Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0882:0151
Extra
PDB:
ATOM 1 O3' A A 881 59.211 117.475 62.147 1.00 23.70 O
ATOM 2 P A A 882 60.463 117.719 63.117 1.00 27.76 P
ATOM 3 OP1 A A 882 59.937 117.693 64.512 1.00 27.40 O
ATOM 4 OP2 A A 882 61.213 118.908 62.644 1.00 28.22 O
ATOM 5 O5' A A 882 61.375 116.429 62.940 1.00 23.53 O
ATOM 6 C5' A A 882 61.879 116.035 61.659 1.00 22.84 C
ATOM 7 C4' A A 882 63.043 115.095 61.844 1.00 23.75 C
ATOM 8 O4' A A 882 64.179 115.827 62.365 1.00 24.63 O
ATOM 9 C3' A A 882 62.793 113.994 62.859 1.00 22.79 C
ATOM 10 O3' A A 882 62.152 112.902 62.215 1.00 26.96 O
ATOM 11 C2' A A 882 64.202 113.648 63.325 1.00 22.99 C
ATOM 12 O2' A A 882 64.878 112.797 62.424 1.00 25.38 O
ATOM 13 C1' A A 882 64.880 115.023 63.302 1.00 22.65 C
ATOM 14 N9 A A 882 64.887 115.728 64.585 1.00 21.70 N
ATOM 15 C8 A A 882 64.102 116.791 64.949 1.00 21.23 C
ATOM 16 N7 A A 882 64.326 117.221 66.162 1.00 21.47 N
ATOM 17 C5 A A 882 65.324 116.386 66.631 1.00 20.23 C
ATOM 18 C6 A A 882 65.991 116.324 67.858 1.00 22.33 C
ATOM 19 N6 A A 882 65.737 117.151 68.873 1.00 24.56 N
ATOM 20 N1 A A 882 66.938 115.375 68.013 1.00 22.98 N
ATOM 21 C2 A A 882 67.182 114.549 66.994 1.00 22.45 C
ATOM 22 N3 A A 882 66.616 114.507 65.790 1.00 22.24 N
ATOM 23 C4 A A 882 65.684 115.464 65.672 1.00 20.72 C
ATOM 24 P C A 883 60.924 112.144 62.922 1.00 26.87 P
ATOM 25 OP1 C A 883 60.407 111.205 61.903 1.00 28.03 O
ATOM 26 OP2 C A 883 60.012 113.140 63.530 1.00 27.19 O
ATOM 27 O5' C A 883 61.598 111.288 64.086 1.00 24.51 O
TER
ATOM 1 O3' C B 150 69.800 112.127 65.185 1.00 25.17 O
ATOM 2 P U B 151 69.723 110.576 65.608 1.00 27.62 P
ATOM 3 OP1 U B 151 69.176 110.525 66.988 1.00 24.09 O
ATOM 4 OP2 U B 151 71.041 109.955 65.309 1.00 22.94 O
ATOM 5 O5' U B 151 68.645 109.961 64.616 1.00 26.46 O
ATOM 6 C5' U B 151 67.342 110.556 64.489 1.00 26.68 C
ATOM 7 C4' U B 151 66.604 109.938 63.331 1.00 27.85 C
ATOM 8 O4' U B 151 67.313 110.208 62.089 1.00 29.30 O
ATOM 9 C3' U B 151 66.526 108.425 63.365 1.00 28.94 C
ATOM 10 O3' U B 151 65.522 107.971 64.252 1.00 27.48 O
ATOM 11 C2' U B 151 66.270 108.079 61.903 1.00 30.08 C
ATOM 12 O2' U B 151 64.937 108.277 61.475 1.00 31.27 O
ATOM 13 C1' U B 151 67.161 109.105 61.205 1.00 28.41 C
ATOM 14 N1 U B 151 68.489 108.562 60.886 1.00 27.57 N
ATOM 15 C2 U B 151 68.587 107.742 59.773 1.00 27.34 C
ATOM 16 O2 U B 151 67.626 107.432 59.089 1.00 28.97 O
ATOM 17 N3 U B 151 69.850 107.291 59.496 1.00 25.78 N
ATOM 18 C4 U B 151 70.994 107.551 60.207 1.00 27.72 C
ATOM 19 O4 U B 151 72.061 107.082 59.814 1.00 29.99 O
ATOM 20 C5 U B 151 70.810 108.385 61.363 1.00 26.57 C
ATOM 21 C6 U B 151 69.597 108.854 61.652 1.00 24.81 C
