Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A910:A887
Extra
PDB:
ATOM 1 O3' A A 909 62.123 98.684 84.712 1.00 48.03 O
ATOM 2 P A A 910 62.551 100.187 85.096 1.00 49.20 P
ATOM 3 OP1 A A 910 63.814 100.549 84.393 1.00 48.10 O
ATOM 4 OP2 A A 910 62.450 100.340 86.580 1.00 47.63 O
ATOM 5 O5' A A 910 61.390 101.072 84.465 1.00 47.40 O
ATOM 6 C5' A A 910 60.013 100.846 84.819 1.00 42.37 C
ATOM 7 C4' A A 910 59.117 101.626 83.898 1.00 38.48 C
ATOM 8 O4' A A 910 59.421 103.025 84.068 1.00 38.25 O
ATOM 9 C3' A A 910 59.279 101.340 82.408 1.00 36.13 C
ATOM 10 O3' A A 910 58.024 101.581 81.784 1.00 34.16 O
ATOM 11 C2' A A 910 60.287 102.400 81.981 1.00 35.89 C
ATOM 12 O2' A A 910 60.231 102.744 80.617 1.00 34.88 O
ATOM 13 C1' A A 910 59.834 103.575 82.833 1.00 37.41 C
ATOM 14 N9 A A 910 60.850 104.585 83.113 1.00 37.99 N
ATOM 15 C8 A A 910 62.216 104.478 83.109 1.00 39.32 C
ATOM 16 N7 A A 910 62.831 105.582 83.450 1.00 39.30 N
ATOM 17 C5 A A 910 61.801 106.482 83.675 1.00 37.88 C
ATOM 18 C6 A A 910 61.791 107.830 84.059 1.00 37.52 C
ATOM 19 N6 A A 910 62.892 108.540 84.268 1.00 38.08 N
ATOM 20 N1 A A 910 60.597 108.431 84.218 1.00 37.22 N
ATOM 21 C2 A A 910 59.492 107.712 83.994 1.00 38.09 C
ATOM 22 N3 A A 910 59.374 106.443 83.614 1.00 38.17 N
ATOM 23 C4 A A 910 60.580 105.881 83.471 1.00 37.64 C
ATOM 24 P G A 911 57.117 100.347 81.306 1.00 32.67 P
ATOM 25 OP1 G A 911 55.708 100.791 81.279 1.00 34.84 O
ATOM 26 OP2 G A 911 57.494 99.191 82.136 1.00 32.93 O
ATOM 27 O5' G A 911 57.586 100.092 79.802 1.00 33.39 O
TER
ATOM 1 O3' C B 886 57.946 108.886 81.604 1.00 30.17 O
ATOM 2 P U B 887 56.350 108.757 81.761 1.00 29.07 P
ATOM 3 OP1 U B 887 56.056 108.229 83.098 1.00 26.25 O
ATOM 4 OP2 U B 887 55.801 108.080 80.566 1.00 30.01 O
ATOM 5 O5' U B 887 55.855 110.263 81.751 1.00 30.42 O
ATOM 6 C5' U B 887 56.088 111.117 82.877 1.00 32.11 C
ATOM 7 C4' U B 887 55.747 112.534 82.513 1.00 32.98 C
ATOM 8 O4' U B 887 56.425 112.863 81.269 1.00 33.28 O
ATOM 9 C3' U B 887 54.305 112.784 82.110 1.00 32.49 C
ATOM 10 O3' U B 887 53.396 112.845 83.206 1.00 32.61 O
ATOM 11 C2' U B 887 54.434 114.131 81.424 1.00 33.15 C
ATOM 12 O2' U B 887 54.556 115.137 82.409 1.00 34.87 O
ATOM 13 C1' U B 887 55.763 113.964 80.670 1.00 33.97 C
ATOM 14 N1 U B 887 55.595 113.741 79.216 1.00 35.13 N
ATOM 15 C2 U B 887 55.260 114.846 78.437 1.00 35.92 C
ATOM 16 O2 U B 887 55.191 115.976 78.892 1.00 38.23 O
ATOM 17 N3 U B 887 55.023 114.584 77.108 1.00 35.63 N
ATOM 18 C4 U B 887 55.116 113.376 76.472 1.00 36.33 C
ATOM 19 O4 U B 887 54.960 113.331 75.248 1.00 36.31 O
ATOM 20 C5 U B 887 55.503 112.288 77.322 1.00 36.15 C
ATOM 21 C6 U B 887 55.725 112.503 78.631 1.00 34.78 C
