Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0910:0887
Extra
PDB:
ATOM 1 O3' A A 909 62.271 98.716 84.591 1.00 46.22 O
ATOM 2 P A A 910 62.684 100.211 84.966 1.00 48.06 P
ATOM 3 OP1 A A 910 63.951 100.570 84.286 1.00 48.46 O
ATOM 4 OP2 A A 910 62.568 100.327 86.450 1.00 46.92 O
ATOM 5 O5' A A 910 61.524 101.087 84.324 1.00 47.35 O
ATOM 6 C5' A A 910 60.151 100.859 84.678 1.00 43.15 C
ATOM 7 C4' A A 910 59.246 101.686 83.804 1.00 40.42 C
ATOM 8 O4' A A 910 59.551 103.092 84.004 1.00 40.40 O
ATOM 9 C3' A A 910 59.363 101.444 82.304 1.00 37.73 C
ATOM 10 O3' A A 910 58.088 101.717 81.739 1.00 38.19 O
ATOM 11 C2' A A 910 60.348 102.524 81.875 1.00 36.40 C
ATOM 12 O2' A A 910 60.199 102.888 80.526 1.00 37.41 O
ATOM 13 C1' A A 910 59.915 103.679 82.770 1.00 36.98 C
ATOM 14 N9 A A 910 60.920 104.712 83.031 1.00 36.35 N
ATOM 15 C8 A A 910 62.285 104.624 82.992 1.00 35.31 C
ATOM 16 N7 A A 910 62.895 105.745 83.293 1.00 36.18 N
ATOM 17 C5 A A 910 61.861 106.634 83.544 1.00 35.62 C
ATOM 18 C6 A A 910 61.842 107.992 83.915 1.00 35.33 C
ATOM 19 N6 A A 910 62.931 108.737 84.086 1.00 33.85 N
ATOM 20 N1 A A 910 60.640 108.571 84.101 1.00 35.78 N
ATOM 21 C2 A A 910 59.541 107.839 83.913 1.00 34.74 C
ATOM 22 N3 A A 910 59.428 106.568 83.556 1.00 35.77 N
ATOM 23 C4 A A 910 60.640 106.012 83.387 1.00 36.79 C
ATOM 24 P G A 911 57.162 100.512 81.217 1.00 38.08 P
ATOM 25 OP1 G A 911 55.794 101.077 81.092 1.00 37.86 O
ATOM 26 OP2 G A 911 57.386 99.291 82.028 1.00 37.16 O
ATOM 27 O5' G A 911 57.709 100.229 79.755 1.00 35.47 O
TER
ATOM 1 O3' C B 886 58.152 109.050 81.574 1.00 33.77 O
ATOM 2 P U B 887 56.569 108.863 81.748 1.00 32.96 P
ATOM 3 OP1 U B 887 56.314 108.364 83.122 1.00 28.68 O
ATOM 4 OP2 U B 887 56.067 108.096 80.584 1.00 33.59 O
ATOM 5 O5' U B 887 56.005 110.343 81.670 1.00 31.27 O
ATOM 6 C5' U B 887 56.163 111.214 82.784 1.00 34.55 C
ATOM 7 C4' U B 887 55.852 112.635 82.404 1.00 34.69 C
ATOM 8 O4' U B 887 56.610 113.018 81.230 1.00 36.06 O
ATOM 9 C3' U B 887 54.447 112.941 81.950 1.00 34.52 C
ATOM 10 O3' U B 887 53.539 113.001 83.034 1.00 35.39 O
ATOM 11 C2' U B 887 54.651 114.322 81.362 1.00 36.43 C
ATOM 12 O2' U B 887 54.860 115.253 82.403 1.00 39.65 O
ATOM 13 C1' U B 887 55.976 114.131 80.626 1.00 37.01 C
ATOM 14 N1 U B 887 55.791 113.890 79.183 1.00 38.24 N
ATOM 15 C2 U B 887 55.463 114.988 78.407 1.00 38.62 C
ATOM 16 O2 U B 887 55.353 116.112 78.867 1.00 41.76 O
ATOM 17 N3 U B 887 55.264 114.727 77.078 1.00 37.60 N
ATOM 18 C4 U B 887 55.359 113.513 76.447 1.00 38.92 C
ATOM 19 O4 U B 887 55.103 113.442 75.239 1.00 39.40 O
ATOM 20 C5 U B 887 55.721 112.420 77.305 1.00 37.41 C
ATOM 21 C6 U B 887 55.919 112.640 78.611 1.00 37.31 C
