ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A62:A66

Extra

PDB:
ATOM 1 O3' C A 61 -6.046 15.452 123.474 1.00 20.50 O
ATOM 2 P G A 62 -6.854 14.353 124.300 1.00 30.58 P
ATOM 3 OP1 G A 62 -6.487 13.011 123.744 1.00 30.58 O
ATOM 4 OP2 G A 62 -8.294 14.766 124.320 1.00 30.58 O
ATOM 5 O5' G A 62 -6.212 14.547 125.730 1.00 30.58 O
ATOM 6 C5' G A 62 -4.798 14.663 125.878 1.00 30.58 C
ATOM 7 C4' G A 62 -4.325 13.643 126.839 1.00 30.58 C
ATOM 8 O4' G A 62 -4.700 14.081 128.176 1.00 30.58 O
ATOM 9 C3' G A 62 -5.009 12.290 126.655 1.00 30.58 C
ATOM 10 O3' G A 62 -4.191 11.268 127.209 1.00 30.58 O
ATOM 11 C2' G A 62 -6.249 12.465 127.508 1.00 30.58 C
ATOM 12 O2' G A 62 -6.908 11.270 127.850 1.00 30.58 O
ATOM 13 C1' G A 62 -5.634 13.163 128.715 1.00 30.58 C
ATOM 14 N9 G A 62 -6.580 13.892 129.548 1.00 30.02 N
ATOM 15 C8 G A 62 -7.883 14.194 129.265 1.00 30.02 C
ATOM 16 N7 G A 62 -8.484 14.830 130.236 1.00 30.02 N
ATOM 17 C5 G A 62 -7.507 14.939 131.209 1.00 30.02 C
ATOM 18 C6 G A 62 -7.592 15.545 132.470 1.00 30.02 C
ATOM 19 O6 G A 62 -8.586 16.102 132.954 1.00 30.02 O
ATOM 20 N1 G A 62 -6.366 15.440 133.138 1.00 30.02 N
ATOM 21 C2 G A 62 -5.220 14.829 132.661 1.00 30.02 C
ATOM 22 N2 G A 62 -4.150 14.833 133.478 1.00 30.02 N
ATOM 23 N3 G A 62 -5.139 14.258 131.473 1.00 30.02 N
ATOM 24 C4 G A 62 -6.317 14.357 130.812 1.00 30.02 C
ATOM 25 P A A 63 -3.294 10.352 126.259 1.00 40.34 P
ATOM 26 OP1 A A 63 -4.181 9.878 125.156 1.00 40.34 O
ATOM 27 OP2 A A 63 -2.625 9.352 127.143 1.00 40.34 O
ATOM 28 O5' A A 63 -2.208 11.365 125.685 1.00 40.34 O
TER

ATOM 1 O3' C B 65 2.307 13.857 135.098 1.00 33.07 O
ATOM 2 P G B 66 1.530 12.908 136.145 1.00 27.29 P
ATOM 3 OP1 G B 66 2.516 11.908 136.621 1.00 27.29 O
ATOM 4 OP2 G B 66 0.279 12.428 135.474 1.00 27.29 O
ATOM 5 O5' G B 66 1.162 13.909 137.335 1.00 27.29 O
ATOM 6 C5' G B 66 1.431 13.576 138.685 1.00 27.29 C
ATOM 7 C4' G B 66 0.433 14.200 139.636 1.00 27.29 C
ATOM 8 O4' G B 66 -0.138 15.433 139.093 1.00 27.29 O
ATOM 9 C3' G B 66 -0.798 13.392 139.938 1.00 27.29 C
ATOM 10 O3' G B 66 -0.547 12.275 140.747 1.00 27.29 O
ATOM 11 C2' G B 66 -1.682 14.451 140.582 1.00 27.29 C
ATOM 12 O2' G B 66 -1.161 14.849 141.841 1.00 27.29 O
ATOM 13 C1' G B 66 -1.462 15.594 139.609 1.00 27.29 C
ATOM 14 N9 G B 66 -2.447 15.542 138.495 1.00 27.16 N
ATOM 15 C8 G B 66 -2.409 14.761 137.357 1.00 27.16 C
ATOM 16 N7 G B 66 -3.436 14.922 136.554 1.00 27.16 N
ATOM 17 C5 G B 66 -4.241 15.845 137.204 1.00 27.16 C
ATOM 18 C6 G B 66 -5.499 16.402 136.825 1.00 27.16 C
ATOM 19 O6 G B 66 -6.177 16.195 135.820 1.00 27.16 O
ATOM 20 N1 G B 66 -5.968 17.300 137.764 1.00 27.16 N
ATOM 21 C2 G B 66 -5.303 17.623 138.919 1.00 27.16 C
ATOM 22 N2 G B 66 -5.893 18.517 139.718 1.00 27.16 N
ATOM 23 N3 G B 66 -4.135 17.114 139.283 1.00 27.16 N
ATOM 24 C4 G B 66 -3.651 16.224 138.396 1.00 27.16 C
ATOM 25 P G B 67 -1.591 11.063 140.771 1.00 28.29 P
ATOM 26 OP1 G B 67 -1.046 10.056 141.722 1.00 28.29 O
ATOM 27 OP2 G B 67 -1.827 10.663 139.363 1.00 28.29 O
ATOM 28 O5' G B 67 -2.917 11.738 141.378 1.00 28.29 O
TER

Atoms:
OP1: (-6.487,13.011,123.744)
OP2: (-8.294,14.766,124.320)
C3': (-5.009,12.290,126.655)
C1': (-5.634,13.163,128.715)
C5': (-4.798,14.663,125.878)
O6: (-8.586,16.102,132.954)
O4': (-4.700,14.081,128.176)
C8: (-7.883,14.194,129.265)
C2: (-5.220,14.829,132.661)
C6: (-7.592,15.545,132.470)
C5: (-7.507,14.939,131.209)
C4: (-6.317,14.357,130.812)
P: (-6.854,14.353,124.300)
C4': (-4.325,13.643,126.839)
C2': (-6.249,12.465,127.508)
O2': (-6.908,11.270,127.850)
N1: (-6.366,15.440,133.138)
N2: (-4.150,14.833,133.478)
N3: (-5.139,14.258,131.473)
N7: (-8.484,14.830,130.236)
N9: (-6.580,13.892,129.548)
O5': (-6.212,14.547,125.730)
O3': (-4.191,11.268,127.209)
OP1: (2.516,11.908,136.621)
OP2: (0.279,12.428,135.474)
C3': (-0.798,13.392,139.938)
C1': (-1.462,15.594,139.609)
C5': (1.431,13.576,138.685)
O6: (-6.177,16.195,135.820)
O4': (-0.138,15.433,139.093)
C8: (-2.409,14.761,137.357)
C2: (-5.303,17.623,138.919)
C6: (-5.499,16.402,136.825)
C5: (-4.241,15.845,137.204)
C4: (-3.651,16.224,138.396)
P: (1.530,12.908,136.145)
C4': (0.433,14.200,139.636)
C2': (-1.682,14.451,140.582)
O2': (-1.161,14.849,141.841)
N1: (-5.968,17.300,137.764)
N2: (-5.893,18.517,139.718)
N3: (-4.135,17.114,139.283)
N7: (-3.436,14.922,136.554)
N9: (-2.447,15.542,138.495)
O5': (1.162,13.909,137.335)
O3': (-0.547,12.275,140.747)
Image (generated by PyMOL):
PyMOL image
show in jmol