ATOM 22 P G B 888 51.827 112.560 82.954 1.00 33.55 P
ATOM 23 OP1 G B 888 51.025 112.729 84.200 1.00 34.82 O
ATOM 24 OP2 G B 888 51.762 111.304 82.216 1.00 34.61 O
ATOM 25 O5' G B 888 51.368 113.709 81.960 1.00 32.55 O
TER
ATOM 2 P A A 910 62.551 100.187 85.096 1.00 49.20 P
ATOM 3 OP1 A A 910 63.814 100.549 84.393 1.00 48.10 O
ATOM 4 OP2 A A 910 62.450 100.340 86.580 1.00 47.63 O
ATOM 5 O5' A A 910 61.390 101.072 84.465 1.00 47.40 O
ATOM 6 C5' A A 910 60.013 100.846 84.819 1.00 42.37 C
ATOM 7 C4' A A 910 59.117 101.626 83.898 1.00 38.48 C
ATOM 8 O4' A A 910 59.421 103.025 84.068 1.00 38.25 O
ATOM 9 C3' A A 910 59.279 101.340 82.408 1.00 36.13 C
ATOM 10 O3' A A 910 58.024 101.581 81.784 1.00 34.16 O
ATOM 11 C2' A A 910 60.287 102.400 81.981 1.00 35.89 C
ATOM 12 O2' A A 910 60.231 102.744 80.617 1.00 34.88 O
ATOM 13 C1' A A 910 59.834 103.575 82.833 1.00 37.41 C
ATOM 14 N9 A A 910 60.850 104.585 83.113 1.00 37.99 N
ATOM 15 C8 A A 910 62.216 104.478 83.109 1.00 39.32 C
ATOM 16 N7 A A 910 62.831 105.582 83.450 1.00 39.30 N
ATOM 17 C5 A A 910 61.801 106.482 83.675 1.00 37.88 C
ATOM 18 C6 A A 910 61.791 107.830 84.059 1.00 37.52 C
ATOM 19 N6 A A 910 62.892 108.540 84.268 1.00 38.08 N
ATOM 20 N1 A A 910 60.597 108.431 84.218 1.00 37.22 N
ATOM 21 C2 A A 910 59.492 107.712 83.994 1.00 38.09 C
ATOM 22 N3 A A 910 59.374 106.443 83.614 1.00 38.17 N
ATOM 23 C4 A A 910 60.580 105.881 83.471 1.00 37.64 C
ATOM 24 P G A 911 57.117 100.347 81.306 1.00 32.67 P
ATOM 25 OP1 G A 911 55.708 100.791 81.279 1.00 34.84 O
ATOM 26 OP2 G A 911 57.494 99.191 82.136 1.00 32.93 O
ATOM 27 O5' G A 911 57.586 100.092 79.802 1.00 33.39 O
TER
ATOM 1 O3' C B 886 57.946 108.886 81.604 1.00 30.17 O
ATOM 2 P U B 887 56.350 108.757 81.761 1.00 29.07 P
ATOM 3 OP1 U B 887 56.056 108.229 83.098 1.00 26.25 O
ATOM 4 OP2 U B 887 55.801 108.080 80.566 1.00 30.01 O
ATOM 5 O5' U B 887 55.855 110.263 81.751 1.00 30.42 O
ATOM 6 C5' U B 887 56.088 111.117 82.877 1.00 32.11 C
ATOM 7 C4' U B 887 55.747 112.534 82.513 1.00 32.98 C
ATOM 8 O4' U B 887 56.425 112.863 81.269 1.00 33.28 O
ATOM 9 C3' U B 887 54.305 112.784 82.110 1.00 32.49 C
ATOM 10 O3' U B 887 53.396 112.845 83.206 1.00 32.61 O
ATOM 11 C2' U B 887 54.434 114.131 81.424 1.00 33.15 C
ATOM 12 O2' U B 887 54.556 115.137 82.409 1.00 34.87 O
ATOM 13 C1' U B 887 55.763 113.964 80.670 1.00 33.97 C
ATOM 14 N1 U B 887 55.595 113.741 79.216 1.00 35.13 N
ATOM 15 C2 U B 887 55.260 114.846 78.437 1.00 35.92 C
ATOM 16 O2 U B 887 55.191 115.976 78.892 1.00 38.23 O
ATOM 17 N3 U B 887 55.023 114.584 77.108 1.00 35.63 N
ATOM 18 C4 U B 887 55.116 113.376 76.472 1.00 36.33 C
ATOM 19 O4 U B 887 54.960 113.331 75.248 1.00 36.31 O
