Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1C:U2:T5
Extra
PDB:
ATOM 1 O3' C A 1 39.817 -15.040 40.578 1.00 27.45 O
ATOM 2 P G A 2 38.814 -13.811 40.365 1.00 32.91 P
ATOM 3 OP1 G A 2 37.827 -14.268 39.364 1.00 33.72 O
ATOM 4 OP2 G A 2 39.576 -12.557 40.174 1.00 22.61 O
ATOM 5 O5' G A 2 38.105 -13.622 41.794 1.00 27.63 O
ATOM 6 C5' G A 2 37.281 -14.623 42.335 1.00 24.16 C
ATOM 7 C4' G A 2 37.059 -14.353 43.816 1.00 23.50 C
ATOM 8 O4' G A 2 38.336 -14.301 44.505 1.00 20.66 O
ATOM 9 C3' G A 2 36.430 -13.021 44.185 1.00 19.91 C
ATOM 10 O3' G A 2 35.050 -13.084 43.925 1.00 19.58 O
ATOM 11 C2' G A 2 36.729 -13.062 45.675 1.00 19.88 C
ATOM 12 O2' G A 2 35.984 -14.065 46.336 1.00 20.20 O
ATOM 13 C1' G A 2 38.191 -13.487 45.645 1.00 19.05 C
ATOM 14 N9 G A 2 39.101 -12.348 45.561 1.00 19.63 N
ATOM 15 C8 G A 2 39.862 -11.904 44.507 1.00 19.66 C
ATOM 16 N7 G A 2 40.557 -10.827 44.799 1.00 22.10 N
ATOM 17 C5 G A 2 40.226 -10.542 46.123 1.00 18.72 C
ATOM 18 C6 G A 2 40.659 -9.507 46.994 1.00 19.18 C
ATOM 19 O6 G A 2 41.462 -8.566 46.780 1.00 15.58 O
ATOM 20 N1 G A 2 40.046 -9.630 48.241 1.00 18.23 N
ATOM 21 C2 G A 2 39.152 -10.614 48.606 1.00 20.57 C
ATOM 22 N2 G A 2 38.668 -10.568 49.854 1.00 17.49 N
ATOM 23 N3 G A 2 38.748 -11.583 47.811 1.00 17.67 N
ATOM 24 C4 G A 2 39.328 -11.477 46.594 1.00 20.97 C
ATOM 25 P G A 3 34.159 -11.762 43.898 1.00 21.42 P
ATOM 26 OP1 G A 3 32.853 -12.129 43.324 1.00 21.66 O
ATOM 27 OP2 G A 3 34.933 -10.647 43.326 1.00 27.99 O
ATOM 28 O5' G A 3 33.975 -11.449 45.454 1.00 24.14 O
TER
ATOM 1 O3' C B 4 42.025 -2.629 56.694 1.00 26.93 O
ATOM 2 P G B 5 42.902 -3.950 56.917 1.00 26.78 P
ATOM 3 OP1 G B 5 43.587 -3.860 58.229 1.00 28.50 O
ATOM 4 OP2 G B 5 43.702 -4.192 55.695 1.00 22.30 O
ATOM 5 O5' G B 5 41.777 -5.075 56.989 1.00 24.55 O
ATOM 6 C5' G B 5 42.100 -6.382 56.562 1.00 25.22 C
ATOM 7 C4' G B 5 40.878 -7.267 56.689 1.00 24.10 C
ATOM 8 O4' G B 5 39.802 -6.721 55.879 1.00 26.43 O
ATOM 9 C3' G B 5 41.088 -8.682 56.180 1.00 23.85 C
ATOM 10 O3' G B 5 41.651 -9.519 57.186 1.00 27.63 O
ATOM 11 C2' G B 5 39.653 -9.069 55.861 1.00 23.43 C
ATOM 12 O2' G B 5 38.930 -9.455 57.009 1.00 28.68 O
ATOM 13 C1' G B 5 39.121 -7.782 55.228 1.00 23.06 C
ATOM 14 N9 G B 5 39.430 -7.829 53.794 1.00 23.27 N
ATOM 15 C8 G B 5 38.783 -8.634 52.886 1.00 22.66 C
ATOM 16 N7 G B 5 39.244 -8.535 51.671 1.00 22.57 N
ATOM 17 C5 G B 5 40.272 -7.609 51.764 1.00 21.03 C
ATOM 18 C6 G B 5 41.133 -7.109 50.752 1.00 21.82 C
ATOM 19 O6 G B 5 41.165 -7.390 49.539 1.00 21.90 O
ATOM 20 N1 G B 5 42.036 -6.180 51.257 1.00 24.28 N
ATOM 21 C2 G B 5 42.106 -5.796 52.572 1.00 26.14 C
ATOM 22 N2 G B 5 43.056 -4.891 52.854 1.00 25.00 N
ATOM 23 N3 G B 5 41.306 -6.263 53.533 1.00 26.80 N
ATOM 24 C4 G B 5 40.406 -7.164 53.065 1.00 22.89 C
ATOM 25 P G B 6 42.704 -10.678 56.823 1.00 27.83 P
