Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1C:M2:N5
Extra
PDB:
ATOM 1 O3' C A 1 40.206 -6.398 80.996 1.00 21.54 O
ATOM 2 P G A 2 39.544 -5.465 79.876 1.00 26.42 P
ATOM 3 OP1 G A 2 38.397 -4.855 80.571 1.00 23.36 O
ATOM 4 OP2 G A 2 39.359 -6.145 78.572 1.00 16.47 O
ATOM 5 O5' G A 2 40.679 -4.365 79.592 1.00 21.28 O
ATOM 6 C5' G A 2 41.053 -3.426 80.571 1.00 18.86 C
ATOM 7 C4' G A 2 42.313 -2.701 80.118 1.00 16.76 C
ATOM 8 O4' G A 2 43.354 -3.677 79.891 1.00 17.82 O
ATOM 9 C3' G A 2 42.262 -1.962 78.791 1.00 14.17 C
ATOM 10 O3' G A 2 41.602 -0.712 78.950 1.00 17.50 O
ATOM 11 C2' G A 2 43.754 -1.785 78.568 1.00 15.40 C
ATOM 12 O2' G A 2 44.315 -0.888 79.501 1.00 14.62 O
ATOM 13 C1' G A 2 44.245 -3.191 78.910 1.00 16.29 C
ATOM 14 N9 G A 2 44.247 -4.086 77.758 1.00 15.71 N
ATOM 15 C8 G A 2 43.404 -5.145 77.482 1.00 18.45 C
ATOM 16 N7 G A 2 43.684 -5.745 76.350 1.00 16.58 N
ATOM 17 C5 G A 2 44.774 -5.031 75.854 1.00 19.73 C
ATOM 18 C6 G A 2 45.525 -5.194 74.664 1.00 22.37 C
ATOM 19 O6 G A 2 45.369 -6.037 73.777 1.00 17.49 O
ATOM 20 N1 G A 2 46.556 -4.256 74.549 1.00 19.32 N
ATOM 21 C2 G A 2 46.828 -3.266 75.466 1.00 20.19 C
ATOM 22 N2 G A 2 47.854 -2.440 75.183 1.00 15.31 N
ATOM 23 N3 G A 2 46.139 -3.105 76.588 1.00 17.03 N
ATOM 24 C4 G A 2 45.130 -4.010 76.708 1.00 17.02 C
ATOM 25 P G A 3 41.007 0.056 77.677 1.00 18.63 P
ATOM 26 OP1 G A 3 40.176 1.151 78.213 1.00 15.45 O
ATOM 27 OP2 G A 3 40.446 -0.901 76.708 1.00 20.47 O
ATOM 28 O5' G A 3 42.298 0.647 76.947 1.00 14.76 O
TER
ATOM 1 O3' C B 4 53.782 -4.036 65.903 1.00 34.22 O
ATOM 2 P G B 5 54.441 -4.903 67.062 1.00 36.94 P
ATOM 3 OP1 G B 5 55.810 -5.276 66.648 1.00 46.80 O
ATOM 4 OP2 G B 5 53.468 -5.946 67.463 1.00 32.51 O
ATOM 5 O5' G B 5 54.570 -3.819 68.226 1.00 36.94 O
ATOM 6 C5' G B 5 54.395 -4.198 69.580 1.00 32.49 C
ATOM 7 C4' G B 5 54.231 -2.954 70.437 1.00 30.09 C
ATOM 8 O4' G B 5 53.023 -2.233 70.064 1.00 29.26 O
ATOM 9 C3' G B 5 54.074 -3.224 71.920 1.00 22.75 C
ATOM 10 O3' G B 5 55.361 -3.352 72.489 1.00 25.19 O
ATOM 11 C2' G B 5 53.441 -1.907 72.336 1.00 25.65 C
ATOM 12 O2' G B 5 54.390 -0.860 72.324 1.00 29.81 O
ATOM 13 C1' G B 5 52.417 -1.714 71.228 1.00 27.45 C
ATOM 14 N9 G B 5 51.184 -2.422 71.556 1.00 26.37 N
ATOM 15 C8 G B 5 50.307 -2.021 72.531 1.00 25.31 C
ATOM 16 N7 G B 5 49.285 -2.809 72.672 1.00 26.10 N
ATOM 17 C5 G B 5 49.491 -3.807 71.733 1.00 25.24 C
ATOM 18 C6 G B 5 48.687 -4.938 71.441 1.00 23.67 C
ATOM 19 O6 G B 5 47.619 -5.271 71.972 1.00 26.71 O
ATOM 20 N1 G B 5 49.239 -5.708 70.424 1.00 26.68 N
ATOM 21 C2 G B 5 50.420 -5.417 69.779 1.00 31.64 C
ATOM 22 N2 G B 5 50.795 -6.279 68.821 1.00 35.77 N
ATOM 23 N3 G B 5 51.186 -4.364 70.048 1.00 30.24 N
ATOM 24 C4 G B 5 50.661 -3.594 71.037 1.00 27.34 C