ATOM 22 P G B 888 51.990 112.661 82.780 1.00 33.24 P
ATOM 23 OP1 G B 888 51.267 112.739 84.070 1.00 32.34 O
ATOM 24 OP2 G B 888 51.938 111.423 81.979 1.00 34.16 O
ATOM 25 O5' G B 888 51.498 113.845 81.850 1.00 31.09 O
TER
ATOM 2 P A A 910 62.684 100.211 84.966 1.00 48.06 P
ATOM 3 OP1 A A 910 63.951 100.570 84.286 1.00 48.46 O
ATOM 4 OP2 A A 910 62.568 100.327 86.450 1.00 46.92 O
ATOM 5 O5' A A 910 61.524 101.087 84.324 1.00 47.35 O
ATOM 6 C5' A A 910 60.151 100.859 84.678 1.00 43.15 C
ATOM 7 C4' A A 910 59.246 101.686 83.804 1.00 40.42 C
ATOM 8 O4' A A 910 59.551 103.092 84.004 1.00 40.40 O
ATOM 9 C3' A A 910 59.363 101.444 82.304 1.00 37.73 C
ATOM 10 O3' A A 910 58.088 101.717 81.739 1.00 38.19 O
ATOM 11 C2' A A 910 60.348 102.524 81.875 1.00 36.40 C
ATOM 12 O2' A A 910 60.199 102.888 80.526 1.00 37.41 O
ATOM 13 C1' A A 910 59.915 103.679 82.770 1.00 36.98 C
ATOM 14 N9 A A 910 60.920 104.712 83.031 1.00 36.35 N
ATOM 15 C8 A A 910 62.285 104.624 82.992 1.00 35.31 C
ATOM 16 N7 A A 910 62.895 105.745 83.293 1.00 36.18 N
ATOM 17 C5 A A 910 61.861 106.634 83.544 1.00 35.62 C
ATOM 18 C6 A A 910 61.842 107.992 83.915 1.00 35.33 C
ATOM 19 N6 A A 910 62.931 108.737 84.086 1.00 33.85 N
ATOM 20 N1 A A 910 60.640 108.571 84.101 1.00 35.78 N
ATOM 21 C2 A A 910 59.541 107.839 83.913 1.00 34.74 C
ATOM 22 N3 A A 910 59.428 106.568 83.556 1.00 35.77 N
ATOM 23 C4 A A 910 60.640 106.012 83.387 1.00 36.79 C
ATOM 24 P G A 911 57.162 100.512 81.217 1.00 38.08 P
ATOM 25 OP1 G A 911 55.794 101.077 81.092 1.00 37.86 O
ATOM 26 OP2 G A 911 57.386 99.291 82.028 1.00 37.16 O
ATOM 27 O5' G A 911 57.709 100.229 79.755 1.00 35.47 O
TER
ATOM 1 O3' C B 886 58.152 109.050 81.574 1.00 33.77 O
ATOM 2 P U B 887 56.569 108.863 81.748 1.00 32.96 P
ATOM 3 OP1 U B 887 56.314 108.364 83.122 1.00 28.68 O
ATOM 4 OP2 U B 887 56.067 108.096 80.584 1.00 33.59 O
ATOM 5 O5' U B 887 56.005 110.343 81.670 1.00 31.27 O
ATOM 6 C5' U B 887 56.163 111.214 82.784 1.00 34.55 C
ATOM 7 C4' U B 887 55.852 112.635 82.404 1.00 34.69 C
ATOM 8 O4' U B 887 56.610 113.018 81.230 1.00 36.06 O
ATOM 9 C3' U B 887 54.447 112.941 81.950 1.00 34.52 C
ATOM 10 O3' U B 887 53.539 113.001 83.034 1.00 35.39 O
ATOM 11 C2' U B 887 54.651 114.322 81.362 1.00 36.43 C
ATOM 12 O2' U B 887 54.860 115.253 82.403 1.00 39.65 O
ATOM 13 C1' U B 887 55.976 114.131 80.626 1.00 37.01 C
ATOM 14 N1 U B 887 55.791 113.890 79.183 1.00 38.24 N
ATOM 15 C2 U B 887 55.463 114.988 78.407 1.00 38.62 C
ATOM 16 O2 U B 887 55.353 116.112 78.867 1.00 41.76 O
ATOM 17 N3 U B 887 55.264 114.727 77.078 1.00 37.60 N
ATOM 18 C4 U B 887 55.359 113.513 76.447 1.00 38.92 C
ATOM 19 O4 U B 887 55.103 113.442 75.239 1.00 39.40 O
