -6.803 1.00 18.72 O
ATOM 28 O5' G A 4 16.569 -23.017 -8.381 1.00 19.43 O
TER
ATOM 1 O3' G B 8 20.925 -31.842 -9.886 1.00 17.60 O
ATOM 2 P G B 9 19.355 -32.007 -9.668 1.00 18.12 P
ATOM 3 OP1 G B 9 18.799 -32.627 -10.891 1.00 16.20 O
ATOM 4 OP2 G B 9 18.836 -30.722 -9.164 1.00 17.24 O
ATOM 5 O5' G B 9 19.258 -33.056 -8.484 1.00 19.36 O
ATOM 6 C5' G B 9 19.675 -34.404 -8.693 1.00 21.23 C
ATOM 7 C4' G B 9 19.621 -35.189 -7.396 1.00 21.02 C
ATOM 8 O4' G B 9 20.527 -34.608 -6.448 1.00 21.18 O
ATOM 9 C3' G B 9 18.296 -35.141 -6.688 1.00 21.05 C
ATOM 10 O3' G B 9 17.468 -36.106 -7.242 1.00 20.16 O
ATOM 11 C2' G B 9 18.700 -35.491 -5.264 1.00 21.96 C
ATOM 12 O2' G B 9 18.947 -36.881 -5.106 1.00 23.78 O
ATOM 13 C1' G B 9 20.006 -34.737 -5.141 1.00 20.87 C
ATOM 14 N9 G B 9 19.924 -33.409 -4.557 1.00 20.29 N
ATOM 15 C8 G B 9 19.949 -32.214 -5.231 1.00 20.50 C
ATOM 16 N7 G B 9 19.916 -31.174 -4.443 1.00 20.73 N
ATOM 17 C5 G B 9 19.880 -31.719 -3.170 1.00 20.41 C
ATOM 18 C6 G B 9 19.820 -31.084 -1.920 1.00 21.70 C
ATOM 19 O6 G B 9 19.802 -29.859 -1.672 1.00 22.53 O
ATOM 20 N1 G B 9 19.782 -31.990 -0.871 1.00 21.70 N
ATOM 21 C2 G B 9 19.806 -33.348 -1.019 1.00 21.66 C
ATOM 22 N2 G B 9 19.770 -34.063 0.108 1.00 21.54 N
ATOM 23 N3 G B 9 19.860 -33.965 -2.190 1.00 21.59 N
ATOM 24 C4 G B 9 19.893 -33.088 -3.220 1.00 20.45 C
ATOM 25 P G B 10 15.897 -35.926 -7.174 1.00 19.82 P
ATOM 26 OP1 G B 10 15.324 -36.914 -8.120 1.00 19.93 O
ATOM 27 OP2 G B 10 15.549 -34.490 -7.305 1.00 18.89 O
ATOM 28 O5' G B 10 15.584 -36.325 -5.660 1.00 20.00 O
TER
ATOM 2 P G A 3 19.591 -18.728 -3.757 1.00 19.23 P
ATOM 3 OP1 G A 3 19.019 -17.471 -4.281 1.00 19.27 O
ATOM 4 OP2 G A 3 19.035 -19.314 -2.510 1.00 17.43 O
ATOM 5 O5' G A 3 19.529 -19.836 -4.897 1.00 19.42 O
ATOM 6 C5' G A 3 20.131 -19.594 -6.147 1.00 19.67 C
ATOM 7 C4' G A 3 20.182 -20.869 -6.960 1.00 19.48 C
ATOM 8 O4' G A 3 21.081 -21.802 -6.332 1.00 20.10 O
ATOM 9 C3' G A 3 18.885 -21.633 -7.042 1.00 18.85 C
ATOM 10 O3' G A 3 18.107 -21.107 -8.060 1.00 18.90 O
ATOM 11 C2' G A 3 19.400 -23.018 -7.400 1.00 19.36 C
ATOM 12 O2' G A 3 19.842 -23.101 -8.737 1.00 20.00 O
ATOM 13 C1' G A 3 20.595 -23.121 -6.492 1.00 18.71 C
ATOM 14 N9 G A 3 20.304 -23.661 -5.175 1.00 18.83 N
ATOM 15 C8 G A 3 20.158 -22.947 -4.010 1.00 19.60 C
ATOM 16 N7 G A 3 19.921 -23.694 -2.966 1.00 19.31 N
