Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A53:A81
Extra
PDB:
ATOM 1 O3' U A 52 20.337 -72.396 -48.704 1.00 48.00 O
ATOM 2 P G A 53 19.734 -73.419 -47.608 1.00 44.36 P
ATOM 3 OP1 G A 53 18.306 -73.613 -47.945 1.00 51.91 O
ATOM 4 OP2 G A 53 20.081 -72.893 -46.281 1.00 48.96 O
ATOM 5 O5' G A 53 20.531 -74.759 -47.877 1.00 37.29 O
ATOM 6 C5' G A 53 20.526 -75.362 -49.161 1.00 35.50 C
ATOM 7 C4' G A 53 20.563 -76.860 -49.058 1.00 42.20 C
ATOM 8 O4' G A 53 21.925 -77.289 -48.788 1.00 43.43 O
ATOM 9 C3' G A 53 19.712 -77.447 -47.934 1.00 50.67 C
ATOM 10 O3' G A 53 19.226 -78.731 -48.321 1.00 54.37 O
ATOM 11 C2' G A 53 20.725 -77.632 -46.822 1.00 44.46 C
ATOM 12 O2' G A 53 20.360 -78.600 -45.873 1.00 52.30 O
ATOM 13 C1' G A 53 21.948 -78.064 -47.608 1.00 43.36 C
ATOM 14 N9 G A 53 23.217 -77.826 -46.913 1.00 47.02 N
ATOM 15 C8 G A 53 23.398 -77.082 -45.785 1.00 50.14 C
ATOM 16 N7 G A 53 24.630 -77.059 -45.388 1.00 50.87 N
ATOM 17 C5 G A 53 25.303 -77.836 -46.300 1.00 50.05 C
ATOM 18 C6 G A 53 26.669 -78.151 -46.378 1.00 54.74 C
ATOM 19 O6 G A 53 27.566 -77.794 -45.614 1.00 52.16 O
ATOM 20 N1 G A 53 26.944 -78.965 -47.466 1.00 57.88 N
ATOM 21 C2 G A 53 26.012 -79.412 -48.364 1.00 54.94 C
ATOM 22 N2 G A 53 26.472 -80.187 -49.352 1.00 49.88 N
ATOM 23 N3 G A 53 24.728 -79.114 -48.302 1.00 54.85 N
ATOM 24 C4 G A 53 24.448 -78.330 -47.243 1.00 49.60 C
ATOM 25 P G A 54 17.706 -78.926 -48.779 1.00 44.37 P
ATOM 26 OP1 G A 54 17.686 -80.126 -49.644 1.00 43.40 O
ATOM 27 OP2 G A 54 17.238 -77.623 -49.334 1.00 44.15 O
ATOM 28 O5' G A 54 16.961 -79.214 -47.422 1.00 43.37 O
TER
ATOM 1 O3' C B 80 25.343 -85.105 -52.978 1.00 47.02 O
ATOM 2 P G B 81 26.118 -85.224 -51.576 1.00 58.97 P
ATOM 3 OP1 G B 81 26.103 -86.647 -51.173 1.00 49.17 O
ATOM 4 OP2 G B 81 25.513 -84.229 -50.680 1.00 45.28 O
ATOM 5 O5' G B 81 27.605 -84.799 -51.956 1.00 51.26 O
ATOM 6 C5' G B 81 28.360 -85.582 -52.867 1.00 49.05 C
ATOM 7 C4' G B 81 29.808 -85.176 -52.885 1.00 48.01 C
ATOM 8 O4' G B 81 29.909 -83.751 -53.049 1.00 50.83 O
ATOM 9 C3' G B 81 30.600 -85.461 -51.623 1.00 48.32 C
ATOM 10 O3' G B 81 31.072 -86.786 -51.568 1.00 57.88 O
ATOM 11 C2' G B 81 31.713 -84.444 -51.697 1.00 49.24 C
ATOM 12 O2' G B 81 32.702 -84.865 -52.610 1.00 51.02 O
ATOM 13 C1' G B 81 30.991 -83.258 -52.300 1.00 51.84 C
ATOM 14 N9 G B 81 30.457 -82.365 -51.270 1.00 55.12 N
ATOM 15 C8 G B 81 29.140 -82.023 -51.103 1.00 53.04 C
ATOM 16 N7 G B 81 28.956 -81.195 -50.112 1.00 54.84 N
ATOM 17 C5 G B 81 30.229 -80.983 -49.613 1.00 52.29 C
ATOM 18 C6 G B 81 30.658 -80.174 -48.545 1.00 52.59 C
ATOM 19 O6 G B 81 29.950 -79.483 -47.818 1.00 54.51 O
ATOM 20 N1 G B 81 32.037 -80.230 -48.357 1.00 52.04 N
ATOM 21 C2 G B 81 32.873 -80.984 -49.127 1.00 52.45 C
ATOM 22 N2 G B 81 34.159 -80.940 -48.815 1.00 57.16 N
ATOM 23 N3 G B 81 32.492 -81.742 -50.135 1.00 58.02 N
ATOM 24 C4 G B 81 31.164 -81.695 -50.316 1.00 55.17 C
ATOM 25 P G B 82 31.160 -87.544 -50.169 1.00 80.57 P
