Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0180:0193
Extra
PDB:
ATOM 1 O3' A A 179 71.656 102.032 13.753 1.00 51.89 O
ATOM 2 P A A 180 72.910 101.046 13.603 1.00 54.02 P
ATOM 3 OP1 A A 180 74.086 101.849 13.159 1.00 53.63 O
ATOM 4 OP2 A A 180 72.483 99.864 12.800 1.00 52.06 O
ATOM 5 O5' A A 180 73.183 100.602 15.108 1.00 53.19 O
ATOM 6 C5' A A 180 74.378 99.883 15.459 1.00 52.20 C
ATOM 7 C4' A A 180 74.447 99.676 16.955 1.00 49.71 C
ATOM 8 O4' A A 180 73.185 99.146 17.438 1.00 47.94 O
ATOM 9 C3' A A 180 75.511 98.687 17.409 1.00 48.35 C
ATOM 10 O3' A A 180 75.912 99.027 18.737 1.00 48.92 O
ATOM 11 C2' A A 180 74.723 97.388 17.445 1.00 46.23 C
ATOM 12 O2' A A 180 75.332 96.425 18.270 1.00 47.49 O
ATOM 13 C1' A A 180 73.398 97.884 18.023 1.00 46.55 C
ATOM 14 N9 A A 180 72.209 97.072 17.768 1.00 47.88 N
ATOM 15 C8 A A 180 72.047 96.000 16.928 1.00 48.72 C
ATOM 16 N7 A A 180 70.836 95.502 16.935 1.00 48.17 N
ATOM 17 C5 A A 180 70.155 96.299 17.838 1.00 48.39 C
ATOM 18 C6 A A 180 68.827 96.294 18.280 1.00 50.37 C
ATOM 19 N6 A A 180 67.907 95.424 17.849 1.00 51.31 N
ATOM 20 N1 A A 180 68.464 97.227 19.187 1.00 51.91 N
ATOM 21 C2 A A 180 69.386 98.104 19.608 1.00 50.99 C
ATOM 22 N3 A A 180 70.661 98.212 19.261 1.00 49.86 N
ATOM 23 C4 A A 180 70.987 97.268 18.361 1.00 48.45 C
ATOM 24 P A A 181 77.116 100.064 18.978 1.00 48.74 P
ATOM 25 OP1 A A 181 76.845 100.712 20.281 1.00 48.60 O
ATOM 26 OP2 A A 181 77.289 100.900 17.765 1.00 49.07 O
ATOM 27 O5' A A 181 78.403 99.143 19.131 1.00 47.20 O
TER
ATOM 1 O3' A B 192 67.586 100.951 19.888 1.00 48.72 O
ATOM 2 P U B 193 66.666 100.929 21.205 1.00 48.49 P
ATOM 3 OP1 U B 193 67.449 100.200 22.239 1.00 48.28 O
ATOM 4 OP2 U B 193 65.295 100.468 20.863 1.00 47.41 O
ATOM 5 O5' U B 193 66.530 102.468 21.584 1.00 46.95 O
ATOM 6 C5' U B 193 67.688 103.307 21.703 1.00 44.84 C
ATOM 7 C4' U B 193 67.278 104.696 22.106 1.00 42.34 C
ATOM 8 O4' U B 193 66.564 105.354 21.028 1.00 42.91 O
ATOM 9 C3' U B 193 66.283 104.730 23.238 1.00 42.13 C
ATOM 10 O3' U B 193 66.901 104.491 24.478 1.00 43.36 O
ATOM 11 C2' U B 193 65.678 106.114 23.088 1.00 41.14 C
ATOM 12 O2' U B 193 66.533 107.136 23.542 1.00 42.36 O
ATOM 13 C1' U B 193 65.566 106.208 21.569 1.00 41.42 C
ATOM 14 N1 U B 193 64.250 105.758 21.094 1.00 41.38 N
ATOM 15 C2 U B 193 63.205 106.676 21.117 1.00 43.77 C
ATOM 16 O2 U B 193 63.334 107.829 21.495 1.00 46.29 O
ATOM 17 N3 U B 193 62.000 106.194 20.683 1.00 43.90 N
ATOM 18 C4 U B 193 61.738 104.924 20.234 1.00 44.18 C
ATOM 19 O4 U B 193 60.598 104.641 19.871 1.00 47.22 O
ATOM 20 C5 U B 193 62.866 104.040 20.234 1.00 42.18 C
ATOM 21 C6 U B 193 64.051 104.477 20.652 1.00 39.49 C
