ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A516:A517

Extra

PDB:
ATOM 1 O3' G A 515 -111.880 18.672 -51.648 1.00 5.63 O
ATOM 2 P G A 516 -111.545 19.578 -52.927 1.00 38.87 P
ATOM 3 OP1 G A 516 -110.863 18.771 -53.963 1.00 19.59 O
ATOM 4 OP2 G A 516 -110.858 20.755 -52.344 1.00 19.59 O
ATOM 5 O5' G A 516 -112.972 20.030 -53.490 1.00 22.93 O
ATOM 6 C5' G A 516 -113.774 19.126 -54.283 1.00 24.14 C
ATOM 7 C4' G A 516 -115.118 19.739 -54.625 1.00 25.07 C
ATOM 8 O4' G A 516 -115.807 20.120 -53.405 1.00 25.27 O
ATOM 9 C3' G A 516 -115.127 21.008 -55.457 1.00 25.55 C
ATOM 10 O3' G A 516 -114.988 20.772 -56.845 1.00 25.83 O
ATOM 11 C2' G A 516 -116.488 21.603 -55.120 1.00 25.91 C
ATOM 12 O2' G A 516 -117.561 20.990 -55.813 1.00 26.97 O
ATOM 13 C1' G A 516 -116.596 21.279 -53.635 1.00 26.03 C
ATOM 14 N9 G A 516 -116.048 22.383 -52.845 1.00 18.18 N
ATOM 15 C8 G A 516 -114.786 22.473 -52.300 1.00 18.51 C
ATOM 16 N7 G A 516 -114.571 23.607 -51.693 1.00 19.50 N
ATOM 17 C5 G A 516 -115.762 24.303 -51.838 1.00 18.31 C
ATOM 18 C6 G A 516 -116.115 25.582 -51.399 1.00 17.78 C
ATOM 19 O6 G A 516 -115.424 26.395 -50.784 1.00 16.42 O
ATOM 20 N1 G A 516 -117.421 25.895 -51.744 1.00 18.82 N
ATOM 21 C2 G A 516 -118.272 25.069 -52.432 1.00 19.54 C
ATOM 22 N2 G A 516 -119.502 25.525 -52.644 1.00 20.27 N
ATOM 23 N3 G A 516 -117.946 23.881 -52.868 1.00 19.06 N
ATOM 24 C4 G A 516 -116.686 23.558 -52.534 1.00 18.51 C
ATOM 25 P A A 517 -114.366 21.929 -57.785 1.00 62.80 P
ATOM 26 OP1 A A 517 -114.287 21.421 -59.183 1.00 48.29 O
ATOM 27 OP2 A A 517 -113.143 22.459 -57.128 1.00 49.57 O
ATOM 28 O5' A A 517 -115.472 23.075 -57.750 1.00 40.65 O
TER

ATOM 1 O3' G B 516 -114.988 20.772 -56.845 1.00 25.83 O
ATOM 2 P A B 517 -114.366 21.929 -57.785 1.00 62.80 P
ATOM 3 OP1 A B 517 -114.287 21.421 -59.183 1.00 48.29 O
ATOM 4 OP2 A B 517 -113.143 22.459 -57.128 1.00 49.57 O
ATOM 5 O5' A B 517 -115.472 23.075 -57.750 1.00 40.65 O
ATOM 6 C5' A B 517 -116.813 22.820 -58.218 1.00 40.84 C
ATOM 7 C4' A B 517 -117.669 24.058 -58.073 1.00 40.60 C
ATOM 8 O4' A B 517 -117.820 24.374 -56.667 1.00 41.12 O
ATOM 9 C3' A B 517 -117.126 25.332 -58.704 1.00 39.91 C
ATOM 10 O3' A B 517 -117.472 25.425 -60.084 1.00 38.69 O
ATOM 11 C2' A B 517 -117.810 26.416 -57.887 1.00 40.54 C
ATOM 12 O2' A B 517 -119.125 26.657 -58.327 1.00 40.77 O
ATOM 13 C1' A B 517 -117.866 25.778 -56.500 1.00 41.59 C
ATOM 14 N9 A B 517 -116.735 26.174 -55.662 1.00 25.95 N
ATOM 15 C8 A B 517 -115.528 25.536 -55.524 1.00 26.81 C
ATOM 16 N7 A B 517 -114.710 26.136 -54.700 1.00 27.50 N
ATOM 17 C5 A B 517 -115.425 27.242 -54.262 1.00 27.95 C
ATOM 18 C6 A B 517 -115.108 28.270 -53.374 1.00 29.31 C
ATOM 19 N6 A B 517 -113.949 28.350 -52.730 1.00 30.32 N
ATOM 20 N1 A B 517 -116.030 29.225 -53.163 1.00 30.19 N
ATOM 21 C2 A B 517 -117.191 29.138 -53.808 1.00 29.37 C
ATOM 22 N3 A B 517 -117.611 28.217 -54.666 1.00 28.47 N
ATOM 23 C4 A B 517 -116.669 27.282 -54.850 1.00 27.31 C
ATOM 24 P G B 518 -116.502 26.211 -61.111 1.00 53.30 P
ATOM 25 OP1 G B 518 -116.952 25.813 -62.468 1.00 48.74 O
ATOM 26 OP2 G B 518 -115.077 26.019 -60.742 1.00 48.79 O
ATOM 27 O5' G B 518 -116.857 27.749 -60.859 1.00 38.86 O
TER

Atoms:
OP1: (-110.863,18.771,-53.963)
OP2: (-110.858,20.755,-52.344)
C3': (-115.127,21.008,-55.457)
C1': (-116.596,21.279,-53.635)
C5': (-113.774,19.126,-54.283)
O6: (-115.424,26.395,-50.784)
O4': (-115.807,20.120,-53.405)
C8: (-114.786,22.473,-52.300)
C2: (-118.272,25.069,-52.432)
C6: (-116.115,25.582,-51.399)
C5: (-115.762,24.303,-51.838)
C4: (-116.686,23.558,-52.534)
P: (-111.545,19.578,-52.927)
C4': (-115.118,19.739,-54.625)
C2': (-116.488,21.603,-55.120)
O2': (-117.561,20.990,-55.813)
N1: (-117.421,25.895,-51.744)
N2: (-119.502,25.525,-52.644)
N3: (-117.946,23.881,-52.868)
N7: (-114.571,23.607,-51.693)
N9: (-116.048,22.383,-52.845)
O5': (-112.972,20.030,-53.490)
O3': (-114.988,20.772,-56.845)
OP1: (-114.287,21.421,-59.183)
OP2: (-113.143,22.459,-57.128)
C3': (-117.126,25.332,-58.704)
C1': (-117.866,25.778,-56.500)
C5': (-116.813,22.820,-58.218)
O4': (-117.820,24.374,-56.667)
C8: (-115.528,25.536,-55.524)
O2': (-119.125,26.657,-58.327)
C6: (-115.108,28.270,-53.374)
C5: (-115.425,27.242,-54.262)
C4: (-116.669,27.282,-54.850)
P: (-114.366,21.929,-57.785)
C4': (-117.669,24.058,-58.073)
C2': (-117.810,26.416,-57.887)
C2: (-117.191,29.138,-53.808)
N1: (-116.030,29.225,-53.163)
N3: (-117.611,28.217,-54.666)
N6: (-113.949,28.350,-52.730)
N7: (-114.710,26.136,-54.700)
N9: (-116.735,26.174,-55.662)
O5': (-115.472,23.075,-57.750)
O3': (-117.472,25.425,-60.084)
Image (generated by PyMOL):
PyMOL image
show in jmol