Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0910:0887
Extra
PDB:
ATOM 1 O3' A A 909 62.021 98.677 84.146 1.00 38.50 O
ATOM 2 P A A 910 62.501 100.126 84.613 1.00 40.63 P
ATOM 3 OP1 A A 910 63.775 100.500 83.955 1.00 41.89 O
ATOM 4 OP2 A A 910 62.402 100.144 86.098 1.00 43.27 O
ATOM 5 O5' A A 910 61.346 101.062 84.055 1.00 39.21 O
ATOM 6 C5' A A 910 59.973 100.784 84.371 1.00 33.74 C
ATOM 7 C4' A A 910 59.064 101.566 83.465 1.00 31.48 C
ATOM 8 O4' A A 910 59.352 102.979 83.637 1.00 31.39 O
ATOM 9 C3' A A 910 59.209 101.285 81.971 1.00 27.56 C
ATOM 10 O3' A A 910 57.942 101.514 81.365 1.00 26.56 O
ATOM 11 C2' A A 910 60.187 102.367 81.530 1.00 25.95 C
ATOM 12 O2' A A 910 60.049 102.704 80.173 1.00 24.86 O
ATOM 13 C1' A A 910 59.733 103.537 82.397 1.00 27.90 C
ATOM 14 N9 A A 910 60.735 104.568 82.656 1.00 28.08 N
ATOM 15 C8 A A 910 62.102 104.488 82.589 1.00 26.49 C
ATOM 16 N7 A A 910 62.708 105.608 82.896 1.00 27.52 N
ATOM 17 C5 A A 910 61.671 106.486 83.179 1.00 27.76 C
ATOM 18 C6 A A 910 61.647 107.843 83.564 1.00 29.01 C
ATOM 19 N6 A A 910 62.738 108.603 83.698 1.00 29.35 N
ATOM 20 N1 A A 910 60.444 108.406 83.793 1.00 27.54 N
ATOM 21 C2 A A 910 59.348 107.665 83.616 1.00 27.95 C
ATOM 22 N3 A A 910 59.240 106.399 83.236 1.00 27.26 N
ATOM 23 C4 A A 910 60.452 105.858 83.037 1.00 27.38 C
ATOM 24 P G A 911 57.022 100.273 80.923 1.00 27.52 P
ATOM 25 OP1 G A 911 55.624 100.769 80.918 1.00 27.50 O
ATOM 26 OP2 G A 911 57.377 99.066 81.716 1.00 31.02 O
ATOM 27 O5' G A 911 57.445 99.998 79.420 1.00 27.01 O
TER
ATOM 1 O3' C B 886 57.841 108.803 81.246 1.00 26.81 O
ATOM 2 P U B 887 56.259 108.627 81.446 1.00 26.50 P
ATOM 3 OP1 U B 887 56.079 108.158 82.841 1.00 26.83 O
ATOM 4 OP2 U B 887 55.719 107.823 80.323 1.00 27.15 O
ATOM 5 O5' U B 887 55.686 110.111 81.375 1.00 26.18 O
ATOM 6 C5' U B 887 55.924 111.007 82.462 1.00 26.34 C
ATOM 7 C4' U B 887 55.576 112.429 82.100 1.00 25.70 C
ATOM 8 O4' U B 887 56.366 112.893 80.975 1.00 27.06 O
ATOM 9 C3' U B 887 54.164 112.754 81.660 1.00 24.12 C
ATOM 10 O3' U B 887 53.239 112.762 82.743 1.00 26.48 O
ATOM 11 C2' U B 887 54.370 114.158 81.109 1.00 23.67 C
ATOM 12 O2' U B 887 54.555 115.114 82.126 1.00 21.26 O
ATOM 13 C1' U B 887 55.703 114.000 80.380 1.00 24.10 C
ATOM 14 N1 U B 887 55.483 113.756 78.941 1.00 26.81 N
ATOM 15 C2 U B 887 55.110 114.853 78.177 1.00 26.18 C
ATOM 16 O2 U B 887 55.009 115.977 78.638 1.00 28.83 O
ATOM 17 N3 U B 887 54.854 114.591 76.861 1.00 26.19 N
ATOM 18 C4 U B 887 54.933 113.382 76.225 1.00 28.07 C
ATOM 19 O4 U B 887 54.548 113.302 75.056 1.00 28.15 O
ATOM 20 C5 U B 887 55.359 112.289 77.062 1.00 28.26 C
ATOM 21 C6 U B 887 55.611 112.508 78.361 1.00 25.60 C