ATOM 17 C5 G A 3 19.919 -24.979 -3.473 1.00 18.49 C
ATOM 18 C6 G A 3 19.722 -26.193 -2.811 1.00 19.02 C
ATOM 19 O6 G A 3 19.515 -26.379 -1.598 1.00 20.70 O
ATOM 20 N1 G A 3 19.786 -27.279 -3.672 1.00 18.35 N
ATOM 21 C2 G A 3 20.032 -27.194 -5.017 1.00 17.86 C
ATOM 22 N2 G A 3 20.072 -28.350 -5.686 1.00 16.52 N
ATOM 23 N3 G A 3 20.227 -26.052 -5.659 1.00 18.61 N
ATOM 24 C4 G A 3 20.152 -24.984 -4.824 1.00 18.51 C
ATOM 25 P G A 4 16.558 -21.451 -8.131 1.00 19.53 P
ATOM 26 OP1 G A 4 16.004 -20.796 -9.328 1.00 20.75 O
ATOM 27 OP2 G A 4 15.956 -21.185 -6.803 1.00 18.72 O
ATOM 28 O5' G A 4 16.569 -23.017 -8.381 1.00 19.43 O
TER
ATOM 1 O3' G B 8 20.925 -31.842 -9.886 1.00 17.60 O
ATOM 2 P G B 9 19.355 -32.007 -9.668 1.00 18.12 P
ATOM 3 OP1 G B 9 18.799 -32.627 -10.891 1.00 16.20 O
ATOM 4 OP2 G B 9 18.836 -30.722 -9.164 1.00 17.24 O
ATOM 5 O5' G B 9 19.258 -33.056 -8.484 1.00 19.36 O
ATOM 6 C5' G B 9 19.675 -34.404 -8.693 1.00 21.23 C
ATOM 7 C4' G B 9 19.621 -35.189 -7.396 1.00 21.02 C
ATOM 8 O4' G B 9 20.527 -34.608 -6.448 1.00 21.18 O
ATOM 9 C3' G B 9 18.296 -35.141 -6.688 1.00 21.05 C
ATOM 10 O3' G B 9 17.468 -36.106 -7.242 1.00 20.16 O
ATOM 11 C2' G B 9 18.700 -35.491 -5.264 1.00 21.96 C
ATOM 12 O2' G B 9 18.947 -36.881 -5.106 1.00 23.78 O
ATOM 13 C1' G B 9 20.006 -34.737 -5.141 1.00 20.87 C
ATOM 14 N9 G B 9 19.924 -33.409 -4.557 1.00 20.29 N
ATOM 15 C8 G B 9 19.949 -32.214 -5.231 1.00 20.50 C
ATOM 16 N7 G B 9 19.916 -31.174 -4.443 1.00 20.73 N
ATOM 17 C5 G B 9 19.880 -31.719 -3.170 1.00 20.41 C
ATOM 18 C6 G B 9 19.820 -31.084 -1.920 1.00 21.70 C
ATOM 19 O6 G B 9 19.802 -29.859 -1.672 1.00 22.53 O
ATOM 20 N1 G B 9 19.782 -31.990 -0.871 1.00 21.70 N
ATOM 21 C2 G B 9 19.806 -33.348 -1.019 1.00 21.66 C
ATOM 22 N2 G B 9 19.770 -34.063 0.108 1.00 21.54 N
ATOM 23 N3 G B 9 19.860 -33.965 -2.190 1.00 21.59 N
ATOM 24 C4 G B 9 19.893 -33.088 -3.220 1.00 20.45 C
ATOM 25 P G B 10 15.897 -35.926 -7.174 1.00 19.82 P
ATOM 26 OP1 G B 10 15.324 -36.914 -8.120 1.00 19.93 O
ATOM 27 OP2 G B 10 15.549 -34.490 -7.305 1.00 18.89 O
ATOM 28 O5' G B 10 15.584 -36.325 -5.660 1.00 20.00 O
TER
Atoms:
OP1: (19.019,-17.471,-4.281)
OP2: (19.035,-19.314,-2.510)
C3': (18.885,-21.633,-7.042)
C1': (20.595,-23.121,-6.492)
C5': (20.131,-19.594,-6.147)
O6: (19.515,-26.379,-1.598)
O4': (21.081,-21.802,-6.332)
C8: (20.158,-22.947,-4.010)
C2: (20.032,-27.194,-5.017)
