Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2979:2980
Extra
PDB:
ATOM 1 O3' U A 978 -26.410 -27.790 90.820 1.00 89.17 O
ATOM 2 P G A 979 -26.907 -28.491 89.491 1.00 88.64 P
ATOM 3 OP1 G A 979 -25.767 -29.290 88.974 1.00 89.49 O
ATOM 4 OP2 G A 979 -27.519 -27.444 88.619 1.00 87.28 O
ATOM 5 O5' G A 979 -28.023 -29.442 90.071 1.00 89.63 O
ATOM 6 C5' G A 979 -27.909 -29.904 91.409 1.00 90.51 C
ATOM 7 C4' G A 979 -29.109 -30.687 91.813 1.00 91.31 C
ATOM 8 O4' G A 979 -29.948 -29.874 92.671 1.00 90.64 O
ATOM 9 C3' G A 979 -30.009 -31.102 90.665 1.00 91.31 C
ATOM 10 O3' G A 979 -29.567 -32.289 90.024 1.00 92.44 O
ATOM 11 C2' G A 979 -31.379 -31.209 91.326 1.00 91.50 C
ATOM 12 O2' G A 979 -31.518 -32.441 92.014 1.00 93.01 O
ATOM 13 C1' G A 979 -31.306 -30.078 92.357 1.00 90.64 C
ATOM 14 N9 G A 979 -31.830 -28.822 91.816 1.00 89.14 N
ATOM 15 C8 G A 979 -31.032 -27.918 91.160 1.00 88.09 C
ATOM 16 N7 G A 979 -31.697 -26.878 90.762 1.00 86.89 N
ATOM 17 C5 G A 979 -32.994 -27.132 91.177 1.00 87.19 C
ATOM 18 C6 G A 979 -34.125 -26.336 91.000 1.00 86.32 C
ATOM 19 O6 G A 979 -34.159 -25.247 90.433 1.00 85.11 O
ATOM 20 N1 G A 979 -35.260 -26.907 91.545 1.00 87.01 N
ATOM 21 C2 G A 979 -35.280 -28.104 92.189 1.00 88.39 C
ATOM 22 N2 G A 979 -36.483 -28.449 92.643 1.00 88.88 N
ATOM 23 N3 G A 979 -34.220 -28.878 92.368 1.00 89.25 N
ATOM 24 C4 G A 979 -33.115 -28.331 91.828 1.00 88.57 C
ATOM 25 P A A 980 -30.225 -32.745 88.636 1.00 92.52 P
ATOM 26 OP1 A A 980 -29.479 -33.944 88.159 1.00 93.78 O
ATOM 27 OP2 A A 980 -30.289 -31.541 87.765 1.00 91.01 O
ATOM 28 O5' A A 980 -31.688 -33.173 89.088 1.00 92.97 O
TER
ATOM 1 O3' G B 979 -29.567 -32.289 90.024 1.00 92.44 O
ATOM 2 P A B 980 -30.225 -32.745 88.636 1.00 92.52 P
ATOM 3 OP1 A B 980 -29.479 -33.944 88.159 1.00 93.78 O
ATOM 4 OP2 A B 980 -30.289 -31.541 87.765 1.00 91.01 O
ATOM 5 O5' A B 980 -31.688 -33.173 89.088 1.00 92.97 O
ATOM 6 C5' A B 980 -32.706 -33.420 88.145 1.00 92.94 C
ATOM 7 C4' A B 980 -34.045 -33.024 88.690 1.00 92.58 C
ATOM 8 O4' A B 980 -33.910 -31.849 89.528 1.00 91.55 O
ATOM 9 C3' A B 980 -35.077 -32.628 87.658 1.00 91.88 C
ATOM 10 O3' A B 980 -35.700 -33.748 87.055 1.00 92.93 O
ATOM 11 C2' A B 980 -36.024 -31.728 88.455 1.00 91.10 C
ATOM 12 O2' A B 980 -36.905 -32.488 89.257 1.00 92.11 O
ATOM 13 C1' A B 980 -35.044 -31.013 89.374 1.00 90.59 C
ATOM 14 N9 A B 980 -34.609 -29.726 88.802 1.00 89.13 N
ATOM 15 C8 A B 980 -33.354 -29.368 88.385 1.00 88.70 C
ATOM 16 N7 A B 980 -33.292 -28.141 87.921 1.00 87.36 N
ATOM 17 C5 A B 980 -34.599 -27.672 88.035 1.00 86.88 C
ATOM 18 C6 A B 980 -35.198 -26.453 87.706 1.00 85.60 C
ATOM 19 N6 A B 980 -34.530 -25.426 87.180 1.00 84.51 N
ATOM 20 N1 A B 980 -36.509 -26.308 87.938 1.00 85.52 N
ATOM 21 C2 A B 980 -37.171 -27.320 88.476 1.00 86.64 C
ATOM 22 N3 A B 980 -36.718 -28.514 88.822 1.00 87.89 N
ATOM 23 C4 A B 980 -35.411 -28.633 88.574 1.00 87.95 C
