Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0219:0220
Extra
PDB:
ATOM 1 O3' C A 218 53.494 91.345 23.362 1.00 34.84 O
ATOM 2 P G A 219 53.033 92.461 22.312 1.00 35.86 P
ATOM 3 OP1 G A 219 52.312 91.753 21.235 1.00 38.64 O
ATOM 4 OP2 G A 219 54.199 93.304 21.976 1.00 38.11 O
ATOM 5 O5' G A 219 51.988 93.342 23.121 1.00 32.57 O
ATOM 6 C5' G A 219 50.793 92.758 23.643 1.00 30.84 C
ATOM 7 C4' G A 219 50.027 93.780 24.435 1.00 30.54 C
ATOM 8 O4' G A 219 50.726 94.096 25.663 1.00 30.81 O
ATOM 9 C3' G A 219 49.880 95.109 23.736 1.00 29.38 C
ATOM 10 O3' G A 219 48.823 95.063 22.807 1.00 31.15 O
ATOM 11 C2' G A 219 49.648 96.067 24.893 1.00 30.44 C
ATOM 12 O2' G A 219 48.326 96.033 25.387 1.00 29.63 O
ATOM 13 C1' G A 219 50.582 95.477 25.948 1.00 31.49 C
ATOM 14 N9 G A 219 51.915 96.071 25.972 1.00 33.41 N
ATOM 15 C8 G A 219 53.075 95.521 25.479 1.00 33.90 C
ATOM 16 N7 G A 219 54.127 96.259 25.703 1.00 35.62 N
ATOM 17 C5 G A 219 53.630 97.370 26.372 1.00 36.11 C
ATOM 18 C6 G A 219 54.302 98.513 26.887 1.00 36.55 C
ATOM 19 O6 G A 219 55.512 98.774 26.861 1.00 36.23 O
ATOM 20 N1 G A 219 53.413 99.399 27.486 1.00 35.29 N
ATOM 21 C2 G A 219 52.057 99.213 27.576 1.00 34.50 C
ATOM 22 N2 G A 219 51.367 100.187 28.172 1.00 36.10 N
ATOM 23 N3 G A 219 51.423 98.153 27.112 1.00 33.78 N
ATOM 24 C4 G A 219 52.264 97.278 26.527 1.00 34.30 C
ATOM 25 P A A 220 48.734 96.178 21.665 1.00 34.78 P
ATOM 26 OP1 A A 220 47.463 95.972 20.924 1.00 32.97 O
ATOM 27 OP2 A A 220 50.025 96.198 20.930 1.00 31.67 O
ATOM 28 O5' A A 220 48.592 97.516 22.512 1.00 33.41 O
TER
ATOM 1 O3' G B 219 48.823 95.063 22.807 1.00 31.15 O
ATOM 2 P A B 220 48.734 96.178 21.665 1.00 34.78 P
ATOM 3 OP1 A B 220 47.463 95.972 20.924 1.00 32.97 O
ATOM 4 OP2 A B 220 50.025 96.198 20.930 1.00 31.67 O
ATOM 5 O5' A B 220 48.592 97.516 22.512 1.00 33.41 O
ATOM 6 C5' A B 220 48.958 98.773 21.964 1.00 31.48 C
ATOM 7 C4' A B 220 48.977 99.810 23.044 1.00 30.36 C
ATOM 8 O4' A B 220 49.947 99.443 24.056 1.00 31.76 O
ATOM 9 C3' A B 220 49.443 101.166 22.572 1.00 30.62 C
ATOM 10 O3' A B 220 48.375 101.854 21.944 1.00 31.48 O
ATOM 11 C2' A B 220 49.923 101.804 23.866 1.00 29.91 C
ATOM 12 O2' A B 220 48.847 102.242 24.666 1.00 29.03 O
ATOM 13 C1' A B 220 50.590 100.608 24.548 1.00 29.66 C
ATOM 14 N9 A B 220 52.032 100.475 24.307 1.00 29.42 N
ATOM 15 C8 A B 220 52.685 99.476 23.628 1.00 28.80 C
ATOM 16 N7 A B 220 53.989 99.601 23.626 1.00 28.06 N
ATOM 17 C5 A B 220 54.213 100.766 24.344 1.00 29.29 C
ATOM 18 C6 A B 220 55.394 101.446 24.709 1.00 29.50 C
ATOM 19 N6 A B 220 56.623 101.023 24.409 1.00 31.30 N
ATOM 20 N1 A B 220 55.268 102.587 25.407 1.00 29.28 N
ATOM 21 C2 A B 220 54.040 103.011 25.721 1.00 31.67 C
ATOM 22 N3 A B 220 52.860 102.460 25.452 1.00 31.76 N
ATOM 23 C4 A B 220 53.016 101.325 24.753 1.00 30.09 C
