Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1248:A1352
Extra
PDB:
ATOM 1 O3' C A1247 -100.831 127.582 35.816 1.00 71.65 O
ATOM 2 P A A1248 -101.172 126.022 35.887 1.00 70.23 P
ATOM 3 OP1 A A1248 -100.329 125.347 34.863 1.00 70.23 O
ATOM 4 OP2 A A1248 -102.654 125.890 35.809 1.00 70.23 O
ATOM 5 O5' A A1248 -100.676 125.621 37.341 1.00 70.23 O
ATOM 6 C5' A A1248 -100.532 124.260 37.700 1.00 70.23 C
ATOM 7 C4' A A1248 -99.100 123.928 38.009 1.00 70.23 C
ATOM 8 O4' A A1248 -98.783 124.349 39.364 1.00 70.23 O
ATOM 9 C3' A A1248 -98.754 122.452 37.950 1.00 70.23 C
ATOM 10 O3' A A1248 -98.362 122.050 36.650 1.00 70.23 O
ATOM 11 C2' A A1248 -97.654 122.296 38.993 1.00 70.23 C
ATOM 12 O2' A A1248 -96.389 122.629 38.437 1.00 70.23 O
ATOM 13 C1' A A1248 -98.038 123.358 40.026 1.00 70.23 C
ATOM 14 N9 A A1248 -98.872 122.827 41.136 1.00 70.09 N
ATOM 15 C8 A A1248 -100.199 123.165 41.308 1.00 70.09 C
ATOM 16 N7 A A1248 -100.773 122.638 42.368 1.00 70.09 N
ATOM 17 C5 A A1248 -99.761 121.908 42.972 1.00 70.09 C
ATOM 18 C6 A A1248 -99.755 121.123 44.141 1.00 70.09 C
ATOM 19 N6 A A1248 -100.815 120.943 44.918 1.00 70.09 N
ATOM 20 N1 A A1248 -98.609 120.522 44.487 1.00 70.09 N
ATOM 21 C2 A A1248 -97.542 120.711 43.703 1.00 70.09 C
ATOM 22 N3 A A1248 -97.422 121.426 42.581 1.00 70.09 N
ATOM 23 C4 A A1248 -98.579 122.022 42.241 1.00 70.09 C
ATOM 24 P A A1249 -98.424 120.501 36.231 1.00 67.94 P
ATOM 25 OP1 A A1249 -97.715 120.365 34.927 1.00 67.94 O
ATOM 26 OP2 A A1249 -99.847 120.082 36.325 1.00 67.94 O
ATOM 27 O5' A A1249 -97.580 119.798 37.375 1.00 67.94 O
TER
ATOM 1 O3' G B1351 -101.941 122.530 51.134 1.00 52.35 O
ATOM 2 P U B1352 -102.603 121.120 51.452 1.00 50.52 P
ATOM 3 OP1 U B1352 -104.067 121.295 51.340 1.00 50.52 O
ATOM 4 OP2 U B1352 -102.037 120.653 52.741 1.00 50.52 O
ATOM 5 O5' U B1352 -102.065 120.210 50.259 1.00 50.52 O
ATOM 6 C5' U B1352 -102.552 120.385 48.939 1.00 50.52 C
ATOM 7 C4' U B1352 -102.117 119.263 48.031 1.00 50.52 C
ATOM 8 O4' U B1352 -100.730 119.448 47.647 1.00 50.52 O
ATOM 9 C3' U B1352 -102.163 117.856 48.622 1.00 50.52 C
ATOM 10 O3' U B1352 -103.466 117.285 48.594 1.00 50.52 O
ATOM 11 C2' U B1352 -101.154 117.108 47.761 1.00 50.52 C
ATOM 12 O2' U B1352 -101.731 116.742 46.515 1.00 50.52 O
ATOM 13 C1' U B1352 -100.098 118.191 47.510 1.00 50.52 C
ATOM 14 N1 U B1352 -98.969 118.126 48.478 1.00 50.68 N
ATOM 15 C2 U B1352 -97.885 117.282 48.234 1.00 50.68 C
ATOM 16 O2 U B1352 -97.792 116.537 47.264 1.00 50.68 O
ATOM 17 N3 U B1352 -96.907 117.342 49.198 1.00 50.68 N
ATOM 18 C4 U B1352 -96.892 118.136 50.331 1.00 50.68 C
ATOM 19 O4 U B1352 -95.937 118.080 51.107 1.00 50.68 O
ATOM 20 C5 U B1352 -98.030 118.986 50.507 1.00 50.68 C
ATOM 21 C6 U B1352 -98.998 118.951 49.589 1.00 50.68 C