ATOM 20 C5 U B 887 55.721 112.420 77.305 1.00 37.41 C
ATOM 21 C6 U B 887 55.919 112.640 78.611 1.00 37.31 C
ATOM 22 P G B 888 51.990 112.661 82.780 1.00 33.24 P
ATOM 23 OP1 G B 888 51.267 112.739 84.070 1.00 32.34 O
ATOM 24 OP2 G B 888 51.938 111.423 81.979 1.00 34.16 O
ATOM 25 O5' G B 888 51.498 113.845 81.850 1.00 31.09 O
TER
Atoms:
OP1: (63.951,100.570,84.286)
OP2: (62.568,100.327,86.450)
C3': (59.363,101.444,82.304)
C1': (59.915,103.679,82.770)
C5': (60.151,100.859,84.678)
O4': (59.551,103.092,84.004)
C8: (62.285,104.624,82.992)
O2': (60.199,102.888,80.526)
C6: (61.842,107.992,83.915)
C5: (61.861,106.634,83.544)
C4: (60.640,106.012,83.387)
P: (62.684,100.211,84.966)
C4': (59.246,101.686,83.804)
C2': (60.348,102.524,81.875)
C2: (59.541,107.839,83.913)
N1: (60.640,108.571,84.101)
N3: (59.428,106.568,83.556)
N6: (62.931,108.737,84.086)
N7: (62.895,105.745,83.293)
N9: (60.920,104.712,83.031)
O5': (61.524,101.087,84.324)
O3': (58.088,101.717,81.739)
OP2: (62.568,100.327,86.450)
C3': (59.363,101.444,82.304)
C1': (59.915,103.679,82.770)
C5': (60.151,100.859,84.678)
O4': (59.551,103.092,84.004)
C8: (62.285,104.624,82.992)
O2': (60.199,102.888,80.526)
C6: (61.842,107.992,83.915)
C5: (61.861,106.634,83.544)
C4: (60.640,106.012,83.387)
P: (62.684,100.211,84.966)
C4': (59.246,101.686,83.804)
C2': (60.348,102.524,81.875)
C2: (59.541,107.839,83.913)
N1: (60.640,108.571,84.101)
N3: (59.428,106.568,83.556)
N6: (62.931,108.737,84.086)
N7: (62.895,105.745,83.293)
N9: (60.920,104.712,83.031)
O5': (61.524,101.087,84.324)
O3': (58.088,101.717,81.739)
C4: (55.359,113.513,76.447)
N3: (55.264,114.727,77.078)
OP1: (56.314,108.364,83.122)
OP2: (56.067,108.096,80.584)
C2: (55.463,114.988,78.407)
C1': (55.976,114.131,80.626)
C3': (54.447,112.941,81.950)
O5': (56.005,110.343,81.670)
O4': (56.610,113.018,81.230)
C5': (56.163,111.214,82.784)
P: (56.569,108.863,81.748)
C4': (55.852,112.635,82.404)
C2': (54.651,114.322,81.362)
O2': (54.860,115.253,82.403)
N1: (55.791,113.890,79.183)
O4: (55.103,113.442,75.239)
O2: (55.353,116.112,78.867)
C6: (55.919,112.640,78.611)
C5: (55.721,112.420,77.305)
O3': (53.539,113.001,83.034)
N3: (55.264,114.727,77.078)
OP1: (56.314,108.364,83.122)
OP2: (56.067,108.096,80.584)
C2: (55.463,114.988,78.407)
C1': (55.976,114.131,80.626)
C3': (54.447,112.941,81.950)
O5': (56.005,110.343,81.670)
O4': (56.610,113.018,81.230)
C5': (56.163,111.214,82.784)
P: (56.569,108.863,81.748)
C4': (55.852,112.635,82.404)
C2': (54.651,114.322,81.362)
O2': (54.860,115.253,82.403)
N1: (55.791,113.890,79.183)
O4: (55.103,113.442,75.239)
O2: (55.353,116.112,78.867)
C6: (55.919,112.640,78.611)
C5: (55.721,112.420,77.305)
O3': (53.539,113.001,83.034)
Image (generated by PyMOL):