ATOM 26 OP1 G B 6 43.077 -11.377 58.070 1.00 28.08 O
ATOM 27 OP2 G B 6 43.762 -10.111 55.960 1.00 23.53 O
ATOM 28 O5' G B 6 41.814 -11.678 55.958 1.00 23.97 O
TER
ATOM 2 P G A 2 38.814 -13.811 40.365 1.00 32.91 P
ATOM 3 OP1 G A 2 37.827 -14.268 39.364 1.00 33.72 O
ATOM 4 OP2 G A 2 39.576 -12.557 40.174 1.00 22.61 O
ATOM 5 O5' G A 2 38.105 -13.622 41.794 1.00 27.63 O
ATOM 6 C5' G A 2 37.281 -14.623 42.335 1.00 24.16 C
ATOM 7 C4' G A 2 37.059 -14.353 43.816 1.00 23.50 C
ATOM 8 O4' G A 2 38.336 -14.301 44.505 1.00 20.66 O
ATOM 9 C3' G A 2 36.430 -13.021 44.185 1.00 19.91 C
ATOM 10 O3' G A 2 35.050 -13.084 43.925 1.00 19.58 O
ATOM 11 C2' G A 2 36.729 -13.062 45.675 1.00 19.88 C
ATOM 12 O2' G A 2 35.984 -14.065 46.336 1.00 20.20 O
ATOM 13 C1' G A 2 38.191 -13.487 45.645 1.00 19.05 C
ATOM 14 N9 G A 2 39.101 -12.348 45.561 1.00 19.63 N
ATOM 15 C8 G A 2 39.862 -11.904 44.507 1.00 19.66 C
ATOM 16 N7 G A 2 40.557 -10.827 44.799 1.00 22.10 N
ATOM 17 C5 G A 2 40.226 -10.542 46.123 1.00 18.72 C
ATOM 18 C6 G A 2 40.659 -9.507 46.994 1.00 19.18 C
ATOM 19 O6 G A 2 41.462 -8.566 46.780 1.00 15.58 O
ATOM 20 N1 G A 2 40.046 -9.630 48.241 1.00 18.23 N
ATOM 21 C2 G A 2 39.152 -10.614 48.606 1.00 20.57 C
ATOM 22 N2 G A 2 38.668 -10.568 49.854 1.00 17.49 N
ATOM 23 N3 G A 2 38.748 -11.583 47.811 1.00 17.67 N
ATOM 24 C4 G A 2 39.328 -11.477 46.594 1.00 20.97 C
ATOM 25 P G A 3 34.159 -11.762 43.898 1.00 21.42 P
ATOM 26 OP1 G A 3 32.853 -12.129 43.324 1.00 21.66 O
ATOM 27 OP2 G A 3 34.933 -10.647 43.326 1.00 27.99 O
ATOM 28 O5' G A 3 33.975 -11.449 45.454 1.00 24.14 O
TER
ATOM 1 O3' C B 4 42.025 -2.629 56.694 1.00 26.93 O
ATOM 2 P G B 5 42.902 -3.950 56.917 1.00 26.78 P
ATOM 3 OP1 G B 5 43.587 -3.860 58.229 1.00 28.50 O
ATOM 4 OP2 G B 5 43.702 -4.192 55.695 1.00 22.30 O
ATOM 5 O5' G B 5 41.777 -5.075 56.989 1.00 24.55 O
ATOM 6 C5' G B 5 42.100 -6.382 56.562 1.00 25.22 C
ATOM 7 C4' G B 5 40.878 -7.267 56.689 1.00 24.10 C
ATOM 8 O4' G B 5 39.802 -6.721 55.879 1.00 26.43 O
ATOM 9 C3' G B 5 41.088 -8.682 56.180 1.00 23.85 C
ATOM 10 O3' G B 5 41.651 -9.519 57.186 1.00 27.63 O
ATOM 11 C2' G B 5 39.653 -9.069 55.861 1.00 23.43 C
ATOM 12 O2' G B 5 38.930 -9.455 57.009 1.00 28.68 O
ATOM 13 C1' G B 5 39.121 -7.782 55.228 1.00 23.06 C
ATOM 14 N9 G B 5 39.430 -7.829 53.794 1.00 23.27 N
ATOM 15 C8 G B 5 38.783 -8.634 52.886 1.00 22.66 C
ATOM 16 N7 G B 5 39.244 -8.535 51.671 1.00 22.57 N
ATOM 17 C5 G B 5 40.272 -7.609 51.764 1.00 21.03 C
ATOM 18 C6 G B 5 41.133 -7.109 50.752 1.00 21.82 C
ATOM 19 O6 G B 5 41.165 -7.390 49.539 1.00 21.90 O
ATOM 20 N1 G B 5 42.036 -6.180 51.257 1.00 24.28 N
ATOM 21 C2 G B 5 42.106 -5.796 52.572 1.00 26.14 C
ATOM 22 N2 G B 5 43.056 -4.891 52.854 1.00 25.00 N
ATOM 23 N3 G B 5 41.306 -6.263 53.533 1.00 26.80 N