ATOM 22 P G B 194 65.989 104.248 25.769 1.00 44.26 P
ATOM 23 OP1 G B 194 66.750 103.400 26.719 1.00 43.78 O
ATOM 24 OP2 G B 194 64.610 103.847 25.356 1.00 42.02 O
ATOM 25 O5' G B 194 65.894 105.703 26.379 1.00 42.78 O
TER
ATOM 2 P A A 180 72.910 101.046 13.603 1.00 54.02 P
ATOM 3 OP1 A A 180 74.086 101.849 13.159 1.00 53.63 O
ATOM 4 OP2 A A 180 72.483 99.864 12.800 1.00 52.06 O
ATOM 5 O5' A A 180 73.183 100.602 15.108 1.00 53.19 O
ATOM 6 C5' A A 180 74.378 99.883 15.459 1.00 52.20 C
ATOM 7 C4' A A 180 74.447 99.676 16.955 1.00 49.71 C
ATOM 8 O4' A A 180 73.185 99.146 17.438 1.00 47.94 O
ATOM 9 C3' A A 180 75.511 98.687 17.409 1.00 48.35 C
ATOM 10 O3' A A 180 75.912 99.027 18.737 1.00 48.92 O
ATOM 11 C2' A A 180 74.723 97.388 17.445 1.00 46.23 C
ATOM 12 O2' A A 180 75.332 96.425 18.270 1.00 47.49 O
ATOM 13 C1' A A 180 73.398 97.884 18.023 1.00 46.55 C
ATOM 14 N9 A A 180 72.209 97.072 17.768 1.00 47.88 N
ATOM 15 C8 A A 180 72.047 96.000 16.928 1.00 48.72 C
ATOM 16 N7 A A 180 70.836 95.502 16.935 1.00 48.17 N
ATOM 17 C5 A A 180 70.155 96.299 17.838 1.00 48.39 C
ATOM 18 C6 A A 180 68.827 96.294 18.280 1.00 50.37 C
ATOM 19 N6 A A 180 67.907 95.424 17.849 1.00 51.31 N
ATOM 20 N1 A A 180 68.464 97.227 19.187 1.00 51.91 N
ATOM 21 C2 A A 180 69.386 98.104 19.608 1.00 50.99 C
ATOM 22 N3 A A 180 70.661 98.212 19.261 1.00 49.86 N
ATOM 23 C4 A A 180 70.987 97.268 18.361 1.00 48.45 C
ATOM 24 P A A 181 77.116 100.064 18.978 1.00 48.74 P
ATOM 25 OP1 A A 181 76.845 100.712 20.281 1.00 48.60 O
ATOM 26 OP2 A A 181 77.289 100.900 17.765 1.00 49.07 O
ATOM 27 O5' A A 181 78.403 99.143 19.131 1.00 47.20 O
TER
ATOM 1 O3' A B 192 67.586 100.951 19.888 1.00 48.72 O
ATOM 2 P U B 193 66.666 100.929 21.205 1.00 48.49 P
ATOM 3 OP1 U B 193 67.449 100.200 22.239 1.00 48.28 O
ATOM 4 OP2 U B 193 65.295 100.468 20.863 1.00 47.41 O
ATOM 5 O5' U B 193 66.530 102.468 21.584 1.00 46.95 O
ATOM 6 C5' U B 193 67.688 103.307 21.703 1.00 44.84 C
ATOM 7 C4' U B 193 67.278 104.696 22.106 1.00 42.34 C
ATOM 8 O4' U B 193 66.564 105.354 21.028 1.00 42.91 O
ATOM 9 C3' U B 193 66.283 104.730 23.238 1.00 42.13 C
ATOM 10 O3' U B 193 66.901 104.491 24.478 1.00 43.36 O
ATOM 11 C2' U B 193 65.678 106.114 23.088 1.00 41.14 C
ATOM 12 O2' U B 193 66.533 107.136 23.542 1.00 42.36 O
ATOM 13 C1' U B 193 65.566 106.208 21.569 1.00 41.42 C
ATOM 14 N1 U B 193 64.250 105.758 21.094 1.00 41.38 N
ATOM 15 C2 U B 193 63.205 106.676 21.117 1.00 43.77 C
ATOM 16 O2 U B 193 63.334 107.829 21.495 1.00 46.29 O
ATOM 17 N3 U B 193 62.000 106.194 20.683 1.00 43.90 N
ATOM 18 C4 U B 193 61.738 104.924 20.234 1.00 44.18 C
ATOM 19 O4 U B 193 60.598 104.641 19.871 1.00 47.22 O
