Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A53:A81
Extra
PDB:
ATOM 1 O3' U A 52 20.181 -72.613 -48.769 1.00 43.74 O
ATOM 2 P G A 53 19.573 -73.595 -47.647 1.00 48.00 P
ATOM 3 OP1 G A 53 18.158 -73.847 -48.017 1.00 48.57 O
ATOM 4 OP2 G A 53 19.867 -72.990 -46.332 1.00 50.03 O
ATOM 5 O5' G A 53 20.425 -74.924 -47.843 1.00 36.49 O
ATOM 6 C5' G A 53 20.512 -75.531 -49.125 1.00 38.34 C
ATOM 7 C4' G A 53 20.463 -77.028 -49.038 1.00 38.54 C
ATOM 8 O4' G A 53 21.796 -77.510 -48.764 1.00 39.84 O
ATOM 9 C3' G A 53 19.572 -77.591 -47.930 1.00 44.00 C
ATOM 10 O3' G A 53 19.047 -78.860 -48.325 1.00 42.76 O
ATOM 11 C2' G A 53 20.558 -77.807 -46.800 1.00 45.52 C
ATOM 12 O2' G A 53 20.157 -78.783 -45.867 1.00 48.38 O
ATOM 13 C1' G A 53 21.797 -78.247 -47.564 1.00 45.80 C
ATOM 14 N9 G A 53 23.048 -77.973 -46.871 1.00 53.36 N
ATOM 15 C8 G A 53 23.234 -77.282 -45.710 1.00 54.15 C
ATOM 16 N7 G A 53 24.487 -77.235 -45.363 1.00 55.73 N
ATOM 17 C5 G A 53 25.153 -77.932 -46.351 1.00 57.84 C
ATOM 18 C6 G A 53 26.528 -78.205 -46.512 1.00 57.75 C
ATOM 19 O6 G A 53 27.451 -77.867 -45.767 1.00 56.32 O
ATOM 20 N1 G A 53 26.770 -78.943 -47.665 1.00 49.99 N
ATOM 21 C2 G A 53 25.806 -79.363 -48.544 1.00 47.75 C
ATOM 22 N2 G A 53 26.225 -80.052 -49.604 1.00 50.37 N
ATOM 23 N3 G A 53 24.518 -79.123 -48.404 1.00 47.78 N
ATOM 24 C4 G A 53 24.274 -78.404 -47.289 1.00 55.01 C
ATOM 25 P G A 54 17.552 -78.975 -48.870 1.00 51.23 P
ATOM 26 OP1 G A 54 17.531 -80.079 -49.852 1.00 54.61 O
ATOM 27 OP2 G A 54 17.143 -77.614 -49.309 1.00 45.96 O
ATOM 28 O5' G A 54 16.740 -79.391 -47.584 1.00 47.08 O
TER
ATOM 1 O3' C B 80 25.226 -85.409 -53.097 1.00 50.65 O
ATOM 2 P G B 81 25.815 -85.486 -51.609 1.00 65.28 P
ATOM 3 OP1 G B 81 25.736 -86.895 -51.189 1.00 53.51 O
ATOM 4 OP2 G B 81 25.109 -84.463 -50.811 1.00 55.61 O
ATOM 5 O5' G B 81 27.343 -85.071 -51.810 1.00 51.91 O
ATOM 6 C5' G B 81 28.143 -85.759 -52.760 1.00 53.41 C
ATOM 7 C4' G B 81 29.539 -85.204 -52.839 1.00 46.42 C
ATOM 8 O4' G B 81 29.495 -83.769 -52.980 1.00 44.46 O
ATOM 9 C3' G B 81 30.421 -85.431 -51.622 1.00 45.74 C
ATOM 10 O3' G B 81 30.982 -86.722 -51.592 1.00 56.91 O
ATOM 11 C2' G B 81 31.455 -84.341 -51.765 1.00 46.57 C
ATOM 12 O2' G B 81 32.424 -84.704 -52.732 1.00 53.35 O
ATOM 13 C1' G B 81 30.607 -83.198 -52.326 1.00 50.41 C
ATOM 14 N9 G B 81 30.113 -82.326 -51.255 1.00 57.15 N
ATOM 15 C8 G B 81 28.812 -81.997 -50.974 1.00 54.71 C
ATOM 16 N7 G B 81 28.711 -81.206 -49.938 1.00 52.49 N
ATOM 17 C5 G B 81 30.012 -81.024 -49.506 1.00 49.89 C
ATOM 18 C6 G B 81 30.525 -80.267 -48.434 1.00 52.43 C
ATOM 19 O6 G B 81 29.923 -79.584 -47.606 1.00 57.57 O
ATOM 20 N1 G B 81 31.897 -80.350 -48.371 1.00 48.84 N
ATOM 21 C2 G B 81 32.675 -81.070 -49.225 1.00 50.33 C
ATOM 22 N2 G B 81 33.984 -81.038 -48.999 1.00 58.79 N
ATOM 23 N3 G B 81 32.224 -81.777 -50.234 1.00 52.61 N
ATOM 24 C4 G B 81 30.887 -81.706 -50.311 1.00 51.18 C
ATOM 25 P G B 82 30.939 -87.586 -50.252 1.00 72.55 P