ATOM 20 C5 U B 887 55.503 112.288 77.322 1.00 36.15 C
ATOM 21 C6 U B 887 55.725 112.503 78.631 1.00 34.78 C
ATOM 22 P G B 888 51.827 112.560 82.954 1.00 33.55 P
ATOM 23 OP1 G B 888 51.025 112.729 84.200 1.00 34.82 O
ATOM 24 OP2 G B 888 51.762 111.304 82.216 1.00 34.61 O
ATOM 25 O5' G B 888 51.368 113.709 81.960 1.00 32.55 O
TER
Atoms:
OP1: (63.814,100.549,84.393)
OP2: (62.450,100.340,86.580)
C3': (59.279,101.340,82.408)
C1': (59.834,103.575,82.833)
C5': (60.013,100.846,84.819)
O4': (59.421,103.025,84.068)
C8: (62.216,104.478,83.109)
O2': (60.231,102.744,80.617)
C6: (61.791,107.830,84.059)
C5: (61.801,106.482,83.675)
C4: (60.580,105.881,83.471)
P: (62.551,100.187,85.096)
C4': (59.117,101.626,83.898)
C2': (60.287,102.400,81.981)
C2: (59.492,107.712,83.994)
N1: (60.597,108.431,84.218)
N3: (59.374,106.443,83.614)
N6: (62.892,108.540,84.268)
N7: (62.831,105.582,83.450)
N9: (60.850,104.585,83.113)
O5': (61.390,101.072,84.465)
O3': (58.024,101.581,81.784)
OP2: (62.450,100.340,86.580)
C3': (59.279,101.340,82.408)
C1': (59.834,103.575,82.833)
C5': (60.013,100.846,84.819)
O4': (59.421,103.025,84.068)
C8: (62.216,104.478,83.109)
O2': (60.231,102.744,80.617)
C6: (61.791,107.830,84.059)
C5: (61.801,106.482,83.675)
C4: (60.580,105.881,83.471)
P: (62.551,100.187,85.096)
C4': (59.117,101.626,83.898)
C2': (60.287,102.400,81.981)
C2: (59.492,107.712,83.994)
N1: (60.597,108.431,84.218)
N3: (59.374,106.443,83.614)
N6: (62.892,108.540,84.268)
N7: (62.831,105.582,83.450)
N9: (60.850,104.585,83.113)
O5': (61.390,101.072,84.465)
O3': (58.024,101.581,81.784)
C4: (55.116,113.376,76.472)
N3: (55.023,114.584,77.108)
OP1: (56.056,108.229,83.098)
OP2: (55.801,108.080,80.566)
C2: (55.260,114.846,78.437)
C1': (55.763,113.964,80.670)
C3': (54.305,112.784,82.110)
O5': (55.855,110.263,81.751)
O4': (56.425,112.863,81.269)
C5': (56.088,111.117,82.877)
P: (56.350,108.757,81.761)
C4': (55.747,112.534,82.513)
C2': (54.434,114.131,81.424)
O2': (54.556,115.137,82.409)
N1: (55.595,113.741,79.216)
O4: (54.960,113.331,75.248)
O2: (55.191,115.976,78.892)
C6: (55.725,112.503,78.631)
C5: (55.503,112.288,77.322)
O3': (53.396,112.845,83.206)
N3: (55.023,114.584,77.108)
OP1: (56.056,108.229,83.098)
OP2: (55.801,108.080,80.566)
C2: (55.260,114.846,78.437)
C1': (55.763,113.964,80.670)
C3': (54.305,112.784,82.110)
O5': (55.855,110.263,81.751)
O4': (56.425,112.863,81.269)
C5': (56.088,111.117,82.877)
P: (56.350,108.757,81.761)
C4': (55.747,112.534,82.513)
C2': (54.434,114.131,81.424)
O2': (54.556,115.137,82.409)
N1: (55.595,113.741,79.216)
O4: (54.960,113.331,75.248)
O2: (55.191,115.976,78.892)
C6: (55.725,112.503,78.631)
C5: (55.503,112.288,77.322)
O3': (53.396,112.845,83.206)
Image (generated by PyMOL):