ATOM 25 P G B 6 55.576 -4.292 73.756 1.00 26.05 P
ATOM 26 OP1 G B 6 56.963 -4.137 74.231 1.00 27.03 O
ATOM 27 OP2 G B 6 55.050 -5.637 73.427 1.00 25.55 O
ATOM 28 O5' G B 6 54.619 -3.584 74.824 1.00 24.61 O
TER
ATOM 2 P G A 2 39.544 -5.465 79.876 1.00 26.42 P
ATOM 3 OP1 G A 2 38.397 -4.855 80.571 1.00 23.36 O
ATOM 4 OP2 G A 2 39.359 -6.145 78.572 1.00 16.47 O
ATOM 5 O5' G A 2 40.679 -4.365 79.592 1.00 21.28 O
ATOM 6 C5' G A 2 41.053 -3.426 80.571 1.00 18.86 C
ATOM 7 C4' G A 2 42.313 -2.701 80.118 1.00 16.76 C
ATOM 8 O4' G A 2 43.354 -3.677 79.891 1.00 17.82 O
ATOM 9 C3' G A 2 42.262 -1.962 78.791 1.00 14.17 C
ATOM 10 O3' G A 2 41.602 -0.712 78.950 1.00 17.50 O
ATOM 11 C2' G A 2 43.754 -1.785 78.568 1.00 15.40 C
ATOM 12 O2' G A 2 44.315 -0.888 79.501 1.00 14.62 O
ATOM 13 C1' G A 2 44.245 -3.191 78.910 1.00 16.29 C
ATOM 14 N9 G A 2 44.247 -4.086 77.758 1.00 15.71 N
ATOM 15 C8 G A 2 43.404 -5.145 77.482 1.00 18.45 C
ATOM 16 N7 G A 2 43.684 -5.745 76.350 1.00 16.58 N
ATOM 17 C5 G A 2 44.774 -5.031 75.854 1.00 19.73 C
ATOM 18 C6 G A 2 45.525 -5.194 74.664 1.00 22.37 C
ATOM 19 O6 G A 2 45.369 -6.037 73.777 1.00 17.49 O
ATOM 20 N1 G A 2 46.556 -4.256 74.549 1.00 19.32 N
ATOM 21 C2 G A 2 46.828 -3.266 75.466 1.00 20.19 C
ATOM 22 N2 G A 2 47.854 -2.440 75.183 1.00 15.31 N
ATOM 23 N3 G A 2 46.139 -3.105 76.588 1.00 17.03 N
ATOM 24 C4 G A 2 45.130 -4.010 76.708 1.00 17.02 C
ATOM 25 P G A 3 41.007 0.056 77.677 1.00 18.63 P
ATOM 26 OP1 G A 3 40.176 1.151 78.213 1.00 15.45 O
ATOM 27 OP2 G A 3 40.446 -0.901 76.708 1.00 20.47 O
ATOM 28 O5' G A 3 42.298 0.647 76.947 1.00 14.76 O
TER
ATOM 1 O3' C B 4 53.782 -4.036 65.903 1.00 34.22 O
ATOM 2 P G B 5 54.441 -4.903 67.062 1.00 36.94 P
ATOM 3 OP1 G B 5 55.810 -5.276 66.648 1.00 46.80 O
ATOM 4 OP2 G B 5 53.468 -5.946 67.463 1.00 32.51 O
ATOM 5 O5' G B 5 54.570 -3.819 68.226 1.00 36.94 O
ATOM 6 C5' G B 5 54.395 -4.198 69.580 1.00 32.49 C
ATOM 7 C4' G B 5 54.231 -2.954 70.437 1.00 30.09 C
ATOM 8 O4' G B 5 53.023 -2.233 70.064 1.00 29.26 O
ATOM 9 C3' G B 5 54.074 -3.224 71.920 1.00 22.75 C
ATOM 10 O3' G B 5 55.361 -3.352 72.489 1.00 25.19 O
ATOM 11 C2' G B 5 53.441 -1.907 72.336 1.00 25.65 C
ATOM 12 O2' G B 5 54.390 -0.860 72.324 1.00 29.81 O
ATOM 13 C1' G B 5 52.417 -1.714 71.228 1.00 27.45 C
ATOM 14 N9 G B 5 51.184 -2.422 71.556 1.00 26.37 N
ATOM 15 C8 G B 5 50.307 -2.021 72.531 1.00 25.31 C
ATOM 16 N7 G B 5 49.285 -2.809 72.672 1.00 26.10 N
ATOM 17 C5 G B 5 49.491 -3.807 71.733 1.00 25.24 C
ATOM 18 C6 G B 5 48.687 -4.938 71.441 1.00 23.67 C
ATOM 19 O6 G B 5 47.619 -5.271 71.972 1.00 26.71 O
ATOM 20 N1 G B 5 49.239 -5.708 70.424 1.00 26.68 N
ATOM 21 C2 G B 5 50.420 -5.417 69.779 1.00 31.64 C
ATOM 22 N2 G B 5 50.795 -6.279 68.821 1.00 35.77 N
ATOM 23 N3 G B 5 51.186 -4.364 70.048 1.00 30.24 N
