ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SD3:A34:A41

Extra

PDB:
ATOM 1 O3' A A 33 2.581 -22.049 31.053 1.00 33.76 O
ATOM 2 P U A 34 3.411 -23.411 30.856 1.00 37.06 P
ATOM 3 OP1 U A 34 2.455 -24.442 30.386 1.00 39.12 O
ATOM 4 OP2 U A 34 4.161 -23.655 32.111 1.00 33.43 O
ATOM 5 O5' U A 34 4.419 -23.031 29.685 1.00 27.78 O
ATOM 6 C5' U A 34 5.660 -23.699 29.539 1.00 27.11 C
ATOM 7 C4' U A 34 6.566 -22.960 28.589 1.00 29.15 C
ATOM 8 O4' U A 34 6.945 -21.680 29.164 1.00 29.35 O
ATOM 9 C3' U A 34 7.893 -23.633 28.267 1.00 26.44 C
ATOM 10 O3' U A 34 7.775 -24.625 27.259 1.00 31.18 O
ATOM 11 C2' U A 34 8.767 -22.457 27.852 1.00 26.00 C
ATOM 12 O2' U A 34 8.483 -22.073 26.515 1.00 22.33 O
ATOM 13 C1' U A 34 8.265 -21.355 28.786 1.00 26.78 C
ATOM 14 N1 U A 34 9.095 -21.239 30.006 1.00 24.03 N
ATOM 15 C2 U A 34 10.317 -20.617 29.858 1.00 23.24 C
ATOM 16 O2 U A 34 10.715 -20.189 28.788 1.00 20.62 O
ATOM 17 N3 U A 34 11.062 -20.522 31.003 1.00 25.38 N
ATOM 18 C4 U A 34 10.720 -20.974 32.260 1.00 27.42 C
ATOM 19 O4 U A 34 11.511 -20.805 33.191 1.00 27.91 O
ATOM 20 C5 U A 34 9.434 -21.605 32.338 1.00 24.92 C
ATOM 21 C6 U A 34 8.683 -21.710 31.231 1.00 23.51 C
ATOM 22 P G A 35 7.745 -26.188 27.641 1.00 33.52 P
ATOM 23 OP1 G A 35 6.343 -26.647 27.485 1.00 36.83 O
ATOM 24 OP2 G A 35 8.399 -26.333 28.964 1.00 38.22 O
ATOM 25 O5' G A 35 8.659 -26.837 26.515 1.00 40.15 O
TER

ATOM 1 O3' G B 40 14.864 -20.830 37.807 1.00 25.86 O
ATOM 2 P U B 41 14.370 -19.324 37.526 1.00 33.20 P
ATOM 3 OP1 U B 41 14.333 -18.630 38.835 1.00 31.65 O
ATOM 4 OP2 U B 41 13.124 -19.407 36.728 1.00 34.69 O
ATOM 5 O5' U B 41 15.546 -18.730 36.632 1.00 29.86 O
ATOM 6 C5' U B 41 16.904 -18.836 37.046 1.00 32.33 C
ATOM 7 C4' U B 41 17.830 -18.153 36.075 1.00 34.91 C
ATOM 8 O4' U B 41 17.697 -18.788 34.774 1.00 35.93 O
ATOM 9 C3' U B 41 17.547 -16.670 35.852 1.00 39.38 C
ATOM 10 O3' U B 41 18.768 -15.987 35.582 1.00 40.06 O
ATOM 11 C2' U B 41 16.681 -16.679 34.601 1.00 40.07 C
ATOM 12 O2' U B 41 16.695 -15.474 33.868 1.00 45.35 O
ATOM 13 C1' U B 41 17.297 -17.830 33.812 1.00 35.98 C
ATOM 14 N1 U B 41 16.355 -18.474 32.875 1.00 31.01 N
ATOM 15 C2 U B 41 16.725 -18.567 31.548 1.00 31.94 C
ATOM 16 O2 U B 41 17.796 -18.160 31.129 1.00 34.58 O
ATOM 17 N3 U B 41 15.794 -19.157 30.728 1.00 28.76 N
ATOM 18 C4 U B 41 14.558 -19.648 31.099 1.00 27.16 C
ATOM 19 O4 U B 41 13.833 -20.157 30.245 1.00 28.50 O
ATOM 20 C5 U B 41 14.250 -19.513 32.489 1.00 26.43 C
ATOM 21 C6 U B 41 15.135 -18.938 33.308 1.00 30.01 C
ATOM 22 P C B 42 19.445 -15.082 36.721 1.00 47.24 P
ATOM 23 OP1 C B 42 20.307 -15.975 37.532 1.00 50.16 O
ATOM 24 OP2 C B 42 18.351 -14.339 37.395 1.00 45.15 O
ATOM 25 O5' C B 42 20.348 -14.076 35.880 1.00 49.63 O
TER

Atoms:
C4: (10.720,-20.974,32.260)
N3: (11.062,-20.522,31.003)
OP1: (2.455,-24.442,30.386)
OP2: (4.161,-23.655,32.111)
C2: (10.317,-20.617,29.858)
C1': (8.265,-21.355,28.786)
C3': (7.893,-23.633,28.267)
O5': (4.419,-23.031,29.685)
O4': (6.945,-21.680,29.164)
C5': (5.660,-23.699,29.539)
P: (3.411,-23.411,30.856)
C4': (6.566,-22.960,28.589)
C2': (8.767,-22.457,27.852)
O2': (8.483,-22.073,26.515)
N1: (9.095,-21.239,30.006)
O4: (11.511,-20.805,33.191)
O2: (10.715,-20.189,28.788)
C6: (8.683,-21.710,31.231)
C5: (9.434,-21.605,32.338)
O3': (7.775,-24.625,27.259)
C4: (14.558,-19.648,31.099)
N3: (15.794,-19.157,30.728)
OP1: (14.333,-18.630,38.835)
OP2: (13.124,-19.407,36.728)
C2: (16.725,-18.567,31.548)
C1': (17.297,-17.830,33.812)
C3': (17.547,-16.670,35.852)
O5': (15.546,-18.730,36.632)
O4': (17.697,-18.788,34.774)
C5': (16.904,-18.836,37.046)
P: (14.370,-19.324,37.526)
C4': (17.830,-18.153,36.075)
C2': (16.681,-16.679,34.601)
O2': (16.695,-15.474,33.868)
N1: (16.355,-18.474,32.875)
O4: (13.833,-20.157,30.245)
O2: (17.796,-18.160,31.129)
C6: (15.135,-18.938,33.308)
C5: (14.250,-19.513,32.489)
O3': (18.768,-15.987,35.582)
Image (generated by PyMOL):
PyMOL image
show in jmol