ATOM 24 P U B 981 -35.726 -33.900 85.457 1.00 90.86 P
ATOM 25 OP1 U B 981 -35.914 -35.345 85.158 1.00 92.38 O
ATOM 26 OP2 U B 981 -34.515 -33.210 84.925 1.00 90.04 O
ATOM 27 O5' U B 981 -37.049 -33.096 85.077 1.00 89.92 O
TER
ATOM 2 P G A 979 -26.907 -28.491 89.491 1.00 88.64 P
ATOM 3 OP1 G A 979 -25.767 -29.290 88.974 1.00 89.49 O
ATOM 4 OP2 G A 979 -27.519 -27.444 88.619 1.00 87.28 O
ATOM 5 O5' G A 979 -28.023 -29.442 90.071 1.00 89.63 O
ATOM 6 C5' G A 979 -27.909 -29.904 91.409 1.00 90.51 C
ATOM 7 C4' G A 979 -29.109 -30.687 91.813 1.00 91.31 C
ATOM 8 O4' G A 979 -29.948 -29.874 92.671 1.00 90.64 O
ATOM 9 C3' G A 979 -30.009 -31.102 90.665 1.00 91.31 C
ATOM 10 O3' G A 979 -29.567 -32.289 90.024 1.00 92.44 O
ATOM 11 C2' G A 979 -31.379 -31.209 91.326 1.00 91.50 C
ATOM 12 O2' G A 979 -31.518 -32.441 92.014 1.00 93.01 O
ATOM 13 C1' G A 979 -31.306 -30.078 92.357 1.00 90.64 C
ATOM 14 N9 G A 979 -31.830 -28.822 91.816 1.00 89.14 N
ATOM 15 C8 G A 979 -31.032 -27.918 91.160 1.00 88.09 C
ATOM 16 N7 G A 979 -31.697 -26.878 90.762 1.00 86.89 N
ATOM 17 C5 G A 979 -32.994 -27.132 91.177 1.00 87.19 C
ATOM 18 C6 G A 979 -34.125 -26.336 91.000 1.00 86.32 C
ATOM 19 O6 G A 979 -34.159 -25.247 90.433 1.00 85.11 O
ATOM 20 N1 G A 979 -35.260 -26.907 91.545 1.00 87.01 N
ATOM 21 C2 G A 979 -35.280 -28.104 92.189 1.00 88.39 C
ATOM 22 N2 G A 979 -36.483 -28.449 92.643 1.00 88.88 N
ATOM 23 N3 G A 979 -34.220 -28.878 92.368 1.00 89.25 N
ATOM 24 C4 G A 979 -33.115 -28.331 91.828 1.00 88.57 C
ATOM 25 P A A 980 -30.225 -32.745 88.636 1.00 92.52 P
ATOM 26 OP1 A A 980 -29.479 -33.944 88.159 1.00 93.78 O
ATOM 27 OP2 A A 980 -30.289 -31.541 87.765 1.00 91.01 O
ATOM 28 O5' A A 980 -31.688 -33.173 89.088 1.00 92.97 O
TER
ATOM 1 O3' G B 979 -29.567 -32.289 90.024 1.00 92.44 O
ATOM 2 P A B 980 -30.225 -32.745 88.636 1.00 92.52 P
ATOM 3 OP1 A B 980 -29.479 -33.944 88.159 1.00 93.78 O
ATOM 4 OP2 A B 980 -30.289 -31.541 87.765 1.00 91.01 O
ATOM 5 O5' A B 980 -31.688 -33.173 89.088 1.00 92.97 O
ATOM 6 C5' A B 980 -32.706 -33.420 88.145 1.00 92.94 C
ATOM 7 C4' A B 980 -34.045 -33.024 88.690 1.00 92.58 C
ATOM 8 O4' A B 980 -33.910 -31.849 89.528 1.00 91.55 O
ATOM 9 C3' A B 980 -35.077 -32.628 87.658 1.00 91.88 C
ATOM 10 O3' A B 980 -35.700 -33.748 87.055 1.00 92.93 O
ATOM 11 C2' A B 980 -36.024 -31.728 88.455 1.00 91.10 C
ATOM 12 O2' A B 980 -36.905 -32.488 89.257 1.00 92.11 O
ATOM 13 C1' A B 980 -35.044 -31.013 89.374 1.00 90.59 C
ATOM 14 N9 A B 980 -34.609 -29.726 88.802 1.00 89.13 N
ATOM 15 C8 A B 980 -33.354 -29.368 88.385 1.00 88.70 C
ATOM 16 N7 A B 980 -33.292 -28.141 87.921 1.00 87.36 N
ATOM 17 C5 A B 980 -34.599 -27.672 88.035 1.00 86.88 C
ATOM 18 C6 A B 980 -35.198 -26.453 87.706 1.00 85.60 C
ATOM 19 N6 A B 980 -34.530 -25.426 87.180 1.00 84.51 N
ATOM 20 N1 A B 980 -36.509 -26.308 87.938 1.00 85.52 N
ATOM 21 C2 A B 980 -37.171 -27.320 88.476 1.00 86.64 C
ATOM 22 N3 A B 980 -36.718 -28.514 88.822 1.00 87.89 N