ATOM 22 P G B 152 65.723 106.578 65.021 1.00 28.53 P
ATOM 23 OP1 G B 152 64.543 106.490 65.912 1.00 25.49 O
ATOM 24 OP2 G B 152 67.096 106.486 65.592 1.00 23.62 O
ATOM 25 O5' G B 152 65.629 105.483 63.869 1.00 24.16 O
TER
ATOM 2 P A A 882 60.463 117.719 63.117 1.00 27.76 P
ATOM 3 OP1 A A 882 59.937 117.693 64.512 1.00 27.40 O
ATOM 4 OP2 A A 882 61.213 118.908 62.644 1.00 28.22 O
ATOM 5 O5' A A 882 61.375 116.429 62.940 1.00 23.53 O
ATOM 6 C5' A A 882 61.879 116.035 61.659 1.00 22.84 C
ATOM 7 C4' A A 882 63.043 115.095 61.844 1.00 23.75 C
ATOM 8 O4' A A 882 64.179 115.827 62.365 1.00 24.63 O
ATOM 9 C3' A A 882 62.793 113.994 62.859 1.00 22.79 C
ATOM 10 O3' A A 882 62.152 112.902 62.215 1.00 26.96 O
ATOM 11 C2' A A 882 64.202 113.648 63.325 1.00 22.99 C
ATOM 12 O2' A A 882 64.878 112.797 62.424 1.00 25.38 O
ATOM 13 C1' A A 882 64.880 115.023 63.302 1.00 22.65 C
ATOM 14 N9 A A 882 64.887 115.728 64.585 1.00 21.70 N
ATOM 15 C8 A A 882 64.102 116.791 64.949 1.00 21.23 C
ATOM 16 N7 A A 882 64.326 117.221 66.162 1.00 21.47 N
ATOM 17 C5 A A 882 65.324 116.386 66.631 1.00 20.23 C
ATOM 18 C6 A A 882 65.991 116.324 67.858 1.00 22.33 C
ATOM 19 N6 A A 882 65.737 117.151 68.873 1.00 24.56 N
ATOM 20 N1 A A 882 66.938 115.375 68.013 1.00 22.98 N
ATOM 21 C2 A A 882 67.182 114.549 66.994 1.00 22.45 C
ATOM 22 N3 A A 882 66.616 114.507 65.790 1.00 22.24 N
ATOM 23 C4 A A 882 65.684 115.464 65.672 1.00 20.72 C
ATOM 24 P C A 883 60.924 112.144 62.922 1.00 26.87 P
ATOM 25 OP1 C A 883 60.407 111.205 61.903 1.00 28.03 O
ATOM 26 OP2 C A 883 60.012 113.140 63.530 1.00 27.19 O
ATOM 27 O5' C A 883 61.598 111.288 64.086 1.00 24.51 O
TER
ATOM 1 O3' C B 150 69.800 112.127 65.185 1.00 25.17 O
ATOM 2 P U B 151 69.723 110.576 65.608 1.00 27.62 P
ATOM 3 OP1 U B 151 69.176 110.525 66.988 1.00 24.09 O
ATOM 4 OP2 U B 151 71.041 109.955 65.309 1.00 22.94 O
ATOM 5 O5' U B 151 68.645 109.961 64.616 1.00 26.46 O
ATOM 6 C5' U B 151 67.342 110.556 64.489 1.00 26.68 C
ATOM 7 C4' U B 151 66.604 109.938 63.331 1.00 27.85 C
ATOM 8 O4' U B 151 67.313 110.208 62.089 1.00 29.30 O
ATOM 9 C3' U B 151 66.526 108.425 63.365 1.00 28.94 C
ATOM 10 O3' U B 151 65.522 107.971 64.252 1.00 27.48 O
ATOM 11 C2' U B 151 66.270 108.079 61.903 1.00 30.08 C
ATOM 12 O2' U B 151 64.937 108.277 61.475 1.00 31.27 O
ATOM 13 C1' U B 151 67.161 109.105 61.205 1.00 28.41 C
ATOM 14 N1 U B 151 68.489 108.562 60.886 1.00 27.57 N
ATOM 15 C2 U B 151 68.587 107.742 59.773 1.00 27.34 C
ATOM 16 O2 U B 151 67.626 107.432 59.089 1.00 28.97 O
ATOM 17 N3 U B 151 69.850 107.291 59.496 1.00 25.78 N
ATOM 18 C4 U B 151 70.994 107.551 60.207 1.00 27.72 C
ATOM 19 O4 U B 151 72.061 107.082 59.814 1.00 29.99 O
