ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5704:5705

Extra

PDB:
ATOM 1 O3' C A 703 121.332 -71.001 223.317 1.00 54.42 O
ATOM 2 P G A 704 122.877 -71.364 223.509 1.00 57.36 P
ATOM 3 OP1 G A 704 123.243 -72.171 222.333 1.00 57.87 O
ATOM 4 OP2 G A 704 123.043 -71.953 224.873 1.00 57.34 O
ATOM 5 O5' G A 704 123.601 -69.957 223.431 1.00 56.72 O
ATOM 6 C5' G A 704 123.897 -69.387 222.170 1.00 56.68 C
ATOM 7 C4' G A 704 124.656 -68.093 222.297 1.00 56.06 C
ATOM 8 O4' G A 704 123.923 -67.166 223.131 1.00 55.62 O
ATOM 9 C3' G A 704 126.009 -68.172 222.966 1.00 55.81 C
ATOM 10 O3' G A 704 127.024 -68.723 222.134 1.00 56.08 O
ATOM 11 C2' G A 704 126.237 -66.722 223.392 1.00 55.14 C
ATOM 12 O2' G A 704 126.616 -65.919 222.291 1.00 54.99 O
ATOM 13 C1' G A 704 124.823 -66.327 223.819 1.00 55.07 C
ATOM 14 N9 G A 704 124.638 -66.544 225.248 1.00 54.92 N
ATOM 15 C8 G A 704 123.984 -67.555 225.889 1.00 55.28 C
ATOM 16 N7 G A 704 124.076 -67.466 227.180 1.00 55.02 N
ATOM 17 C5 G A 704 124.845 -66.320 227.373 1.00 54.46 C
ATOM 18 C6 G A 704 125.305 -65.669 228.548 1.00 53.97 C
ATOM 19 O6 G A 704 125.123 -65.994 229.725 1.00 53.94 O
ATOM 20 N1 G A 704 126.045 -64.533 228.256 1.00 53.50 N
ATOM 21 C2 G A 704 126.321 -64.052 226.995 1.00 53.49 C
ATOM 22 N2 G A 704 127.059 -62.932 226.863 1.00 53.02 N
ATOM 23 N3 G A 704 125.907 -64.663 225.912 1.00 53.94 N
ATOM 24 C4 G A 704 125.194 -65.764 226.182 1.00 54.40 C
ATOM 25 P A A 705 128.357 -69.308 222.803 1.00 50.48 P
ATOM 26 OP1 A A 705 129.265 -69.693 221.719 1.00 50.76 O
ATOM 27 OP2 A A 705 127.968 -70.303 223.789 1.00 50.74 O
ATOM 28 O5' A A 705 128.931 -68.044 223.541 1.00 49.79 O
TER

ATOM 1 O3' G B 704 127.024 -68.723 222.134 1.00 56.08 O
ATOM 2 P A B 705 128.357 -69.308 222.803 1.00 50.48 P
ATOM 3 OP1 A B 705 129.265 -69.693 221.719 1.00 50.76 O
ATOM 4 OP2 A B 705 127.968 -70.303 223.789 1.00 50.74 O
ATOM 5 O5' A B 705 128.931 -68.044 223.541 1.00 49.79 O
ATOM 6 C5' A B 705 129.718 -67.109 222.845 1.00 49.47 C
ATOM 7 C4' A B 705 130.370 -66.172 223.798 1.00 48.88 C
ATOM 8 O4' A B 705 129.379 -65.638 224.710 1.00 48.60 O
ATOM 9 C3' A B 705 131.414 -66.775 224.722 1.00 48.85 C
ATOM 10 O3' A B 705 132.649 -66.948 224.075 1.00 48.94 O
ATOM 11 C2' A B 705 131.471 -65.737 225.818 1.00 48.26 C
ATOM 12 O2' A B 705 132.146 -64.595 225.326 1.00 47.85 O
ATOM 13 C1' A B 705 129.987 -65.374 225.956 1.00 48.22 C
ATOM 14 N9 A B 705 129.292 -66.167 226.988 1.00 48.42 N
ATOM 15 C8 A B 705 128.297 -67.090 226.801 1.00 48.91 C
ATOM 16 N7 A B 705 127.844 -67.629 227.922 1.00 48.98 N
ATOM 17 C5 A B 705 128.566 -66.986 228.903 1.00 48.51 C
ATOM 18 C6 A B 705 128.586 -67.108 230.285 1.00 48.35 C
ATOM 19 N6 A B 705 127.841 -67.910 231.019 1.00 48.63 N
ATOM 20 N1 A B 705 129.438 -66.352 230.939 1.00 47.88 N
ATOM 21 C2 A B 705 130.223 -65.538 230.254 1.00 47.59 C
ATOM 22 N3 A B 705 130.310 -65.333 228.966 1.00 47.70 N
ATOM 23 C4 A B 705 129.441 -66.093 228.338 1.00 48.16 C
ATOM 24 P U B 706 133.472 -68.305 224.235 1.00 54.83 P
ATOM 25 OP1 U B 706 134.638 -68.202 223.322 1.00 54.87 O
ATOM 26 OP2 U B 706 132.512 -69.433 224.061 1.00 55.38 O
ATOM 27 O5' U B 706 133.963 -68.235 225.743 1.00 54.50 O
TER

Atoms:
OP1: (123.243,-72.171,222.333)
OP2: (123.043,-71.953,224.873)
C3': (126.009,-68.172,222.966)
C1': (124.823,-66.327,223.819)
C5': (123.897,-69.387,222.170)
O6: (125.123,-65.994,229.725)
O4': (123.923,-67.166,223.131)
C8: (123.984,-67.555,225.889)
C2: (126.321,-64.052,226.995)
C6: (125.305,-65.669,228.548)
C5: (124.845,-66.320,227.373)
C4: (125.194,-65.764,226.182)
P: (122.877,-71.364,223.509)
C4': (124.656,-68.093,222.297)
C2': (126.237,-66.722,223.392)
O2': (126.616,-65.919,222.291)
N1: (126.045,-64.533,228.256)
N2: (127.059,-62.932,226.863)
N3: (125.907,-64.663,225.912)
N7: (124.076,-67.466,227.180)
N9: (124.638,-66.544,225.248)
O5': (123.601,-69.957,223.431)
O3': (127.024,-68.723,222.134)
OP1: (129.265,-69.693,221.719)
OP2: (127.968,-70.303,223.789)
C3': (131.414,-66.775,224.722)
C1': (129.987,-65.374,225.956)
C5': (129.718,-67.109,222.845)
O4': (129.379,-65.638,224.710)
C8: (128.297,-67.090,226.801)
O2': (132.146,-64.595,225.326)
C6: (128.586,-67.108,230.285)
C5: (128.566,-66.986,228.903)
C4: (129.441,-66.093,228.338)
P: (128.357,-69.308,222.803)
C4': (130.370,-66.172,223.798)
C2': (131.471,-65.737,225.818)
C2: (130.223,-65.538,230.254)
N1: (129.438,-66.352,230.939)
N3: (130.310,-65.333,228.966)
N6: (127.841,-67.910,231.019)
N7: (127.844,-67.629,227.922)
N9: (129.292,-66.167,226.988)
O5': (128.931,-68.044,223.541)
O3': (132.649,-66.948,224.075)
Image (generated by PyMOL):
PyMOL image
show in jmol