ATOM 26 OP1 G B 82 31.560 -88.936 -50.454 1.00 82.44 O
ATOM 27 OP2 G B 82 29.889 -87.307 -49.453 1.00 79.95 O
ATOM 28 O5' G B 82 32.334 -86.770 -49.448 1.00 65.47 O
TER
ATOM 2 P G A 53 19.734 -73.419 -47.608 1.00 44.36 P
ATOM 3 OP1 G A 53 18.306 -73.613 -47.945 1.00 51.91 O
ATOM 4 OP2 G A 53 20.081 -72.893 -46.281 1.00 48.96 O
ATOM 5 O5' G A 53 20.531 -74.759 -47.877 1.00 37.29 O
ATOM 6 C5' G A 53 20.526 -75.362 -49.161 1.00 35.50 C
ATOM 7 C4' G A 53 20.563 -76.860 -49.058 1.00 42.20 C
ATOM 8 O4' G A 53 21.925 -77.289 -48.788 1.00 43.43 O
ATOM 9 C3' G A 53 19.712 -77.447 -47.934 1.00 50.67 C
ATOM 10 O3' G A 53 19.226 -78.731 -48.321 1.00 54.37 O
ATOM 11 C2' G A 53 20.725 -77.632 -46.822 1.00 44.46 C
ATOM 12 O2' G A 53 20.360 -78.600 -45.873 1.00 52.30 O
ATOM 13 C1' G A 53 21.948 -78.064 -47.608 1.00 43.36 C
ATOM 14 N9 G A 53 23.217 -77.826 -46.913 1.00 47.02 N
ATOM 15 C8 G A 53 23.398 -77.082 -45.785 1.00 50.14 C
ATOM 16 N7 G A 53 24.630 -77.059 -45.388 1.00 50.87 N
ATOM 17 C5 G A 53 25.303 -77.836 -46.300 1.00 50.05 C
ATOM 18 C6 G A 53 26.669 -78.151 -46.378 1.00 54.74 C
ATOM 19 O6 G A 53 27.566 -77.794 -45.614 1.00 52.16 O
ATOM 20 N1 G A 53 26.944 -78.965 -47.466 1.00 57.88 N
ATOM 21 C2 G A 53 26.012 -79.412 -48.364 1.00 54.94 C
ATOM 22 N2 G A 53 26.472 -80.187 -49.352 1.00 49.88 N
ATOM 23 N3 G A 53 24.728 -79.114 -48.302 1.00 54.85 N
ATOM 24 C4 G A 53 24.448 -78.330 -47.243 1.00 49.60 C
ATOM 25 P G A 54 17.706 -78.926 -48.779 1.00 44.37 P
ATOM 26 OP1 G A 54 17.686 -80.126 -49.644 1.00 43.40 O
ATOM 27 OP2 G A 54 17.238 -77.623 -49.334 1.00 44.15 O
ATOM 28 O5' G A 54 16.961 -79.214 -47.422 1.00 43.37 O
TER
ATOM 1 O3' C B 80 25.343 -85.105 -52.978 1.00 47.02 O
ATOM 2 P G B 81 26.118 -85.224 -51.576 1.00 58.97 P
ATOM 3 OP1 G B 81 26.103 -86.647 -51.173 1.00 49.17 O
ATOM 4 OP2 G B 81 25.513 -84.229 -50.680 1.00 45.28 O
ATOM 5 O5' G B 81 27.605 -84.799 -51.956 1.00 51.26 O
ATOM 6 C5' G B 81 28.360 -85.582 -52.867 1.00 49.05 C
ATOM 7 C4' G B 81 29.808 -85.176 -52.885 1.00 48.01 C
ATOM 8 O4' G B 81 29.909 -83.751 -53.049 1.00 50.83 O
ATOM 9 C3' G B 81 30.600 -85.461 -51.623 1.00 48.32 C
ATOM 10 O3' G B 81 31.072 -86.786 -51.568 1.00 57.88 O
ATOM 11 C2' G B 81 31.713 -84.444 -51.697 1.00 49.24 C
ATOM 12 O2' G B 81 32.702 -84.865 -52.610 1.00 51.02 O
ATOM 13 C1' G B 81 30.991 -83.258 -52.300 1.00 51.84 C
ATOM 14 N9 G B 81 30.457 -82.365 -51.270 1.00 55.12 N
ATOM 15 C8 G B 81 29.140 -82.023 -51.103 1.00 53.04 C
ATOM 16 N7 G B 81 28.956 -81.195 -50.112 1.00 54.84 N
ATOM 17 C5 G B 81 30.229 -80.983 -49.613 1.00 52.29 C
ATOM 18 C6 G B 81 30.658 -80.174 -48.545 1.00 52.59 C
ATOM 19 O6 G B 81 29.950 -79.483 -47.818 1.00 54.51 O
ATOM 20 N1 G B 81 32.037 -80.230 -48.357 1.00 52.04 N
ATOM 21 C2 G B 81 32.873 -80.984 -49.127 1.00 52.45 C
ATOM 22 N2 G B 81 34.159 -80.940 -48.815 1.00 57.16 N
ATOM 23 N3 G B 81 32.492 -81.742 -50.135 1.00 58.02 N
ATOM 24 C4 G B 81 31.164 -81.695 -50.316 1.00 55.17 C