ATOM 20 C5 U B 151 70.810 108.385 61.363 1.00 26.57 C
ATOM 21 C6 U B 151 69.597 108.854 61.652 1.00 24.81 C
ATOM 22 P G B 152 65.723 106.578 65.021 1.00 28.53 P
ATOM 23 OP1 G B 152 64.543 106.490 65.912 1.00 25.49 O
ATOM 24 OP2 G B 152 67.096 106.486 65.592 1.00 23.62 O
ATOM 25 O5' G B 152 65.629 105.483 63.869 1.00 24.16 O
TER
Atoms:
OP1: (59.937,117.693,64.512)
OP2: (61.213,118.908,62.644)
C3': (62.793,113.994,62.859)
C1': (64.880,115.023,63.302)
C5': (61.879,116.035,61.659)
O4': (64.179,115.827,62.365)
C8: (64.102,116.791,64.949)
O2': (64.878,112.797,62.424)
C6: (65.991,116.324,67.858)
C5: (65.324,116.386,66.631)
C4: (65.684,115.464,65.672)
P: (60.463,117.719,63.117)
C4': (63.043,115.095,61.844)
C2': (64.202,113.648,63.325)
C2: (67.182,114.549,66.994)
N1: (66.938,115.375,68.013)
N3: (66.616,114.507,65.790)
N6: (65.737,117.151,68.873)
N7: (64.326,117.221,66.162)
N9: (64.887,115.728,64.585)
O5': (61.375,116.429,62.940)
O3': (62.152,112.902,62.215)
OP2: (61.213,118.908,62.644)
C3': (62.793,113.994,62.859)
C1': (64.880,115.023,63.302)
C5': (61.879,116.035,61.659)
O4': (64.179,115.827,62.365)
C8: (64.102,116.791,64.949)
O2': (64.878,112.797,62.424)
C6: (65.991,116.324,67.858)
C5: (65.324,116.386,66.631)
C4: (65.684,115.464,65.672)
P: (60.463,117.719,63.117)
C4': (63.043,115.095,61.844)
C2': (64.202,113.648,63.325)
C2: (67.182,114.549,66.994)
N1: (66.938,115.375,68.013)
N3: (66.616,114.507,65.790)
N6: (65.737,117.151,68.873)
N7: (64.326,117.221,66.162)
N9: (64.887,115.728,64.585)
O5': (61.375,116.429,62.940)
O3': (62.152,112.902,62.215)
C4: (70.994,107.551,60.207)
N3: (69.850,107.291,59.496)
OP1: (69.176,110.525,66.988)
OP2: (71.041,109.955,65.309)
C2: (68.587,107.742,59.773)
C1': (67.161,109.105,61.205)
C3': (66.526,108.425,63.365)
O5': (68.645,109.961,64.616)
O4': (67.313,110.208,62.089)
C5': (67.342,110.556,64.489)
P: (69.723,110.576,65.608)
C4': (66.604,109.938,63.331)
C2': (66.270,108.079,61.903)
O2': (64.937,108.277,61.475)
N1: (68.489,108.562,60.886)
O4: (72.061,107.082,59.814)
O2: (67.626,107.432,59.089)
C6: (69.597,108.854,61.652)
C5: (70.810,108.385,61.363)
O3': (65.522,107.971,64.252)
N3: (69.850,107.291,59.496)
OP1: (69.176,110.525,66.988)
OP2: (71.041,109.955,65.309)
C2: (68.587,107.742,59.773)
C1': (67.161,109.105,61.205)
C3': (66.526,108.425,63.365)
O5': (68.645,109.961,64.616)
O4': (67.313,110.208,62.089)
C5': (67.342,110.556,64.489)
P: (69.723,110.576,65.608)
C4': (66.604,109.938,63.331)
C2': (66.270,108.079,61.903)
O2': (64.937,108.277,61.475)
N1: (68.489,108.562,60.886)
O4: (72.061,107.082,59.814)
O2: (67.626,107.432,59.089)
C6: (69.597,108.854,61.652)
C5: (70.810,108.385,61.363)
O3': (65.522,107.971,64.252)
Image (generated by PyMOL):