Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:B106:B13
Extra
PDB:
ATOM 1 O3' G A 105 -117.329 127.114 180.604 1.00 90.13 O
ATOM 2 P G A 106 -118.142 127.884 179.446 1.00105.47 P
ATOM 3 OP1 G A 106 -119.502 128.160 179.981 1.00 78.54 O
ATOM 4 OP2 G A 106 -117.991 127.141 178.170 1.00 78.52 O
ATOM 5 O5' G A 106 -117.379 129.271 179.290 1.00 88.86 O
ATOM 6 C5' G A 106 -117.207 130.148 180.421 1.00 88.86 C
ATOM 7 C4' G A 106 -116.440 131.384 180.014 1.00 88.86 C
ATOM 8 O4' G A 106 -115.127 131.002 179.527 1.00 88.86 O
ATOM 9 C3' G A 106 -117.059 132.179 178.878 1.00 88.86 C
ATOM 10 O3' G A 106 -118.033 133.094 179.361 1.00 88.86 O
ATOM 11 C2' G A 106 -115.857 132.887 178.266 1.00 88.86 C
ATOM 12 O2' G A 106 -115.515 134.060 178.973 1.00 88.86 O
ATOM 13 C1' G A 106 -114.749 131.850 178.457 1.00 88.86 C
ATOM 14 N9 G A 106 -114.507 131.025 177.275 1.00 54.02 N
ATOM 15 C8 G A 106 -114.722 129.673 177.148 1.00 53.99 C
ATOM 16 N7 G A 106 -114.389 129.210 175.974 1.00 53.96 N
ATOM 17 C5 G A 106 -113.938 130.325 175.279 1.00 53.95 C
ATOM 18 C6 G A 106 -113.459 130.446 173.956 1.00 53.98 C
ATOM 19 O6 G A 106 -113.330 129.569 173.104 1.00 53.99 O
ATOM 20 N1 G A 106 -113.116 131.752 173.653 1.00 54.01 N
ATOM 21 C2 G A 106 -113.220 132.810 174.512 1.00 53.99 C
ATOM 22 N2 G A 106 -112.832 133.993 174.031 1.00 53.99 N
ATOM 23 N3 G A 106 -113.667 132.716 175.748 1.00 53.94 N
ATOM 24 C4 G A 106 -114.007 131.453 176.064 1.00 53.95 C
ATOM 25 P U A 107 -119.282 133.485 178.431 1.00 88.89 P
ATOM 26 OP1 U A 107 -120.056 134.534 179.148 1.00 60.08 O
ATOM 27 OP2 U A 107 -119.962 132.230 177.999 1.00 60.05 O
ATOM 28 O5' U A 107 -118.607 134.154 177.152 1.00 74.80 O
TER
ATOM 1 O3' A B 12 -110.049 140.174 172.015 1.00 55.72 O
ATOM 2 P U B 13 -109.297 139.374 173.182 1.00 44.71 P
ATOM 3 OP1 U B 13 -109.072 140.329 174.301 1.00 71.39 O
ATOM 4 OP2 U B 13 -108.140 138.636 172.597 1.00 71.33 O
ATOM 5 O5' U B 13 -110.398 138.320 173.648 1.00 48.33 O
ATOM 6 C5' U B 13 -110.786 137.233 172.785 1.00 48.33 C
ATOM 7 C4' U B 13 -112.274 137.001 172.866 1.00 48.33 C
ATOM 8 O4' U B 13 -112.633 136.782 174.253 1.00 48.33 O
ATOM 9 C3' U B 13 -113.174 138.120 172.359 1.00 48.33 C
ATOM 10 O3' U B 13 -114.282 137.490 171.734 1.00 48.33 O
ATOM 11 C2' U B 13 -113.591 138.847 173.639 1.00 48.33 C
ATOM 12 O2' U B 13 -114.849 139.477 173.541 1.00 48.33 O
ATOM 13 C1' U B 13 -113.640 137.696 174.646 1.00 48.33 C
ATOM 14 N1 U B 13 -113.402 138.036 176.060 1.00105.90 N
ATOM 15 C2 U B 13 -113.315 136.978 176.965 1.00105.87 C
ATOM 16 O2 U B 13 -113.442 135.807 176.641 1.00105.87 O
ATOM 17 N3 U B 13 -113.071 137.342 178.265 1.00105.89 N
ATOM 18 C4 U B 13 -112.912 138.617 178.754 1.00105.93 C
ATOM 19 O4 U B 13 -112.663 138.778 179.952 1.00105.94 O
ATOM 20 C5 U B 13 -113.027 139.654 177.768 1.00105.90 C
ATOM 21 C6 U B 13 -113.263 139.337 176.488 1.00105.87 C
ATOM 22 P A B 14 -115.097 138.254 170.590 1.00 63.57 P
