ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02473:02474

Extra

PDB:
ATOM 1 O3' U A2472 99.743 109.412 84.062 1.00 37.95 O
ATOM 2 P G A2473 98.984 110.551 84.883 1.00 41.58 P
ATOM 3 OP1 G A2473 99.979 111.612 85.149 1.00 44.22 O
ATOM 4 OP2 G A2473 98.287 109.914 86.013 1.00 42.08 O
ATOM 5 O5' G A2473 97.904 111.119 83.858 1.00 42.52 O
ATOM 6 C5' G A2473 98.310 111.756 82.625 1.00 42.35 C
ATOM 7 C4' G A2473 97.125 111.898 81.697 1.00 41.99 C
ATOM 8 O4' G A2473 96.630 110.582 81.339 1.00 41.75 O
ATOM 9 C3' G A2473 95.925 112.612 82.299 1.00 40.49 C
ATOM 10 O3' G A2473 96.067 114.019 82.149 1.00 39.64 O
ATOM 11 C2' G A2473 94.758 112.048 81.495 1.00 40.16 C
ATOM 12 O2' G A2473 94.609 112.655 80.230 1.00 39.33 O
ATOM 13 C1' G A2473 95.214 110.605 81.273 1.00 40.22 C
ATOM 14 N9 G A2473 94.704 109.629 82.229 1.00 38.64 N
ATOM 15 C8 G A2473 95.217 109.333 83.465 1.00 38.07 C
ATOM 16 N7 G A2473 94.598 108.348 84.052 1.00 38.15 N
ATOM 17 C5 G A2473 93.602 107.986 83.158 1.00 37.43 C
ATOM 18 C6 G A2473 92.628 106.965 83.237 1.00 36.61 C
ATOM 19 O6 G A2473 92.456 106.132 84.137 1.00 38.21 O
ATOM 20 N1 G A2473 91.807 106.957 82.116 1.00 35.00 N
ATOM 21 C2 G A2473 91.916 107.811 81.052 1.00 34.92 C
ATOM 22 N2 G A2473 91.031 107.655 80.066 1.00 34.93 N
ATOM 23 N3 G A2473 92.829 108.753 80.960 1.00 37.82 N
ATOM 24 C4 G A2473 93.636 108.784 82.041 1.00 38.22 C
ATOM 25 P A A2474 95.349 115.006 83.184 1.00 41.25 P
ATOM 26 OP1 A A2474 95.951 116.349 83.031 1.00 40.55 O
ATOM 27 OP2 A A2474 95.362 114.345 84.511 1.00 42.81 O
ATOM 28 O5' A A2474 93.843 115.081 82.677 1.00 39.17 O
TER

ATOM 1 O3' G B2473 96.067 114.019 82.149 1.00 39.64 O
ATOM 2 P A B2474 95.349 115.006 83.184 1.00 41.25 P
ATOM 3 OP1 A B2474 95.951 116.349 83.031 1.00 40.55 O
ATOM 4 OP2 A B2474 95.362 114.345 84.511 1.00 42.81 O
ATOM 5 O5' A B2474 93.843 115.081 82.677 1.00 39.17 O
ATOM 6 C5' A B2474 93.484 115.846 81.514 1.00 36.75 C
ATOM 7 C4' A B2474 92.047 115.579 81.153 1.00 35.50 C
ATOM 8 O4' A B2474 91.899 114.163 80.919 1.00 36.61 O
ATOM 9 C3' A B2474 91.030 115.901 82.236 1.00 34.63 C
ATOM 10 O3' A B2474 90.574 117.228 82.058 1.00 35.56 O
ATOM 11 C2' A B2474 89.888 114.959 81.906 1.00 35.13 C
ATOM 12 O2' A B2474 89.091 115.465 80.858 1.00 36.47 O
ATOM 13 C1' A B2474 90.641 113.734 81.390 1.00 37.25 C
ATOM 14 N9 A B2474 90.862 112.695 82.388 1.00 38.65 N
ATOM 15 C8 A B2474 91.630 112.756 83.518 1.00 39.07 C
ATOM 16 N7 A B2474 91.628 111.649 84.216 1.00 40.76 N
ATOM 17 C5 A B2474 90.801 110.801 83.496 1.00 39.23 C
ATOM 18 C6 A B2474 90.384 109.485 83.713 1.00 38.76 C
ATOM 19 N6 A B2474 90.765 108.757 84.758 1.00 39.81 N
ATOM 20 N1 A B2474 89.550 108.933 82.810 1.00 38.46 N
ATOM 21 C2 A B2474 89.171 109.662 81.761 1.00 37.95 C
ATOM 22 N3 A B2474 89.497 110.907 81.444 1.00 39.48 N
ATOM 23 C4 A B2474 90.325 111.430 82.367 1.00 39.61 C
ATOM 24 P G B2475 90.455 118.222 83.306 1.00 37.49 P
ATOM 25 OP1 G B2475 89.367 119.168 82.947 1.00 36.27 O
ATOM 26 OP2 G B2475 91.804 118.743 83.604 1.00 38.81 O
ATOM 27 O5' G B2475 89.997 117.317 84.537 1.00 37.99 O
TER

Atoms:
OP1: (99.979,111.612,85.149)
OP2: (98.287,109.914,86.013)
C3': (95.925,112.612,82.299)
C1': (95.214,110.605,81.273)
C5': (98.310,111.756,82.625)
O6: (92.456,106.132,84.137)
O4': (96.630,110.582,81.339)
C8: (95.217,109.333,83.465)
C2: (91.916,107.811,81.052)
C6: (92.628,106.965,83.237)
C5: (93.602,107.986,83.158)
C4: (93.636,108.784,82.041)
P: (98.984,110.551,84.883)
C4': (97.125,111.898,81.697)
C2': (94.758,112.048,81.495)
O2': (94.609,112.655,80.230)
N1: (91.807,106.957,82.116)
N2: (91.031,107.655,80.066)
N3: (92.829,108.753,80.960)
N7: (94.598,108.348,84.052)
N9: (94.704,109.629,82.229)
O5': (97.904,111.119,83.858)
O3': (96.067,114.019,82.149)
OP1: (95.951,116.349,83.031)
OP2: (95.362,114.345,84.511)
C3': (91.030,115.901,82.236)
C1': (90.641,113.734,81.390)
C5': (93.484,115.846,81.514)
O4': (91.899,114.163,80.919)
C8: (91.630,112.756,83.518)
O2': (89.091,115.465,80.858)
C6: (90.384,109.485,83.713)
C5: (90.801,110.801,83.496)
C4: (90.325,111.430,82.367)
P: (95.349,115.006,83.184)
C4': (92.047,115.579,81.153)
C2': (89.888,114.959,81.906)
C2: (89.171,109.662,81.761)
N1: (89.550,108.933,82.810)
N3: (89.497,110.907,81.444)
N6: (90.765,108.757,84.758)
N7: (91.628,111.649,84.216)
N9: (90.862,112.695,82.388)
O5': (93.843,115.081,82.677)
O3': (90.574,117.228,82.058)
Image (generated by PyMOL):
PyMOL image
show in jmol