Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0910:0887
Extra
PDB:
ATOM 1 O3' A A 909 62.104 98.724 84.157 1.00 41.50 O
ATOM 2 P A A 910 62.532 100.167 84.671 1.00 41.77 P
ATOM 3 OP1 A A 910 63.846 100.541 84.098 1.00 43.06 O
ATOM 4 OP2 A A 910 62.344 100.155 86.143 1.00 41.46 O
ATOM 5 O5' A A 910 61.408 101.105 84.051 1.00 41.89 O
ATOM 6 C5' A A 910 60.023 100.856 84.341 1.00 39.47 C
ATOM 7 C4' A A 910 59.140 101.642 83.413 1.00 36.80 C
ATOM 8 O4' A A 910 59.410 103.049 83.613 1.00 35.98 O
ATOM 9 C3' A A 910 59.317 101.381 81.922 1.00 35.11 C
ATOM 10 O3' A A 910 58.050 101.561 81.294 1.00 35.34 O
ATOM 11 C2' A A 910 60.281 102.487 81.507 1.00 34.00 C
ATOM 12 O2' A A 910 60.167 102.851 80.150 1.00 32.03 O
ATOM 13 C1' A A 910 59.804 103.633 82.392 1.00 35.98 C
ATOM 14 N9 A A 910 60.797 104.661 82.690 1.00 37.17 N
ATOM 15 C8 A A 910 62.165 104.571 82.712 1.00 36.74 C
ATOM 16 N7 A A 910 62.759 105.687 83.049 1.00 37.90 N
ATOM 17 C5 A A 910 61.712 106.574 83.255 1.00 37.48 C
ATOM 18 C6 A A 910 61.677 107.922 83.638 1.00 37.27 C
ATOM 19 N6 A A 910 62.762 108.655 83.878 1.00 38.65 N
ATOM 20 N1 A A 910 60.471 108.504 83.765 1.00 37.42 N
ATOM 21 C2 A A 910 59.381 107.776 83.517 1.00 38.09 C
ATOM 22 N3 A A 910 59.284 106.508 83.147 1.00 36.81 N
ATOM 23 C4 A A 910 60.501 105.956 83.034 1.00 37.23 C
ATOM 24 P G A 911 57.167 100.280 80.882 1.00 35.96 P
ATOM 25 OP1 G A 911 55.750 100.712 80.905 1.00 35.01 O
ATOM 26 OP2 G A 911 57.585 99.086 81.684 1.00 35.67 O
ATOM 27 O5' G A 911 57.580 100.014 79.368 1.00 33.28 O
TER
ATOM 1 O3' C B 886 57.856 108.841 81.209 1.00 30.61 O
ATOM 2 P U B 887 56.271 108.637 81.354 1.00 30.53 P
ATOM 3 OP1 U B 887 56.054 108.081 82.709 1.00 26.66 O
ATOM 4 OP2 U B 887 55.787 107.887 80.161 1.00 29.12 O
ATOM 5 O5' U B 887 55.692 110.119 81.339 1.00 29.84 O
ATOM 6 C5' U B 887 55.968 110.992 82.439 1.00 32.96 C
ATOM 7 C4' U B 887 55.646 112.427 82.103 1.00 33.60 C
ATOM 8 O4' U B 887 56.416 112.875 80.958 1.00 34.74 O
ATOM 9 C3' U B 887 54.236 112.762 81.672 1.00 34.00 C
ATOM 10 O3' U B 887 53.301 112.756 82.737 1.00 33.23 O
ATOM 11 C2' U B 887 54.440 114.164 81.119 1.00 34.45 C
ATOM 12 O2' U B 887 54.620 115.120 82.146 1.00 33.43 O
ATOM 13 C1' U B 887 55.755 113.984 80.362 1.00 35.03 C
ATOM 14 N1 U B 887 55.516 113.718 78.932 1.00 37.00 N
ATOM 15 C2 U B 887 55.110 114.794 78.151 1.00 37.53 C
ATOM 16 O2 U B 887 55.000 115.927 78.592 1.00 40.05 O
ATOM 17 N3 U B 887 54.845 114.499 76.838 1.00 36.59 N
ATOM 18 C4 U B 887 54.954 113.273 76.226 1.00 37.41 C
ATOM 19 O4 U B 887 54.642 113.167 75.041 1.00 38.04 O
ATOM 20 C5 U B 887 55.407 112.211 77.082 1.00 36.98 C
ATOM 21 C6 U B 887 55.665 112.462 78.374 1.00 37.01 C