ATOM 22 P G B1353 -103.878 116.118 49.627 1.00 69.65 P
ATOM 23 OP1 G B1353 -105.357 115.931 49.523 1.00 69.65 O
ATOM 24 OP2 G B1353 -103.307 116.485 50.945 1.00 69.65 O
ATOM 25 O5' G B1353 -103.114 114.837 49.036 1.00 69.65 O
TER
ATOM 2 P A A1248 -101.172 126.022 35.887 1.00 70.23 P
ATOM 3 OP1 A A1248 -100.329 125.347 34.863 1.00 70.23 O
ATOM 4 OP2 A A1248 -102.654 125.890 35.809 1.00 70.23 O
ATOM 5 O5' A A1248 -100.676 125.621 37.341 1.00 70.23 O
ATOM 6 C5' A A1248 -100.532 124.260 37.700 1.00 70.23 C
ATOM 7 C4' A A1248 -99.100 123.928 38.009 1.00 70.23 C
ATOM 8 O4' A A1248 -98.783 124.349 39.364 1.00 70.23 O
ATOM 9 C3' A A1248 -98.754 122.452 37.950 1.00 70.23 C
ATOM 10 O3' A A1248 -98.362 122.050 36.650 1.00 70.23 O
ATOM 11 C2' A A1248 -97.654 122.296 38.993 1.00 70.23 C
ATOM 12 O2' A A1248 -96.389 122.629 38.437 1.00 70.23 O
ATOM 13 C1' A A1248 -98.038 123.358 40.026 1.00 70.23 C
ATOM 14 N9 A A1248 -98.872 122.827 41.136 1.00 70.09 N
ATOM 15 C8 A A1248 -100.199 123.165 41.308 1.00 70.09 C
ATOM 16 N7 A A1248 -100.773 122.638 42.368 1.00 70.09 N
ATOM 17 C5 A A1248 -99.761 121.908 42.972 1.00 70.09 C
ATOM 18 C6 A A1248 -99.755 121.123 44.141 1.00 70.09 C
ATOM 19 N6 A A1248 -100.815 120.943 44.918 1.00 70.09 N
ATOM 20 N1 A A1248 -98.609 120.522 44.487 1.00 70.09 N
ATOM 21 C2 A A1248 -97.542 120.711 43.703 1.00 70.09 C
ATOM 22 N3 A A1248 -97.422 121.426 42.581 1.00 70.09 N
ATOM 23 C4 A A1248 -98.579 122.022 42.241 1.00 70.09 C
ATOM 24 P A A1249 -98.424 120.501 36.231 1.00 67.94 P
ATOM 25 OP1 A A1249 -97.715 120.365 34.927 1.00 67.94 O
ATOM 26 OP2 A A1249 -99.847 120.082 36.325 1.00 67.94 O
ATOM 27 O5' A A1249 -97.580 119.798 37.375 1.00 67.94 O
TER
ATOM 1 O3' G B1351 -101.941 122.530 51.134 1.00 52.35 O
ATOM 2 P U B1352 -102.603 121.120 51.452 1.00 50.52 P
ATOM 3 OP1 U B1352 -104.067 121.295 51.340 1.00 50.52 O
ATOM 4 OP2 U B1352 -102.037 120.653 52.741 1.00 50.52 O
ATOM 5 O5' U B1352 -102.065 120.210 50.259 1.00 50.52 O
ATOM 6 C5' U B1352 -102.552 120.385 48.939 1.00 50.52 C
ATOM 7 C4' U B1352 -102.117 119.263 48.031 1.00 50.52 C
ATOM 8 O4' U B1352 -100.730 119.448 47.647 1.00 50.52 O
ATOM 9 C3' U B1352 -102.163 117.856 48.622 1.00 50.52 C
ATOM 10 O3' U B1352 -103.466 117.285 48.594 1.00 50.52 O
ATOM 11 C2' U B1352 -101.154 117.108 47.761 1.00 50.52 C
ATOM 12 O2' U B1352 -101.731 116.742 46.515 1.00 50.52 O
ATOM 13 C1' U B1352 -100.098 118.191 47.510 1.00 50.52 C
ATOM 14 N1 U B1352 -98.969 118.126 48.478 1.00 50.68 N
ATOM 15 C2 U B1352 -97.885 117.282 48.234 1.00 50.68 C
ATOM 16 O2 U B1352 -97.792 116.537 47.264 1.00 50.68 O
ATOM 17 N3 U B1352 -96.907 117.342 49.198 1.00 50.68 N
ATOM 18 C4 U B1352 -96.892 118.136 50.331 1.00 50.68 C
ATOM 19 O4 U B1352 -95.937 118.080 51.107 1.00 50.68 O
ATOM 20 C5 U B1352 -98.030 118.986 50.507 1.00 50.68 C