ATOM 23 C4 A B 980 -35.411 -28.633 88.574 1.00 87.95 C
ATOM 24 P U B 981 -35.726 -33.900 85.457 1.00 90.86 P
ATOM 25 OP1 U B 981 -35.914 -35.345 85.158 1.00 92.38 O
ATOM 26 OP2 U B 981 -34.515 -33.210 84.925 1.00 90.04 O
ATOM 27 O5' U B 981 -37.049 -33.096 85.077 1.00 89.92 O
TER
Atoms:
OP1: (-25.767,-29.290,88.974)
OP2: (-27.519,-27.444,88.619)
C3': (-30.009,-31.102,90.665)
C1': (-31.306,-30.078,92.357)
C5': (-27.909,-29.904,91.409)
O6: (-34.159,-25.247,90.433)
O4': (-29.948,-29.874,92.671)
C8: (-31.032,-27.918,91.160)
C2: (-35.280,-28.104,92.189)
C6: (-34.125,-26.336,91.000)
C5: (-32.994,-27.132,91.177)
C4: (-33.115,-28.331,91.828)
P: (-26.907,-28.491,89.491)
C4': (-29.109,-30.687,91.813)
C2': (-31.379,-31.209,91.326)
O2': (-31.518,-32.441,92.014)
N1: (-35.260,-26.907,91.545)
N2: (-36.483,-28.449,92.643)
N3: (-34.220,-28.878,92.368)
N7: (-31.697,-26.878,90.762)
N9: (-31.830,-28.822,91.816)
O5': (-28.023,-29.442,90.071)
O3': (-29.567,-32.289,90.024)
OP2: (-27.519,-27.444,88.619)
C3': (-30.009,-31.102,90.665)
C1': (-31.306,-30.078,92.357)
C5': (-27.909,-29.904,91.409)
O6: (-34.159,-25.247,90.433)
O4': (-29.948,-29.874,92.671)
C8: (-31.032,-27.918,91.160)
C2: (-35.280,-28.104,92.189)
C6: (-34.125,-26.336,91.000)
C5: (-32.994,-27.132,91.177)
C4: (-33.115,-28.331,91.828)
P: (-26.907,-28.491,89.491)
C4': (-29.109,-30.687,91.813)
C2': (-31.379,-31.209,91.326)
O2': (-31.518,-32.441,92.014)
N1: (-35.260,-26.907,91.545)
N2: (-36.483,-28.449,92.643)
N3: (-34.220,-28.878,92.368)
N7: (-31.697,-26.878,90.762)
N9: (-31.830,-28.822,91.816)
O5': (-28.023,-29.442,90.071)
O3': (-29.567,-32.289,90.024)
OP1: (-29.479,-33.944,88.159)
OP2: (-30.289,-31.541,87.765)
C3': (-35.077,-32.628,87.658)
C1': (-35.044,-31.013,89.374)
C5': (-32.706,-33.420,88.145)
O4': (-33.910,-31.849,89.528)
C8: (-33.354,-29.368,88.385)
O2': (-36.905,-32.488,89.257)
C6: (-35.198,-26.453,87.706)
C5: (-34.599,-27.672,88.035)
C4: (-35.411,-28.633,88.574)
P: (-30.225,-32.745,88.636)
C4': (-34.045,-33.024,88.690)
C2': (-36.024,-31.728,88.455)
C2: (-37.171,-27.320,88.476)
N1: (-36.509,-26.308,87.938)
N3: (-36.718,-28.514,88.822)
N6: (-34.530,-25.426,87.180)
N7: (-33.292,-28.141,87.921)
N9: (-34.609,-29.726,88.802)
O5': (-31.688,-33.173,89.088)
O3': (-35.700,-33.748,87.055)
OP2: (-30.289,-31.541,87.765)
C3': (-35.077,-32.628,87.658)
C1': (-35.044,-31.013,89.374)
C5': (-32.706,-33.420,88.145)
O4': (-33.910,-31.849,89.528)
C8: (-33.354,-29.368,88.385)
O2': (-36.905,-32.488,89.257)
C6: (-35.198,-26.453,87.706)
C5: (-34.599,-27.672,88.035)
C4: (-35.411,-28.633,88.574)
P: (-30.225,-32.745,88.636)
C4': (-34.045,-33.024,88.690)
C2': (-36.024,-31.728,88.455)
C2: (-37.171,-27.320,88.476)
N1: (-36.509,-26.308,87.938)
N3: (-36.718,-28.514,88.822)
N6: (-34.530,-25.426,87.180)
N7: (-33.292,-28.141,87.921)
N9: (-34.609,-29.726,88.802)
O5': (-31.688,-33.173,89.088)
O3': (-35.700,-33.748,87.055)
Image (generated by PyMOL):