ATOM 22 P G B 888 51.758 112.453 82.417 1.00 33.65 P
ATOM 23 OP1 G B 888 50.987 112.561 83.683 1.00 31.78 O
ATOM 24 OP2 G B 888 51.699 111.200 81.622 1.00 33.73 O
ATOM 25 O5' G B 888 51.327 113.654 81.471 1.00 29.78 O
TER
ATOM 2 P A A 910 62.532 100.167 84.671 1.00 41.77 P
ATOM 3 OP1 A A 910 63.846 100.541 84.098 1.00 43.06 O
ATOM 4 OP2 A A 910 62.344 100.155 86.143 1.00 41.46 O
ATOM 5 O5' A A 910 61.408 101.105 84.051 1.00 41.89 O
ATOM 6 C5' A A 910 60.023 100.856 84.341 1.00 39.47 C
ATOM 7 C4' A A 910 59.140 101.642 83.413 1.00 36.80 C
ATOM 8 O4' A A 910 59.410 103.049 83.613 1.00 35.98 O
ATOM 9 C3' A A 910 59.317 101.381 81.922 1.00 35.11 C
ATOM 10 O3' A A 910 58.050 101.561 81.294 1.00 35.34 O
ATOM 11 C2' A A 910 60.281 102.487 81.507 1.00 34.00 C
ATOM 12 O2' A A 910 60.167 102.851 80.150 1.00 32.03 O
ATOM 13 C1' A A 910 59.804 103.633 82.392 1.00 35.98 C
ATOM 14 N9 A A 910 60.797 104.661 82.690 1.00 37.17 N
ATOM 15 C8 A A 910 62.165 104.571 82.712 1.00 36.74 C
ATOM 16 N7 A A 910 62.759 105.687 83.049 1.00 37.90 N
ATOM 17 C5 A A 910 61.712 106.574 83.255 1.00 37.48 C
ATOM 18 C6 A A 910 61.677 107.922 83.638 1.00 37.27 C
ATOM 19 N6 A A 910 62.762 108.655 83.878 1.00 38.65 N
ATOM 20 N1 A A 910 60.471 108.504 83.765 1.00 37.42 N
ATOM 21 C2 A A 910 59.381 107.776 83.517 1.00 38.09 C
ATOM 22 N3 A A 910 59.284 106.508 83.147 1.00 36.81 N
ATOM 23 C4 A A 910 60.501 105.956 83.034 1.00 37.23 C
ATOM 24 P G A 911 57.167 100.280 80.882 1.00 35.96 P
ATOM 25 OP1 G A 911 55.750 100.712 80.905 1.00 35.01 O
ATOM 26 OP2 G A 911 57.585 99.086 81.684 1.00 35.67 O
ATOM 27 O5' G A 911 57.580 100.014 79.368 1.00 33.28 O
TER
ATOM 1 O3' C B 886 57.856 108.841 81.209 1.00 30.61 O
ATOM 2 P U B 887 56.271 108.637 81.354 1.00 30.53 P
ATOM 3 OP1 U B 887 56.054 108.081 82.709 1.00 26.66 O
ATOM 4 OP2 U B 887 55.787 107.887 80.161 1.00 29.12 O
ATOM 5 O5' U B 887 55.692 110.119 81.339 1.00 29.84 O
ATOM 6 C5' U B 887 55.968 110.992 82.439 1.00 32.96 C
ATOM 7 C4' U B 887 55.646 112.427 82.103 1.00 33.60 C
ATOM 8 O4' U B 887 56.416 112.875 80.958 1.00 34.74 O
ATOM 9 C3' U B 887 54.236 112.762 81.672 1.00 34.00 C
ATOM 10 O3' U B 887 53.301 112.756 82.737 1.00 33.23 O
ATOM 11 C2' U B 887 54.440 114.164 81.119 1.00 34.45 C
ATOM 12 O2' U B 887 54.620 115.120 82.146 1.00 33.43 O
ATOM 13 C1' U B 887 55.755 113.984 80.362 1.00 35.03 C
ATOM 14 N1 U B 887 55.516 113.718 78.932 1.00 37.00 N
ATOM 15 C2 U B 887 55.110 114.794 78.151 1.00 37.53 C
ATOM 16 O2 U B 887 55.000 115.927 78.592 1.00 40.05 O
ATOM 17 N3 U B 887 54.845 114.499 76.838 1.00 36.59 N
ATOM 18 C4 U B 887 54.954 113.273 76.226 1.00 37.41 C
ATOM 19 O4 U B 887 54.642 113.167 75.041 1.00 38.04 O