ATOM 22 P G B 888 51.675 112.507 82.457 1.00 26.69 P
ATOM 23 OP1 G B 888 50.942 112.688 83.741 1.00 26.83 O
ATOM 24 OP2 G B 888 51.560 111.233 81.724 1.00 25.04 O
ATOM 25 O5' G B 888 51.261 113.696 81.482 1.00 23.55 O
TER
ATOM 2 P A A 910 62.501 100.126 84.613 1.00 40.63 P
ATOM 3 OP1 A A 910 63.775 100.500 83.955 1.00 41.89 O
ATOM 4 OP2 A A 910 62.402 100.144 86.098 1.00 43.27 O
ATOM 5 O5' A A 910 61.346 101.062 84.055 1.00 39.21 O
ATOM 6 C5' A A 910 59.973 100.784 84.371 1.00 33.74 C
ATOM 7 C4' A A 910 59.064 101.566 83.465 1.00 31.48 C
ATOM 8 O4' A A 910 59.352 102.979 83.637 1.00 31.39 O
ATOM 9 C3' A A 910 59.209 101.285 81.971 1.00 27.56 C
ATOM 10 O3' A A 910 57.942 101.514 81.365 1.00 26.56 O
ATOM 11 C2' A A 910 60.187 102.367 81.530 1.00 25.95 C
ATOM 12 O2' A A 910 60.049 102.704 80.173 1.00 24.86 O
ATOM 13 C1' A A 910 59.733 103.537 82.397 1.00 27.90 C
ATOM 14 N9 A A 910 60.735 104.568 82.656 1.00 28.08 N
ATOM 15 C8 A A 910 62.102 104.488 82.589 1.00 26.49 C
ATOM 16 N7 A A 910 62.708 105.608 82.896 1.00 27.52 N
ATOM 17 C5 A A 910 61.671 106.486 83.179 1.00 27.76 C
ATOM 18 C6 A A 910 61.647 107.843 83.564 1.00 29.01 C
ATOM 19 N6 A A 910 62.738 108.603 83.698 1.00 29.35 N
ATOM 20 N1 A A 910 60.444 108.406 83.793 1.00 27.54 N
ATOM 21 C2 A A 910 59.348 107.665 83.616 1.00 27.95 C
ATOM 22 N3 A A 910 59.240 106.399 83.236 1.00 27.26 N
ATOM 23 C4 A A 910 60.452 105.858 83.037 1.00 27.38 C
ATOM 24 P G A 911 57.022 100.273 80.923 1.00 27.52 P
ATOM 25 OP1 G A 911 55.624 100.769 80.918 1.00 27.50 O
ATOM 26 OP2 G A 911 57.377 99.066 81.716 1.00 31.02 O
ATOM 27 O5' G A 911 57.445 99.998 79.420 1.00 27.01 O
TER
ATOM 1 O3' C B 886 57.841 108.803 81.246 1.00 26.81 O
ATOM 2 P U B 887 56.259 108.627 81.446 1.00 26.50 P
ATOM 3 OP1 U B 887 56.079 108.158 82.841 1.00 26.83 O
ATOM 4 OP2 U B 887 55.719 107.823 80.323 1.00 27.15 O
ATOM 5 O5' U B 887 55.686 110.111 81.375 1.00 26.18 O
ATOM 6 C5' U B 887 55.924 111.007 82.462 1.00 26.34 C
ATOM 7 C4' U B 887 55.576 112.429 82.100 1.00 25.70 C
ATOM 8 O4' U B 887 56.366 112.893 80.975 1.00 27.06 O
ATOM 9 C3' U B 887 54.164 112.754 81.660 1.00 24.12 C
ATOM 10 O3' U B 887 53.239 112.762 82.743 1.00 26.48 O
ATOM 11 C2' U B 887 54.370 114.158 81.109 1.00 23.67 C
ATOM 12 O2' U B 887 54.555 115.114 82.126 1.00 21.26 O
ATOM 13 C1' U B 887 55.703 114.000 80.380 1.00 24.10 C
ATOM 14 N1 U B 887 55.483 113.756 78.941 1.00 26.81 N
ATOM 15 C2 U B 887 55.110 114.853 78.177 1.00 26.18 C
ATOM 16 O2 U B 887 55.009 115.977 78.638 1.00 28.83 O
ATOM 17 N3 U B 887 54.854 114.591 76.861 1.00 26.19 N
ATOM 18 C4 U B 887 54.933 113.382 76.225 1.00 28.07 C
ATOM 19 O4 U B 887 54.548 113.302 75.056 1.00 28.15 O