ATOM 23 OP1 A B 14 -116.043 139.163 171.280 1.00 58.05 O
ATOM 24 OP2 A B 14 -115.604 137.243 169.627 1.00 58.06 O
ATOM 25 O5' A B 14 -114.025 139.164 169.841 1.00 76.10 O
TER
ATOM 2 P G A 106 -118.142 127.884 179.446 1.00105.47 P
ATOM 3 OP1 G A 106 -119.502 128.160 179.981 1.00 78.54 O
ATOM 4 OP2 G A 106 -117.991 127.141 178.170 1.00 78.52 O
ATOM 5 O5' G A 106 -117.379 129.271 179.290 1.00 88.86 O
ATOM 6 C5' G A 106 -117.207 130.148 180.421 1.00 88.86 C
ATOM 7 C4' G A 106 -116.440 131.384 180.014 1.00 88.86 C
ATOM 8 O4' G A 106 -115.127 131.002 179.527 1.00 88.86 O
ATOM 9 C3' G A 106 -117.059 132.179 178.878 1.00 88.86 C
ATOM 10 O3' G A 106 -118.033 133.094 179.361 1.00 88.86 O
ATOM 11 C2' G A 106 -115.857 132.887 178.266 1.00 88.86 C
ATOM 12 O2' G A 106 -115.515 134.060 178.973 1.00 88.86 O
ATOM 13 C1' G A 106 -114.749 131.850 178.457 1.00 88.86 C
ATOM 14 N9 G A 106 -114.507 131.025 177.275 1.00 54.02 N
ATOM 15 C8 G A 106 -114.722 129.673 177.148 1.00 53.99 C
ATOM 16 N7 G A 106 -114.389 129.210 175.974 1.00 53.96 N
ATOM 17 C5 G A 106 -113.938 130.325 175.279 1.00 53.95 C
ATOM 18 C6 G A 106 -113.459 130.446 173.956 1.00 53.98 C
ATOM 19 O6 G A 106 -113.330 129.569 173.104 1.00 53.99 O
ATOM 20 N1 G A 106 -113.116 131.752 173.653 1.00 54.01 N
ATOM 21 C2 G A 106 -113.220 132.810 174.512 1.00 53.99 C
ATOM 22 N2 G A 106 -112.832 133.993 174.031 1.00 53.99 N
ATOM 23 N3 G A 106 -113.667 132.716 175.748 1.00 53.94 N
ATOM 24 C4 G A 106 -114.007 131.453 176.064 1.00 53.95 C
ATOM 25 P U A 107 -119.282 133.485 178.431 1.00 88.89 P
ATOM 26 OP1 U A 107 -120.056 134.534 179.148 1.00 60.08 O
ATOM 27 OP2 U A 107 -119.962 132.230 177.999 1.00 60.05 O
ATOM 28 O5' U A 107 -118.607 134.154 177.152 1.00 74.80 O
TER
ATOM 1 O3' A B 12 -110.049 140.174 172.015 1.00 55.72 O
ATOM 2 P U B 13 -109.297 139.374 173.182 1.00 44.71 P
ATOM 3 OP1 U B 13 -109.072 140.329 174.301 1.00 71.39 O
ATOM 4 OP2 U B 13 -108.140 138.636 172.597 1.00 71.33 O
ATOM 5 O5' U B 13 -110.398 138.320 173.648 1.00 48.33 O
ATOM 6 C5' U B 13 -110.786 137.233 172.785 1.00 48.33 C
ATOM 7 C4' U B 13 -112.274 137.001 172.866 1.00 48.33 C
ATOM 8 O4' U B 13 -112.633 136.782 174.253 1.00 48.33 O
ATOM 9 C3' U B 13 -113.174 138.120 172.359 1.00 48.33 C
ATOM 10 O3' U B 13 -114.282 137.490 171.734 1.00 48.33 O
ATOM 11 C2' U B 13 -113.591 138.847 173.639 1.00 48.33 C
ATOM 12 O2' U B 13 -114.849 139.477 173.541 1.00 48.33 O
ATOM 13 C1' U B 13 -113.640 137.696 174.646 1.00 48.33 C
ATOM 14 N1 U B 13 -113.402 138.036 176.060 1.00105.90 N
ATOM 15 C2 U B 13 -113.315 136.978 176.965 1.00105.87 C
ATOM 16 O2 U B 13 -113.442 135.807 176.641 1.00105.87 O
ATOM 17 N3 U B 13 -113.071 137.342 178.265 1.00105.89 N
ATOM 18 C4 U B 13 -112.912 138.617 178.754 1.00105.93 C
ATOM 19 O4 U B 13 -112.663 138.778 179.952 1.00105.94 O
ATOM 20 C5 U B 13 -113.027 139.654 177.768 1.00105.90 C
ATOM 21 C6 U B 13 -113.263 139.337 176.488 1.00105.87 C