ATOM 24 P U B 221 48.655 102.695 20.609 1.00 31.27 P
ATOM 25 OP1 U B 221 47.328 103.138 20.122 1.00 30.49 O
ATOM 26 OP2 U B 221 49.564 101.945 19.706 1.00 28.41 O
ATOM 27 O5' U B 221 49.443 103.962 21.146 1.00 30.75 O
TER
ATOM 2 P G A 219 53.033 92.461 22.312 1.00 35.86 P
ATOM 3 OP1 G A 219 52.312 91.753 21.235 1.00 38.64 O
ATOM 4 OP2 G A 219 54.199 93.304 21.976 1.00 38.11 O
ATOM 5 O5' G A 219 51.988 93.342 23.121 1.00 32.57 O
ATOM 6 C5' G A 219 50.793 92.758 23.643 1.00 30.84 C
ATOM 7 C4' G A 219 50.027 93.780 24.435 1.00 30.54 C
ATOM 8 O4' G A 219 50.726 94.096 25.663 1.00 30.81 O
ATOM 9 C3' G A 219 49.880 95.109 23.736 1.00 29.38 C
ATOM 10 O3' G A 219 48.823 95.063 22.807 1.00 31.15 O
ATOM 11 C2' G A 219 49.648 96.067 24.893 1.00 30.44 C
ATOM 12 O2' G A 219 48.326 96.033 25.387 1.00 29.63 O
ATOM 13 C1' G A 219 50.582 95.477 25.948 1.00 31.49 C
ATOM 14 N9 G A 219 51.915 96.071 25.972 1.00 33.41 N
ATOM 15 C8 G A 219 53.075 95.521 25.479 1.00 33.90 C
ATOM 16 N7 G A 219 54.127 96.259 25.703 1.00 35.62 N
ATOM 17 C5 G A 219 53.630 97.370 26.372 1.00 36.11 C
ATOM 18 C6 G A 219 54.302 98.513 26.887 1.00 36.55 C
ATOM 19 O6 G A 219 55.512 98.774 26.861 1.00 36.23 O
ATOM 20 N1 G A 219 53.413 99.399 27.486 1.00 35.29 N
ATOM 21 C2 G A 219 52.057 99.213 27.576 1.00 34.50 C
ATOM 22 N2 G A 219 51.367 100.187 28.172 1.00 36.10 N
ATOM 23 N3 G A 219 51.423 98.153 27.112 1.00 33.78 N
ATOM 24 C4 G A 219 52.264 97.278 26.527 1.00 34.30 C
ATOM 25 P A A 220 48.734 96.178 21.665 1.00 34.78 P
ATOM 26 OP1 A A 220 47.463 95.972 20.924 1.00 32.97 O
ATOM 27 OP2 A A 220 50.025 96.198 20.930 1.00 31.67 O
ATOM 28 O5' A A 220 48.592 97.516 22.512 1.00 33.41 O
TER
ATOM 1 O3' G B 219 48.823 95.063 22.807 1.00 31.15 O
ATOM 2 P A B 220 48.734 96.178 21.665 1.00 34.78 P
ATOM 3 OP1 A B 220 47.463 95.972 20.924 1.00 32.97 O
ATOM 4 OP2 A B 220 50.025 96.198 20.930 1.00 31.67 O
ATOM 5 O5' A B 220 48.592 97.516 22.512 1.00 33.41 O
ATOM 6 C5' A B 220 48.958 98.773 21.964 1.00 31.48 C
ATOM 7 C4' A B 220 48.977 99.810 23.044 1.00 30.36 C
ATOM 8 O4' A B 220 49.947 99.443 24.056 1.00 31.76 O
ATOM 9 C3' A B 220 49.443 101.166 22.572 1.00 30.62 C
ATOM 10 O3' A B 220 48.375 101.854 21.944 1.00 31.48 O
ATOM 11 C2' A B 220 49.923 101.804 23.866 1.00 29.91 C
ATOM 12 O2' A B 220 48.847 102.242 24.666 1.00 29.03 O
ATOM 13 C1' A B 220 50.590 100.608 24.548 1.00 29.66 C
ATOM 14 N9 A B 220 52.032 100.475 24.307 1.00 29.42 N
ATOM 15 C8 A B 220 52.685 99.476 23.628 1.00 28.80 C
ATOM 16 N7 A B 220 53.989 99.601 23.626 1.00 28.06 N
ATOM 17 C5 A B 220 54.213 100.766 24.344 1.00 29.29 C
ATOM 18 C6 A B 220 55.394 101.446 24.709 1.00 29.50 C
ATOM 19 N6 A B 220 56.623 101.023 24.409 1.00 31.30 N
ATOM 20 N1 A B 220 55.268 102.587 25.407 1.00 29.28 N
ATOM 21 C2 A B 220 54.040 103.011 25.721 1.00 31.67 C