ATOM 20 C5 U B 887 55.359 112.289 77.062 1.00 28.26 C
ATOM 21 C6 U B 887 55.611 112.508 78.361 1.00 25.60 C
ATOM 22 P G B 888 51.675 112.507 82.457 1.00 26.69 P
ATOM 23 OP1 G B 888 50.942 112.688 83.741 1.00 26.83 O
ATOM 24 OP2 G B 888 51.560 111.233 81.724 1.00 25.04 O
ATOM 25 O5' G B 888 51.261 113.696 81.482 1.00 23.55 O
TER
Atoms:
OP1: (63.775,100.500,83.955)
OP2: (62.402,100.144,86.098)
C3': (59.209,101.285,81.971)
C1': (59.733,103.537,82.397)
C5': (59.973,100.784,84.371)
O4': (59.352,102.979,83.637)
C8: (62.102,104.488,82.589)
O2': (60.049,102.704,80.173)
C6: (61.647,107.843,83.564)
C5: (61.671,106.486,83.179)
C4: (60.452,105.858,83.037)
P: (62.501,100.126,84.613)
C4': (59.064,101.566,83.465)
C2': (60.187,102.367,81.530)
C2: (59.348,107.665,83.616)
N1: (60.444,108.406,83.793)
N3: (59.240,106.399,83.236)
N6: (62.738,108.603,83.698)
N7: (62.708,105.608,82.896)
N9: (60.735,104.568,82.656)
O5': (61.346,101.062,84.055)
O3': (57.942,101.514,81.365)
OP2: (62.402,100.144,86.098)
C3': (59.209,101.285,81.971)
C1': (59.733,103.537,82.397)
C5': (59.973,100.784,84.371)
O4': (59.352,102.979,83.637)
C8: (62.102,104.488,82.589)
O2': (60.049,102.704,80.173)
C6: (61.647,107.843,83.564)
C5: (61.671,106.486,83.179)
C4: (60.452,105.858,83.037)
P: (62.501,100.126,84.613)
C4': (59.064,101.566,83.465)
C2': (60.187,102.367,81.530)
C2: (59.348,107.665,83.616)
N1: (60.444,108.406,83.793)
N3: (59.240,106.399,83.236)
N6: (62.738,108.603,83.698)
N7: (62.708,105.608,82.896)
N9: (60.735,104.568,82.656)
O5': (61.346,101.062,84.055)
O3': (57.942,101.514,81.365)
C4: (54.933,113.382,76.225)
N3: (54.854,114.591,76.861)
OP1: (56.079,108.158,82.841)
OP2: (55.719,107.823,80.323)
C2: (55.110,114.853,78.177)
C1': (55.703,114.000,80.380)
C3': (54.164,112.754,81.660)
O5': (55.686,110.111,81.375)
O4': (56.366,112.893,80.975)
C5': (55.924,111.007,82.462)
P: (56.259,108.627,81.446)
C4': (55.576,112.429,82.100)
C2': (54.370,114.158,81.109)
O2': (54.555,115.114,82.126)
N1: (55.483,113.756,78.941)
O4: (54.548,113.302,75.056)
O2: (55.009,115.977,78.638)
C6: (55.611,112.508,78.361)
C5: (55.359,112.289,77.062)
O3': (53.239,112.762,82.743)
N3: (54.854,114.591,76.861)
OP1: (56.079,108.158,82.841)
OP2: (55.719,107.823,80.323)
C2: (55.110,114.853,78.177)
C1': (55.703,114.000,80.380)
C3': (54.164,112.754,81.660)
O5': (55.686,110.111,81.375)
O4': (56.366,112.893,80.975)
C5': (55.924,111.007,82.462)
P: (56.259,108.627,81.446)
C4': (55.576,112.429,82.100)
C2': (54.370,114.158,81.109)
O2': (54.555,115.114,82.126)
N1: (55.483,113.756,78.941)
O4: (54.548,113.302,75.056)
O2: (55.009,115.977,78.638)
C6: (55.611,112.508,78.361)
C5: (55.359,112.289,77.062)
O3': (53.239,112.762,82.743)
Image (generated by PyMOL):