ATOM 20 C5 U B 193 62.866 104.040 20.234 1.00 42.18 C
ATOM 21 C6 U B 193 64.051 104.477 20.652 1.00 39.49 C
ATOM 22 P G B 194 65.989 104.248 25.769 1.00 44.26 P
ATOM 23 OP1 G B 194 66.750 103.400 26.719 1.00 43.78 O
ATOM 24 OP2 G B 194 64.610 103.847 25.356 1.00 42.02 O
ATOM 25 O5' G B 194 65.894 105.703 26.379 1.00 42.78 O
TER
Atoms:
OP1: (74.086,101.849,13.159)
OP2: (72.483,99.864,12.800)
C3': (75.511,98.687,17.409)
C1': (73.398,97.884,18.023)
C5': (74.378,99.883,15.459)
O4': (73.185,99.146,17.438)
C8: (72.047,96.000,16.928)
O2': (75.332,96.425,18.270)
C6: (68.827,96.294,18.280)
C5: (70.155,96.299,17.838)
C4: (70.987,97.268,18.361)
P: (72.910,101.046,13.603)
C4': (74.447,99.676,16.955)
C2': (74.723,97.388,17.445)
C2: (69.386,98.104,19.608)
N1: (68.464,97.227,19.187)
N3: (70.661,98.212,19.261)
N6: (67.907,95.424,17.849)
N7: (70.836,95.502,16.935)
N9: (72.209,97.072,17.768)
O5': (73.183,100.602,15.108)
O3': (75.912,99.027,18.737)
OP2: (72.483,99.864,12.800)
C3': (75.511,98.687,17.409)
C1': (73.398,97.884,18.023)
C5': (74.378,99.883,15.459)
O4': (73.185,99.146,17.438)
C8: (72.047,96.000,16.928)
O2': (75.332,96.425,18.270)
C6: (68.827,96.294,18.280)
C5: (70.155,96.299,17.838)
C4: (70.987,97.268,18.361)
P: (72.910,101.046,13.603)
C4': (74.447,99.676,16.955)
C2': (74.723,97.388,17.445)
C2: (69.386,98.104,19.608)
N1: (68.464,97.227,19.187)
N3: (70.661,98.212,19.261)
N6: (67.907,95.424,17.849)
N7: (70.836,95.502,16.935)
N9: (72.209,97.072,17.768)
O5': (73.183,100.602,15.108)
O3': (75.912,99.027,18.737)
C4: (61.738,104.924,20.234)
N3: (62.000,106.194,20.683)
OP1: (67.449,100.200,22.239)
OP2: (65.295,100.468,20.863)
C2: (63.205,106.676,21.117)
C1': (65.566,106.208,21.569)
C3': (66.283,104.730,23.238)
O5': (66.530,102.468,21.584)
O4': (66.564,105.354,21.028)
C5': (67.688,103.307,21.703)
P: (66.666,100.929,21.205)
C4': (67.278,104.696,22.106)
C2': (65.678,106.114,23.088)
O2': (66.533,107.136,23.542)
N1: (64.250,105.758,21.094)
O4: (60.598,104.641,19.871)
O2: (63.334,107.829,21.495)
C6: (64.051,104.477,20.652)
C5: (62.866,104.040,20.234)
O3': (66.901,104.491,24.478)
N3: (62.000,106.194,20.683)
OP1: (67.449,100.200,22.239)
OP2: (65.295,100.468,20.863)
C2: (63.205,106.676,21.117)
C1': (65.566,106.208,21.569)
C3': (66.283,104.730,23.238)
O5': (66.530,102.468,21.584)
O4': (66.564,105.354,21.028)
C5': (67.688,103.307,21.703)
P: (66.666,100.929,21.205)
C4': (67.278,104.696,22.106)
C2': (65.678,106.114,23.088)
O2': (66.533,107.136,23.542)
N1: (64.250,105.758,21.094)
O4: (60.598,104.641,19.871)
O2: (63.334,107.829,21.495)
C6: (64.051,104.477,20.652)
C5: (62.866,104.040,20.234)
O3': (66.901,104.491,24.478)
Image (generated by PyMOL):