C6: (19.722,-26.193,-2.811)
C5: (19.919,-24.979,-3.473)
C4: (20.152,-24.984,-4.824)
P: (19.591,-18.728,-3.757)
C4': (20.182,-20.869,-6.960)
C2': (19.400,-23.018,-7.400)
O2': (19.842,-23.101,-8.737)
N1: (19.786,-27.279,-3.672)
N2: (20.072,-28.350,-5.686)
N3: (20.227,-26.052,-5.659)
N7: (19.921,-23.694,-2.966)
N9: (20.304,-23.661,-5.175)
O5': (19.529,-19.836,-4.897)
O3': (18.107,-21.107,-8.060)
OP2: (19.035,-19.314,-2.510)
C3': (18.885,-21.633,-7.042)
C1': (20.595,-23.121,-6.492)
C5': (20.131,-19.594,-6.147)
O6: (19.515,-26.379,-1.598)
O4': (21.081,-21.802,-6.332)
C8: (20.158,-22.947,-4.010)
C2: (20.032,-27.194,-5.017)
C6: (19.722,-26.193,-2.811)
C5: (19.919,-24.979,-3.473)
C4: (20.152,-24.984,-4.824)
P: (19.591,-18.728,-3.757)
C4': (20.182,-20.869,-6.960)
C2': (19.400,-23.018,-7.400)
O2': (19.842,-23.101,-8.737)
N1: (19.786,-27.279,-3.672)
N2: (20.072,-28.350,-5.686)
N3: (20.227,-26.052,-5.659)
N7: (19.921,-23.694,-2.966)
N9: (20.304,-23.661,-5.175)
O5': (19.529,-19.836,-4.897)
O3': (18.107,-21.107,-8.060)
OP1: (18.799,-32.627,-10.891)
OP2: (18.836,-30.722,-9.164)
C3': (18.296,-35.141,-6.688)
C1': (20.006,-34.737,-5.141)
C5': (19.675,-34.404,-8.693)
O6: (19.802,-29.859,-1.672)
O4': (20.527,-34.608,-6.448)
C8: (19.949,-32.214,-5.231)
C2: (19.806,-33.348,-1.019)
C6: (19.820,-31.084,-1.920)
C5: (19.880,-31.719,-3.170)
C4: (19.893,-33.088,-3.220)
P: (19.355,-32.007,-9.668)
C4': (19.621,-35.189,-7.396)
C2': (18.700,-35.491,-5.264)
O2': (18.947,-36.881,-5.106)
N1: (19.782,-31.990,-0.871)
N2: (19.770,-34.063,0.108)
N3: (19.860,-33.965,-2.190)
N7: (19.916,-31.174,-4.443)
N9: (19.924,-33.409,-4.557)
O5': (19.258,-33.056,-8.484)
O3': (17.468,-36.106,-7.242)
OP2: (18.836,-30.722,-9.164)
C3': (18.296,-35.141,-6.688)
C1': (20.006,-34.737,-5.141)
C5': (19.675,-34.404,-8.693)
O6: (19.802,-29.859,-1.672)
O4': (20.527,-34.608,-6.448)
C8: (19.949,-32.214,-5.231)
C2: (19.806,-33.348,-1.019)
C6: (19.820,-31.084,-1.920)
C5: (19.880,-31.719,-3.170)
C4: (19.893,-33.088,-3.220)
P: (19.355,-32.007,-9.668)
C4': (19.621,-35.189,-7.396)
C2': (18.700,-35.491,-5.264)
O2': (18.947,-36.881,-5.106)
N1: (19.782,-31.990,-0.871)
N2: (19.770,-34.063,0.108)
N3: (19.860,-33.965,-2.190)
N7: (19.916,-31.174,-4.443)
N9: (19.924,-33.409,-4.557)
O5': (19.258,-33.056,-8.484)
O3': (17.468,-36.106,-7.242)
Image (generated by PyMOL):