ATOM 24 C4 G B 5 40.406 -7.164 53.065 1.00 22.89 C
ATOM 25 P G B 6 42.704 -10.678 56.823 1.00 27.83 P
ATOM 26 OP1 G B 6 43.077 -11.377 58.070 1.00 28.08 O
ATOM 27 OP2 G B 6 43.762 -10.111 55.960 1.00 23.53 O
ATOM 28 O5' G B 6 41.814 -11.678 55.958 1.00 23.97 O
TER
Atoms:
OP1: (37.827,-14.268,39.364)
OP2: (39.576,-12.557,40.174)
C3': (36.430,-13.021,44.185)
C1': (38.191,-13.487,45.645)
C5': (37.281,-14.623,42.335)
O6: (41.462,-8.566,46.780)
O4': (38.336,-14.301,44.505)
C8: (39.862,-11.904,44.507)
C2: (39.152,-10.614,48.606)
C6: (40.659,-9.507,46.994)
C5: (40.226,-10.542,46.123)
C4: (39.328,-11.477,46.594)
P: (38.814,-13.811,40.365)
C4': (37.059,-14.353,43.816)
C2': (36.729,-13.062,45.675)
O2': (35.984,-14.065,46.336)
N1: (40.046,-9.630,48.241)
N2: (38.668,-10.568,49.854)
N3: (38.748,-11.583,47.811)
N7: (40.557,-10.827,44.799)
N9: (39.101,-12.348,45.561)
O5': (38.105,-13.622,41.794)
O3': (35.050,-13.084,43.925)
OP2: (39.576,-12.557,40.174)
C3': (36.430,-13.021,44.185)
C1': (38.191,-13.487,45.645)
C5': (37.281,-14.623,42.335)
O6: (41.462,-8.566,46.780)
O4': (38.336,-14.301,44.505)
C8: (39.862,-11.904,44.507)
C2: (39.152,-10.614,48.606)
C6: (40.659,-9.507,46.994)
C5: (40.226,-10.542,46.123)
C4: (39.328,-11.477,46.594)
P: (38.814,-13.811,40.365)
C4': (37.059,-14.353,43.816)
C2': (36.729,-13.062,45.675)
O2': (35.984,-14.065,46.336)
N1: (40.046,-9.630,48.241)
N2: (38.668,-10.568,49.854)
N3: (38.748,-11.583,47.811)
N7: (40.557,-10.827,44.799)
N9: (39.101,-12.348,45.561)
O5': (38.105,-13.622,41.794)
O3': (35.050,-13.084,43.925)
OP1: (43.587,-3.860,58.229)
OP2: (43.702,-4.192,55.695)
C3': (41.088,-8.682,56.180)
C1': (39.121,-7.782,55.228)
C5': (42.100,-6.382,56.562)
O6: (41.165,-7.390,49.539)
O4': (39.802,-6.721,55.879)
C8: (38.783,-8.634,52.886)
C2: (42.106,-5.796,52.572)
C6: (41.133,-7.109,50.752)
C5: (40.272,-7.609,51.764)
C4: (40.406,-7.164,53.065)
P: (42.902,-3.950,56.917)
C4': (40.878,-7.267,56.689)
C2': (39.653,-9.069,55.861)
O2': (38.930,-9.455,57.009)
N1: (42.036,-6.180,51.257)
N2: (43.056,-4.891,52.854)
N3: (41.306,-6.263,53.533)
N7: (39.244,-8.535,51.671)
N9: (39.430,-7.829,53.794)
O5': (41.777,-5.075,56.989)
O3': (41.651,-9.519,57.186)
OP2: (43.702,-4.192,55.695)
C3': (41.088,-8.682,56.180)
C1': (39.121,-7.782,55.228)
C5': (42.100,-6.382,56.562)
O6: (41.165,-7.390,49.539)
O4': (39.802,-6.721,55.879)
C8: (38.783,-8.634,52.886)
C2: (42.106,-5.796,52.572)
C6: (41.133,-7.109,50.752)
C5: (40.272,-7.609,51.764)
C4: (40.406,-7.164,53.065)
P: (42.902,-3.950,56.917)
C4': (40.878,-7.267,56.689)
C2': (39.653,-9.069,55.861)
O2': (38.930,-9.455,57.009)
N1: (42.036,-6.180,51.257)
N2: (43.056,-4.891,52.854)
N3: (41.306,-6.263,53.533)
N7: (39.244,-8.535,51.671)
N9: (39.430,-7.829,53.794)
O5': (41.777,-5.075,56.989)
O3': (41.651,-9.519,57.186)
Image (generated by PyMOL):