ATOM 26 OP1 G B 82 31.174 -88.991 -50.636 1.00 86.44 O
ATOM 27 OP2 G B 82 29.694 -87.243 -49.546 1.00 75.82 O
ATOM 28 O5' G B 82 32.180 -87.033 -49.451 1.00 72.59 O
TER
ATOM 2 P G A 53 19.573 -73.595 -47.647 1.00 48.00 P
ATOM 3 OP1 G A 53 18.158 -73.847 -48.017 1.00 48.57 O
ATOM 4 OP2 G A 53 19.867 -72.990 -46.332 1.00 50.03 O
ATOM 5 O5' G A 53 20.425 -74.924 -47.843 1.00 36.49 O
ATOM 6 C5' G A 53 20.512 -75.531 -49.125 1.00 38.34 C
ATOM 7 C4' G A 53 20.463 -77.028 -49.038 1.00 38.54 C
ATOM 8 O4' G A 53 21.796 -77.510 -48.764 1.00 39.84 O
ATOM 9 C3' G A 53 19.572 -77.591 -47.930 1.00 44.00 C
ATOM 10 O3' G A 53 19.047 -78.860 -48.325 1.00 42.76 O
ATOM 11 C2' G A 53 20.558 -77.807 -46.800 1.00 45.52 C
ATOM 12 O2' G A 53 20.157 -78.783 -45.867 1.00 48.38 O
ATOM 13 C1' G A 53 21.797 -78.247 -47.564 1.00 45.80 C
ATOM 14 N9 G A 53 23.048 -77.973 -46.871 1.00 53.36 N
ATOM 15 C8 G A 53 23.234 -77.282 -45.710 1.00 54.15 C
ATOM 16 N7 G A 53 24.487 -77.235 -45.363 1.00 55.73 N
ATOM 17 C5 G A 53 25.153 -77.932 -46.351 1.00 57.84 C
ATOM 18 C6 G A 53 26.528 -78.205 -46.512 1.00 57.75 C
ATOM 19 O6 G A 53 27.451 -77.867 -45.767 1.00 56.32 O
ATOM 20 N1 G A 53 26.770 -78.943 -47.665 1.00 49.99 N
ATOM 21 C2 G A 53 25.806 -79.363 -48.544 1.00 47.75 C
ATOM 22 N2 G A 53 26.225 -80.052 -49.604 1.00 50.37 N
ATOM 23 N3 G A 53 24.518 -79.123 -48.404 1.00 47.78 N
ATOM 24 C4 G A 53 24.274 -78.404 -47.289 1.00 55.01 C
ATOM 25 P G A 54 17.552 -78.975 -48.870 1.00 51.23 P
ATOM 26 OP1 G A 54 17.531 -80.079 -49.852 1.00 54.61 O
ATOM 27 OP2 G A 54 17.143 -77.614 -49.309 1.00 45.96 O
ATOM 28 O5' G A 54 16.740 -79.391 -47.584 1.00 47.08 O
TER
ATOM 1 O3' C B 80 25.226 -85.409 -53.097 1.00 50.65 O
ATOM 2 P G B 81 25.815 -85.486 -51.609 1.00 65.28 P
ATOM 3 OP1 G B 81 25.736 -86.895 -51.189 1.00 53.51 O
ATOM 4 OP2 G B 81 25.109 -84.463 -50.811 1.00 55.61 O
ATOM 5 O5' G B 81 27.343 -85.071 -51.810 1.00 51.91 O
ATOM 6 C5' G B 81 28.143 -85.759 -52.760 1.00 53.41 C
ATOM 7 C4' G B 81 29.539 -85.204 -52.839 1.00 46.42 C
ATOM 8 O4' G B 81 29.495 -83.769 -52.980 1.00 44.46 O
ATOM 9 C3' G B 81 30.421 -85.431 -51.622 1.00 45.74 C
ATOM 10 O3' G B 81 30.982 -86.722 -51.592 1.00 56.91 O
ATOM 11 C2' G B 81 31.455 -84.341 -51.765 1.00 46.57 C
ATOM 12 O2' G B 81 32.424 -84.704 -52.732 1.00 53.35 O
ATOM 13 C1' G B 81 30.607 -83.198 -52.326 1.00 50.41 C
ATOM 14 N9 G B 81 30.113 -82.326 -51.255 1.00 57.15 N
ATOM 15 C8 G B 81 28.812 -81.997 -50.974 1.00 54.71 C
ATOM 16 N7 G B 81 28.711 -81.206 -49.938 1.00 52.49 N
ATOM 17 C5 G B 81 30.012 -81.024 -49.506 1.00 49.89 C
ATOM 18 C6 G B 81 30.525 -80.267 -48.434 1.00 52.43 C
ATOM 19 O6 G B 81 29.923 -79.584 -47.606 1.00 57.57 O
ATOM 20 N1 G B 81 31.897 -80.350 -48.371 1.00 48.84 N
ATOM 21 C2 G B 81 32.675 -81.070 -49.225 1.00 50.33 C
ATOM 22 N2 G B 81 33.984 -81.038 -48.999 1.00 58.79 N
ATOM 23 N3 G B 81 32.224 -81.777 -50.234 1.00 52.61 N
ATOM 24 C4 G B 81 30.887 -81.706 -50.311 1.00 51.18 C
