ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A882:A151

Extra

PDB:
ATOM 1 O3' A A 881 59.363 117.420 62.498 1.00 37.72 O
ATOM 2 P A A 882 60.583 117.720 63.503 1.00 37.81 P
ATOM 3 OP1 A A 882 59.991 117.708 64.857 1.00 37.68 O
ATOM 4 OP2 A A 882 61.390 118.896 63.067 1.00 36.42 O
ATOM 5 O5' A A 882 61.488 116.419 63.386 1.00 35.50 O
ATOM 6 C5' A A 882 61.918 115.914 62.109 1.00 32.59 C
ATOM 7 C4' A A 882 63.103 115.005 62.298 1.00 29.70 C
ATOM 8 O4' A A 882 64.219 115.771 62.813 1.00 28.43 O
ATOM 9 C3' A A 882 62.882 113.922 63.340 1.00 29.93 C
ATOM 10 O3' A A 882 62.204 112.804 62.779 1.00 30.17 O
ATOM 11 C2' A A 882 64.304 113.604 63.785 1.00 29.28 C
ATOM 12 O2' A A 882 64.986 112.796 62.849 1.00 32.32 O
ATOM 13 C1' A A 882 64.940 114.994 63.758 1.00 27.92 C
ATOM 14 N9 A A 882 64.935 115.683 65.054 1.00 27.75 N
ATOM 15 C8 A A 882 64.156 116.732 65.476 1.00 27.85 C
ATOM 16 N7 A A 882 64.423 117.133 66.692 1.00 28.20 N
ATOM 17 C5 A A 882 65.443 116.296 67.104 1.00 26.83 C
ATOM 18 C6 A A 882 66.170 116.225 68.302 1.00 27.28 C
ATOM 19 N6 A A 882 65.987 117.050 69.331 1.00 26.42 N
ATOM 20 N1 A A 882 67.107 115.269 68.406 1.00 28.07 N
ATOM 21 C2 A A 882 67.298 114.450 67.367 1.00 28.76 C
ATOM 22 N3 A A 882 66.687 114.424 66.181 1.00 27.38 N
ATOM 23 C4 A A 882 65.759 115.387 66.112 1.00 26.98 C
ATOM 24 P C A 883 60.936 112.157 63.534 1.00 29.80 P
ATOM 25 OP1 C A 883 60.352 111.227 62.569 1.00 30.52 O
ATOM 26 OP2 C A 883 60.060 113.190 64.162 1.00 31.08 O
ATOM 27 O5' C A 883 61.602 111.264 64.669 1.00 28.73 O
TER

ATOM 1 O3' C B 150 69.934 112.213 65.703 1.00 28.68 O
ATOM 2 P U B 151 69.772 110.672 66.092 1.00 31.60 P
ATOM 3 OP1 U B 151 69.125 110.603 67.418 1.00 31.87 O
ATOM 4 OP2 U B 151 71.076 109.998 65.865 1.00 32.18 O
ATOM 5 O5' U B 151 68.771 110.093 65.001 1.00 31.38 O
ATOM 6 C5' U B 151 67.416 110.558 64.916 1.00 34.29 C
ATOM 7 C4' U B 151 66.715 109.893 63.762 1.00 35.81 C
ATOM 8 O4' U B 151 67.425 110.183 62.533 1.00 37.08 O
ATOM 9 C3' U B 151 66.709 108.382 63.811 1.00 36.15 C
ATOM 10 O3' U B 151 65.644 107.935 64.622 1.00 33.00 O
ATOM 11 C2' U B 151 66.444 108.030 62.361 1.00 37.55 C
ATOM 12 O2' U B 151 65.063 108.204 62.098 1.00 39.00 O
ATOM 13 C1' U B 151 67.278 109.094 61.638 1.00 38.07 C
ATOM 14 N1 U B 151 68.603 108.591 61.231 1.00 39.25 N
ATOM 15 C2 U B 151 68.662 107.858 60.052 1.00 40.40 C
ATOM 16 O2 U B 151 67.702 107.756 59.284 1.00 41.46 O
ATOM 17 N3 U B 151 69.887 107.275 59.789 1.00 41.29 N
ATOM 18 C4 U B 151 71.036 107.384 60.538 1.00 41.11 C
ATOM 19 O4 U B 151 71.982 106.639 60.294 1.00 42.25 O
ATOM 20 C5 U B 151 70.915 108.233 61.681 1.00 40.76 C
ATOM 21 C6 U B 151 69.734 108.789 61.986 1.00 39.83 C
ATOM 22 P G B 152 65.807 106.589 65.446 1.00 32.61 P
ATOM 23 OP1 G B 152 64.637 106.554 66.363 1.00 35.12 O
ATOM 24 OP2 G B 152 67.179 106.567 66.005 1.00 31.42 O
ATOM 25 O5' G B 152 65.714 105.436 64.348 1.00 33.66 O
TER

Atoms:
OP1: (59.991,117.708,64.857)
OP2: (61.390,118.896,63.067)
C3': (62.882,113.922,63.340)
C1': (64.940,114.994,63.758)
C5': (61.918,115.914,62.109)
O4': (64.219,115.771,62.813)
C8: (64.156,116.732,65.476)
O2': (64.986,112.796,62.849)
C6: (66.170,116.225,68.302)
C5: (65.443,116.296,67.104)
C4: (65.759,115.387,66.112)
P: (60.583,117.720,63.503)
C4': (63.103,115.005,62.298)
C2': (64.304,113.604,63.785)
C2: (67.298,114.450,67.367)
N1: (67.107,115.269,68.406)
N3: (66.687,114.424,66.181)
N6: (65.987,117.050,69.331)
N7: (64.423,117.133,66.692)
N9: (64.935,115.683,65.054)
O5': (61.488,116.419,63.386)
O3': (62.204,112.804,62.779)
C4: (71.036,107.384,60.538)
N3: (69.887,107.275,59.789)
OP1: (69.125,110.603,67.418)
OP2: (71.076,109.998,65.865)
C2: (68.662,107.858,60.052)
C1': (67.278,109.094,61.638)
C3': (66.709,108.382,63.811)
O5': (68.771,110.093,65.001)
O4': (67.425,110.183,62.533)
C5': (67.416,110.558,64.916)
P: (69.772,110.672,66.092)
C4': (66.715,109.893,63.762)
C2': (66.444,108.030,62.361)
O2': (65.063,108.204,62.098)
N1: (68.603,108.591,61.231)
O4: (71.982,106.639,60.294)
O2: (67.702,107.756,59.284)
C6: (69.734,108.789,61.986)
C5: (70.915,108.233,61.681)
O3': (65.644,107.935,64.622)
Image (generated by PyMOL):
PyMOL image
show in jmol