ATOM 25 P G B 82 31.160 -87.544 -50.169 1.00 80.57 P
ATOM 26 OP1 G B 82 31.560 -88.936 -50.454 1.00 82.44 O
ATOM 27 OP2 G B 82 29.889 -87.307 -49.453 1.00 79.95 O
ATOM 28 O5' G B 82 32.334 -86.770 -49.448 1.00 65.47 O
TER
Atoms:
OP1: (18.306,-73.613,-47.945)
OP2: (20.081,-72.893,-46.281)
C3': (19.712,-77.447,-47.934)
C1': (21.948,-78.064,-47.608)
C5': (20.526,-75.362,-49.161)
O6: (27.566,-77.794,-45.614)
O4': (21.925,-77.289,-48.788)
C8: (23.398,-77.082,-45.785)
C2: (26.012,-79.412,-48.364)
C6: (26.669,-78.151,-46.378)
C5: (25.303,-77.836,-46.300)
C4: (24.448,-78.330,-47.243)
P: (19.734,-73.419,-47.608)
C4': (20.563,-76.860,-49.058)
C2': (20.725,-77.632,-46.822)
O2': (20.360,-78.600,-45.873)
N1: (26.944,-78.965,-47.466)
N2: (26.472,-80.187,-49.352)
N3: (24.728,-79.114,-48.302)
N7: (24.630,-77.059,-45.388)
N9: (23.217,-77.826,-46.913)
O5': (20.531,-74.759,-47.877)
O3': (19.226,-78.731,-48.321)
OP2: (20.081,-72.893,-46.281)
C3': (19.712,-77.447,-47.934)
C1': (21.948,-78.064,-47.608)
C5': (20.526,-75.362,-49.161)
O6: (27.566,-77.794,-45.614)
O4': (21.925,-77.289,-48.788)
C8: (23.398,-77.082,-45.785)
C2: (26.012,-79.412,-48.364)
C6: (26.669,-78.151,-46.378)
C5: (25.303,-77.836,-46.300)
C4: (24.448,-78.330,-47.243)
P: (19.734,-73.419,-47.608)
C4': (20.563,-76.860,-49.058)
C2': (20.725,-77.632,-46.822)
O2': (20.360,-78.600,-45.873)
N1: (26.944,-78.965,-47.466)
N2: (26.472,-80.187,-49.352)
N3: (24.728,-79.114,-48.302)
N7: (24.630,-77.059,-45.388)
N9: (23.217,-77.826,-46.913)
O5': (20.531,-74.759,-47.877)
O3': (19.226,-78.731,-48.321)
OP1: (26.103,-86.647,-51.173)
OP2: (25.513,-84.229,-50.680)
C3': (30.600,-85.461,-51.623)
C1': (30.991,-83.258,-52.300)
C5': (28.360,-85.582,-52.867)
O6: (29.950,-79.483,-47.818)
O4': (29.909,-83.751,-53.049)
C8: (29.140,-82.023,-51.103)
C2: (32.873,-80.984,-49.127)
C6: (30.658,-80.174,-48.545)
C5: (30.229,-80.983,-49.613)
C4: (31.164,-81.695,-50.316)
P: (26.118,-85.224,-51.576)
C4': (29.808,-85.176,-52.885)
C2': (31.713,-84.444,-51.697)
O2': (32.702,-84.865,-52.610)
N1: (32.037,-80.230,-48.357)
N2: (34.159,-80.940,-48.815)
N3: (32.492,-81.742,-50.135)
N7: (28.956,-81.195,-50.112)
N9: (30.457,-82.365,-51.270)
O5': (27.605,-84.799,-51.956)
O3': (31.072,-86.786,-51.568)
OP2: (25.513,-84.229,-50.680)
C3': (30.600,-85.461,-51.623)
C1': (30.991,-83.258,-52.300)
C5': (28.360,-85.582,-52.867)
O6: (29.950,-79.483,-47.818)
O4': (29.909,-83.751,-53.049)
C8: (29.140,-82.023,-51.103)
C2: (32.873,-80.984,-49.127)
C6: (30.658,-80.174,-48.545)
C5: (30.229,-80.983,-49.613)
C4: (31.164,-81.695,-50.316)
P: (26.118,-85.224,-51.576)
C4': (29.808,-85.176,-52.885)
C2': (31.713,-84.444,-51.697)
O2': (32.702,-84.865,-52.610)
N1: (32.037,-80.230,-48.357)
N2: (34.159,-80.940,-48.815)
N3: (32.492,-81.742,-50.135)
N7: (28.956,-81.195,-50.112)
N9: (30.457,-82.365,-51.270)
O5': (27.605,-84.799,-51.956)
O3': (31.072,-86.786,-51.568)
Image (generated by PyMOL):