ATOM 20 C5 U B 887 55.407 112.211 77.082 1.00 36.98 C
ATOM 21 C6 U B 887 55.665 112.462 78.374 1.00 37.01 C
ATOM 22 P G B 888 51.758 112.453 82.417 1.00 33.65 P
ATOM 23 OP1 G B 888 50.987 112.561 83.683 1.00 31.78 O
ATOM 24 OP2 G B 888 51.699 111.200 81.622 1.00 33.73 O
ATOM 25 O5' G B 888 51.327 113.654 81.471 1.00 29.78 O
TER
Atoms:
OP1: (63.846,100.541,84.098)
OP2: (62.344,100.155,86.143)
C3': (59.317,101.381,81.922)
C1': (59.804,103.633,82.392)
C5': (60.023,100.856,84.341)
O4': (59.410,103.049,83.613)
C8: (62.165,104.571,82.712)
O2': (60.167,102.851,80.150)
C6: (61.677,107.922,83.638)
C5: (61.712,106.574,83.255)
C4: (60.501,105.956,83.034)
P: (62.532,100.167,84.671)
C4': (59.140,101.642,83.413)
C2': (60.281,102.487,81.507)
C2: (59.381,107.776,83.517)
N1: (60.471,108.504,83.765)
N3: (59.284,106.508,83.147)
N6: (62.762,108.655,83.878)
N7: (62.759,105.687,83.049)
N9: (60.797,104.661,82.690)
O5': (61.408,101.105,84.051)
O3': (58.050,101.561,81.294)
OP2: (62.344,100.155,86.143)
C3': (59.317,101.381,81.922)
C1': (59.804,103.633,82.392)
C5': (60.023,100.856,84.341)
O4': (59.410,103.049,83.613)
C8: (62.165,104.571,82.712)
O2': (60.167,102.851,80.150)
C6: (61.677,107.922,83.638)
C5: (61.712,106.574,83.255)
C4: (60.501,105.956,83.034)
P: (62.532,100.167,84.671)
C4': (59.140,101.642,83.413)
C2': (60.281,102.487,81.507)
C2: (59.381,107.776,83.517)
N1: (60.471,108.504,83.765)
N3: (59.284,106.508,83.147)
N6: (62.762,108.655,83.878)
N7: (62.759,105.687,83.049)
N9: (60.797,104.661,82.690)
O5': (61.408,101.105,84.051)
O3': (58.050,101.561,81.294)
C4: (54.954,113.273,76.226)
N3: (54.845,114.499,76.838)
OP1: (56.054,108.081,82.709)
OP2: (55.787,107.887,80.161)
C2: (55.110,114.794,78.151)
C1': (55.755,113.984,80.362)
C3': (54.236,112.762,81.672)
O5': (55.692,110.119,81.339)
O4': (56.416,112.875,80.958)
C5': (55.968,110.992,82.439)
P: (56.271,108.637,81.354)
C4': (55.646,112.427,82.103)
C2': (54.440,114.164,81.119)
O2': (54.620,115.120,82.146)
N1: (55.516,113.718,78.932)
O4: (54.642,113.167,75.041)
O2: (55.000,115.927,78.592)
C6: (55.665,112.462,78.374)
C5: (55.407,112.211,77.082)
O3': (53.301,112.756,82.737)
N3: (54.845,114.499,76.838)
OP1: (56.054,108.081,82.709)
OP2: (55.787,107.887,80.161)
C2: (55.110,114.794,78.151)
C1': (55.755,113.984,80.362)
C3': (54.236,112.762,81.672)
O5': (55.692,110.119,81.339)
O4': (56.416,112.875,80.958)
C5': (55.968,110.992,82.439)
P: (56.271,108.637,81.354)
C4': (55.646,112.427,82.103)
C2': (54.440,114.164,81.119)
O2': (54.620,115.120,82.146)
N1: (55.516,113.718,78.932)
O4: (54.642,113.167,75.041)
O2: (55.000,115.927,78.592)
C6: (55.665,112.462,78.374)
C5: (55.407,112.211,77.082)
O3': (53.301,112.756,82.737)
Image (generated by PyMOL):