ATOM 21 C6 U B1352 -98.998 118.951 49.589 1.00 50.68 C
ATOM 22 P G B1353 -103.878 116.118 49.627 1.00 69.65 P
ATOM 23 OP1 G B1353 -105.357 115.931 49.523 1.00 69.65 O
ATOM 24 OP2 G B1353 -103.307 116.485 50.945 1.00 69.65 O
ATOM 25 O5' G B1353 -103.114 114.837 49.036 1.00 69.65 O
TER
Atoms:
OP1: (-100.329,125.347,34.863)
OP2: (-102.654,125.890,35.809)
C3': (-98.754,122.452,37.950)
C1': (-98.038,123.358,40.026)
C5': (-100.532,124.260,37.700)
O4': (-98.783,124.349,39.364)
C8: (-100.199,123.165,41.308)
O2': (-96.389,122.629,38.437)
C6: (-99.755,121.123,44.141)
C5: (-99.761,121.908,42.972)
C4: (-98.579,122.022,42.241)
P: (-101.172,126.022,35.887)
C4': (-99.100,123.928,38.009)
C2': (-97.654,122.296,38.993)
C2: (-97.542,120.711,43.703)
N1: (-98.609,120.522,44.487)
N3: (-97.422,121.426,42.581)
N6: (-100.815,120.943,44.918)
N7: (-100.773,122.638,42.368)
N9: (-98.872,122.827,41.136)
O5': (-100.676,125.621,37.341)
O3': (-98.362,122.050,36.650)
OP2: (-102.654,125.890,35.809)
C3': (-98.754,122.452,37.950)
C1': (-98.038,123.358,40.026)
C5': (-100.532,124.260,37.700)
O4': (-98.783,124.349,39.364)
C8: (-100.199,123.165,41.308)
O2': (-96.389,122.629,38.437)
C6: (-99.755,121.123,44.141)
C5: (-99.761,121.908,42.972)
C4: (-98.579,122.022,42.241)
P: (-101.172,126.022,35.887)
C4': (-99.100,123.928,38.009)
C2': (-97.654,122.296,38.993)
C2: (-97.542,120.711,43.703)
N1: (-98.609,120.522,44.487)
N3: (-97.422,121.426,42.581)
N6: (-100.815,120.943,44.918)
N7: (-100.773,122.638,42.368)
N9: (-98.872,122.827,41.136)
O5': (-100.676,125.621,37.341)
O3': (-98.362,122.050,36.650)
C4: (-96.892,118.136,50.331)
N3: (-96.907,117.342,49.198)
OP1: (-104.067,121.295,51.340)
OP2: (-102.037,120.653,52.741)
C2: (-97.885,117.282,48.234)
C1': (-100.098,118.191,47.510)
C3': (-102.163,117.856,48.622)
O5': (-102.065,120.210,50.259)
O4': (-100.730,119.448,47.647)
C5': (-102.552,120.385,48.939)
P: (-102.603,121.120,51.452)
C4': (-102.117,119.263,48.031)
C2': (-101.154,117.108,47.761)
O2': (-101.731,116.742,46.515)
N1: (-98.969,118.126,48.478)
O4: (-95.937,118.080,51.107)
O2: (-97.792,116.537,47.264)
C6: (-98.998,118.951,49.589)
C5: (-98.030,118.986,50.507)
O3': (-103.466,117.285,48.594)
N3: (-96.907,117.342,49.198)
OP1: (-104.067,121.295,51.340)
OP2: (-102.037,120.653,52.741)
C2: (-97.885,117.282,48.234)
C1': (-100.098,118.191,47.510)
C3': (-102.163,117.856,48.622)
O5': (-102.065,120.210,50.259)
O4': (-100.730,119.448,47.647)
C5': (-102.552,120.385,48.939)
P: (-102.603,121.120,51.452)
C4': (-102.117,119.263,48.031)
C2': (-101.154,117.108,47.761)
O2': (-101.731,116.742,46.515)
N1: (-98.969,118.126,48.478)
O4: (-95.937,118.080,51.107)
O2: (-97.792,116.537,47.264)
C6: (-98.998,118.951,49.589)
C5: (-98.030,118.986,50.507)
O3': (-103.466,117.285,48.594)
Image (generated by PyMOL):