ATOM 22 N3 A B 220 52.860 102.460 25.452 1.00 31.76 N
ATOM 23 C4 A B 220 53.016 101.325 24.753 1.00 30.09 C
ATOM 24 P U B 221 48.655 102.695 20.609 1.00 31.27 P
ATOM 25 OP1 U B 221 47.328 103.138 20.122 1.00 30.49 O
ATOM 26 OP2 U B 221 49.564 101.945 19.706 1.00 28.41 O
ATOM 27 O5' U B 221 49.443 103.962 21.146 1.00 30.75 O
TER
Atoms:
OP1: (52.312,91.753,21.235)
OP2: (54.199,93.304,21.976)
C3': (49.880,95.109,23.736)
C1': (50.582,95.477,25.948)
C5': (50.793,92.758,23.643)
O6: (55.512,98.774,26.861)
O4': (50.726,94.096,25.663)
C8: (53.075,95.521,25.479)
C2: (52.057,99.213,27.576)
C6: (54.302,98.513,26.887)
C5: (53.630,97.370,26.372)
C4: (52.264,97.278,26.527)
P: (53.033,92.461,22.312)
C4': (50.027,93.780,24.435)
C2': (49.648,96.067,24.893)
O2': (48.326,96.033,25.387)
N1: (53.413,99.399,27.486)
N2: (51.367,100.187,28.172)
N3: (51.423,98.153,27.112)
N7: (54.127,96.259,25.703)
N9: (51.915,96.071,25.972)
O5': (51.988,93.342,23.121)
O3': (48.823,95.063,22.807)
OP2: (54.199,93.304,21.976)
C3': (49.880,95.109,23.736)
C1': (50.582,95.477,25.948)
C5': (50.793,92.758,23.643)
O6: (55.512,98.774,26.861)
O4': (50.726,94.096,25.663)
C8: (53.075,95.521,25.479)
C2: (52.057,99.213,27.576)
C6: (54.302,98.513,26.887)
C5: (53.630,97.370,26.372)
C4: (52.264,97.278,26.527)
P: (53.033,92.461,22.312)
C4': (50.027,93.780,24.435)
C2': (49.648,96.067,24.893)
O2': (48.326,96.033,25.387)
N1: (53.413,99.399,27.486)
N2: (51.367,100.187,28.172)
N3: (51.423,98.153,27.112)
N7: (54.127,96.259,25.703)
N9: (51.915,96.071,25.972)
O5': (51.988,93.342,23.121)
O3': (48.823,95.063,22.807)
OP1: (47.463,95.972,20.924)
OP2: (50.025,96.198,20.930)
C3': (49.443,101.166,22.572)
C1': (50.590,100.608,24.548)
C5': (48.958,98.773,21.964)
O4': (49.947,99.443,24.056)
C8: (52.685,99.476,23.628)
O2': (48.847,102.242,24.666)
C6: (55.394,101.446,24.709)
C5: (54.213,100.766,24.344)
C4: (53.016,101.325,24.753)
P: (48.734,96.178,21.665)
C4': (48.977,99.810,23.044)
C2': (49.923,101.804,23.866)
C2: (54.040,103.011,25.721)
N1: (55.268,102.587,25.407)
N3: (52.860,102.460,25.452)
N6: (56.623,101.023,24.409)
N7: (53.989,99.601,23.626)
N9: (52.032,100.475,24.307)
O5': (48.592,97.516,22.512)
O3': (48.375,101.854,21.944)
OP2: (50.025,96.198,20.930)
C3': (49.443,101.166,22.572)
C1': (50.590,100.608,24.548)
C5': (48.958,98.773,21.964)
O4': (49.947,99.443,24.056)
C8: (52.685,99.476,23.628)
O2': (48.847,102.242,24.666)
C6: (55.394,101.446,24.709)
C5: (54.213,100.766,24.344)
C4: (53.016,101.325,24.753)
P: (48.734,96.178,21.665)
C4': (48.977,99.810,23.044)
C2': (49.923,101.804,23.866)
C2: (54.040,103.011,25.721)
N1: (55.268,102.587,25.407)
N3: (52.860,102.460,25.452)
N6: (56.623,101.023,24.409)
N7: (53.989,99.601,23.626)
N9: (52.032,100.475,24.307)
O5': (48.592,97.516,22.512)
O3': (48.375,101.854,21.944)
Image (generated by PyMOL):