ATOM 25 P G B 82 30.939 -87.586 -50.252 1.00 72.55 P
ATOM 26 OP1 G B 82 31.174 -88.991 -50.636 1.00 86.44 O
ATOM 27 OP2 G B 82 29.694 -87.243 -49.546 1.00 75.82 O
ATOM 28 O5' G B 82 32.180 -87.033 -49.451 1.00 72.59 O
TER
Atoms:
OP1: (18.158,-73.847,-48.017)
OP2: (19.867,-72.990,-46.332)
C3': (19.572,-77.591,-47.930)
C1': (21.797,-78.247,-47.564)
C5': (20.512,-75.531,-49.125)
O6: (27.451,-77.867,-45.767)
O4': (21.796,-77.510,-48.764)
C8: (23.234,-77.282,-45.710)
C2: (25.806,-79.363,-48.544)
C6: (26.528,-78.205,-46.512)
C5: (25.153,-77.932,-46.351)
C4: (24.274,-78.404,-47.289)
P: (19.573,-73.595,-47.647)
C4': (20.463,-77.028,-49.038)
C2': (20.558,-77.807,-46.800)
O2': (20.157,-78.783,-45.867)
N1: (26.770,-78.943,-47.665)
N2: (26.225,-80.052,-49.604)
N3: (24.518,-79.123,-48.404)
N7: (24.487,-77.235,-45.363)
N9: (23.048,-77.973,-46.871)
O5': (20.425,-74.924,-47.843)
O3': (19.047,-78.860,-48.325)
OP2: (19.867,-72.990,-46.332)
C3': (19.572,-77.591,-47.930)
C1': (21.797,-78.247,-47.564)
C5': (20.512,-75.531,-49.125)
O6: (27.451,-77.867,-45.767)
O4': (21.796,-77.510,-48.764)
C8: (23.234,-77.282,-45.710)
C2: (25.806,-79.363,-48.544)
C6: (26.528,-78.205,-46.512)
C5: (25.153,-77.932,-46.351)
C4: (24.274,-78.404,-47.289)
P: (19.573,-73.595,-47.647)
C4': (20.463,-77.028,-49.038)
C2': (20.558,-77.807,-46.800)
O2': (20.157,-78.783,-45.867)
N1: (26.770,-78.943,-47.665)
N2: (26.225,-80.052,-49.604)
N3: (24.518,-79.123,-48.404)
N7: (24.487,-77.235,-45.363)
N9: (23.048,-77.973,-46.871)
O5': (20.425,-74.924,-47.843)
O3': (19.047,-78.860,-48.325)
OP1: (25.736,-86.895,-51.189)
OP2: (25.109,-84.463,-50.811)
C3': (30.421,-85.431,-51.622)
C1': (30.607,-83.198,-52.326)
C5': (28.143,-85.759,-52.760)
O6: (29.923,-79.584,-47.606)
O4': (29.495,-83.769,-52.980)
C8: (28.812,-81.997,-50.974)
C2: (32.675,-81.070,-49.225)
C6: (30.525,-80.267,-48.434)
C5: (30.012,-81.024,-49.506)
C4: (30.887,-81.706,-50.311)
P: (25.815,-85.486,-51.609)
C4': (29.539,-85.204,-52.839)
C2': (31.455,-84.341,-51.765)
O2': (32.424,-84.704,-52.732)
N1: (31.897,-80.350,-48.371)
N2: (33.984,-81.038,-48.999)
N3: (32.224,-81.777,-50.234)
N7: (28.711,-81.206,-49.938)
N9: (30.113,-82.326,-51.255)
O5': (27.343,-85.071,-51.810)
O3': (30.982,-86.722,-51.592)
OP2: (25.109,-84.463,-50.811)
C3': (30.421,-85.431,-51.622)
C1': (30.607,-83.198,-52.326)
C5': (28.143,-85.759,-52.760)
O6: (29.923,-79.584,-47.606)
O4': (29.495,-83.769,-52.980)
C8: (28.812,-81.997,-50.974)
C2: (32.675,-81.070,-49.225)
C6: (30.525,-80.267,-48.434)
C5: (30.012,-81.024,-49.506)
C4: (30.887,-81.706,-50.311)
P: (25.815,-85.486,-51.609)
C4': (29.539,-85.204,-52.839)
C2': (31.455,-84.341,-51.765)
O2': (32.424,-84.704,-52.732)
N1: (31.897,-80.350,-48.371)
N2: (33.984,-81.038,-48.999)
N3: (32.224,-81.777,-50.234)
N7: (28.711,-81.206,-49.938)
N9: (30.113,-82.326,-51.255)
O5': (27.343,-85.071,-51.810)
O3': (30.982,-86.722,-51.592)
Image (generated by PyMOL):