ATOM 22 P A B 14 -115.097 138.254 170.590 1.00 63.57 P
ATOM 23 OP1 A B 14 -116.043 139.163 171.280 1.00 58.05 O
ATOM 24 OP2 A B 14 -115.604 137.243 169.627 1.00 58.06 O
ATOM 25 O5' A B 14 -114.025 139.164 169.841 1.00 76.10 O
TER
Atoms:
OP1: (-119.502,128.160,179.981)
OP2: (-117.991,127.141,178.170)
C3': (-117.059,132.179,178.878)
C1': (-114.749,131.850,178.457)
C5': (-117.207,130.148,180.421)
O6: (-113.330,129.569,173.104)
O4': (-115.127,131.002,179.527)
C8: (-114.722,129.673,177.148)
C2: (-113.220,132.810,174.512)
C6: (-113.459,130.446,173.956)
C5: (-113.938,130.325,175.279)
C4: (-114.007,131.453,176.064)
P: (-118.142,127.884,179.446)
C4': (-116.440,131.384,180.014)
C2': (-115.857,132.887,178.266)
O2': (-115.515,134.060,178.973)
N1: (-113.116,131.752,173.653)
N2: (-112.832,133.993,174.031)
N3: (-113.667,132.716,175.748)
N7: (-114.389,129.210,175.974)
N9: (-114.507,131.025,177.275)
O5': (-117.379,129.271,179.290)
O3': (-118.033,133.094,179.361)
OP2: (-117.991,127.141,178.170)
C3': (-117.059,132.179,178.878)
C1': (-114.749,131.850,178.457)
C5': (-117.207,130.148,180.421)
O6: (-113.330,129.569,173.104)
O4': (-115.127,131.002,179.527)
C8: (-114.722,129.673,177.148)
C2: (-113.220,132.810,174.512)
C6: (-113.459,130.446,173.956)
C5: (-113.938,130.325,175.279)
C4: (-114.007,131.453,176.064)
P: (-118.142,127.884,179.446)
C4': (-116.440,131.384,180.014)
C2': (-115.857,132.887,178.266)
O2': (-115.515,134.060,178.973)
N1: (-113.116,131.752,173.653)
N2: (-112.832,133.993,174.031)
N3: (-113.667,132.716,175.748)
N7: (-114.389,129.210,175.974)
N9: (-114.507,131.025,177.275)
O5': (-117.379,129.271,179.290)
O3': (-118.033,133.094,179.361)
C4: (-112.912,138.617,178.754)
N3: (-113.071,137.342,178.265)
OP1: (-109.072,140.329,174.301)
OP2: (-108.140,138.636,172.597)
C2: (-113.315,136.978,176.965)
C1': (-113.640,137.696,174.646)
C3': (-113.174,138.120,172.359)
O5': (-110.398,138.320,173.648)
O4': (-112.633,136.782,174.253)
C5': (-110.786,137.233,172.785)
P: (-109.297,139.374,173.182)
C4': (-112.274,137.001,172.866)
C2': (-113.591,138.847,173.639)
O2': (-114.849,139.477,173.541)
N1: (-113.402,138.036,176.060)
O4: (-112.663,138.778,179.952)
O2: (-113.442,135.807,176.641)
C6: (-113.263,139.337,176.488)
C5: (-113.027,139.654,177.768)
O3': (-114.282,137.490,171.734)
N3: (-113.071,137.342,178.265)
OP1: (-109.072,140.329,174.301)
OP2: (-108.140,138.636,172.597)
C2: (-113.315,136.978,176.965)
C1': (-113.640,137.696,174.646)
C3': (-113.174,138.120,172.359)
O5': (-110.398,138.320,173.648)
O4': (-112.633,136.782,174.253)
C5': (-110.786,137.233,172.785)
P: (-109.297,139.374,173.182)
C4': (-112.274,137.001,172.866)
C2': (-113.591,138.847,173.639)
O2': (-114.849,139.477,173.541)
N1: (-113.402,138.036,176.060)
O4: (-112.663,138.778,179.952)
O2: (-113.442,135.807,176.641)
C6: (-113.263,139.337,176.488)
C5: (-113.027,139.654,177.768)
O3': (-114.282,137.490,171.734)
Image (generated by PyMOL):