ATOM 24 C4 G B 5 50.661 -3.594 71.037 1.00 27.34 C
ATOM 25 P G B 6 55.576 -4.292 73.756 1.00 26.05 P
ATOM 26 OP1 G B 6 56.963 -4.137 74.231 1.00 27.03 O
ATOM 27 OP2 G B 6 55.050 -5.637 73.427 1.00 25.55 O
ATOM 28 O5' G B 6 54.619 -3.584 74.824 1.00 24.61 O
TER
Atoms:
OP1: (38.397,-4.855,80.571)
OP2: (39.359,-6.145,78.572)
C3': (42.262,-1.962,78.791)
C1': (44.245,-3.191,78.910)
C5': (41.053,-3.426,80.571)
O6: (45.369,-6.037,73.777)
O4': (43.354,-3.677,79.891)
C8: (43.404,-5.145,77.482)
C2: (46.828,-3.266,75.466)
C6: (45.525,-5.194,74.664)
C5: (44.774,-5.031,75.854)
C4: (45.130,-4.010,76.708)
P: (39.544,-5.465,79.876)
C4': (42.313,-2.701,80.118)
C2': (43.754,-1.785,78.568)
O2': (44.315,-0.888,79.501)
N1: (46.556,-4.256,74.549)
N2: (47.854,-2.440,75.183)
N3: (46.139,-3.105,76.588)
N7: (43.684,-5.745,76.350)
N9: (44.247,-4.086,77.758)
O5': (40.679,-4.365,79.592)
O3': (41.602,-0.712,78.950)
OP2: (39.359,-6.145,78.572)
C3': (42.262,-1.962,78.791)
C1': (44.245,-3.191,78.910)
C5': (41.053,-3.426,80.571)
O6: (45.369,-6.037,73.777)
O4': (43.354,-3.677,79.891)
C8: (43.404,-5.145,77.482)
C2: (46.828,-3.266,75.466)
C6: (45.525,-5.194,74.664)
C5: (44.774,-5.031,75.854)
C4: (45.130,-4.010,76.708)
P: (39.544,-5.465,79.876)
C4': (42.313,-2.701,80.118)
C2': (43.754,-1.785,78.568)
O2': (44.315,-0.888,79.501)
N1: (46.556,-4.256,74.549)
N2: (47.854,-2.440,75.183)
N3: (46.139,-3.105,76.588)
N7: (43.684,-5.745,76.350)
N9: (44.247,-4.086,77.758)
O5': (40.679,-4.365,79.592)
O3': (41.602,-0.712,78.950)
OP1: (55.810,-5.276,66.648)
OP2: (53.468,-5.946,67.463)
C3': (54.074,-3.224,71.920)
C1': (52.417,-1.714,71.228)
C5': (54.395,-4.198,69.580)
O6: (47.619,-5.271,71.972)
O4': (53.023,-2.233,70.064)
C8: (50.307,-2.021,72.531)
C2: (50.420,-5.417,69.779)
C6: (48.687,-4.938,71.441)
C5: (49.491,-3.807,71.733)
C4: (50.661,-3.594,71.037)
P: (54.441,-4.903,67.062)
C4': (54.231,-2.954,70.437)
C2': (53.441,-1.907,72.336)
O2': (54.390,-0.860,72.324)
N1: (49.239,-5.708,70.424)
N2: (50.795,-6.279,68.821)
N3: (51.186,-4.364,70.048)
N7: (49.285,-2.809,72.672)
N9: (51.184,-2.422,71.556)
O5': (54.570,-3.819,68.226)
O3': (55.361,-3.352,72.489)
OP2: (53.468,-5.946,67.463)
C3': (54.074,-3.224,71.920)
C1': (52.417,-1.714,71.228)
C5': (54.395,-4.198,69.580)
O6: (47.619,-5.271,71.972)
O4': (53.023,-2.233,70.064)
C8: (50.307,-2.021,72.531)
C2: (50.420,-5.417,69.779)
C6: (48.687,-4.938,71.441)
C5: (49.491,-3.807,71.733)
C4: (50.661,-3.594,71.037)
P: (54.441,-4.903,67.062)
C4': (54.231,-2.954,70.437)
C2': (53.441,-1.907,72.336)
O2': (54.390,-0.860,72.324)
N1: (49.239,-5.708,70.424)
N2: (50.795,-6.279,68.821)
N3: (51.186,-4.364,70.048)
N7: (49.285,-2.809,72.672)
N9: (51.184,-2.422,71.556)
O5': (54.570,-3.819,68.226)
O3': (55.361,-3.352,72.489)
Image (generated by PyMOL):