Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1617:A1909
Extra
PDB:
ATOM 1 O3' C A1616 -6.771 104.348 154.342 1.00 11.61 O
ATOM 2 P A A1617 -5.258 103.900 154.070 1.00 15.03 P
ATOM 3 OP1 A A1617 -4.397 105.101 153.998 1.00 51.16 O
ATOM 4 OP2 A A1617 -5.244 102.929 152.943 1.00 51.16 O
ATOM 5 O5' A A1617 -4.880 103.102 155.386 1.00 1.61 O
ATOM 6 C5' A A1617 -4.991 103.712 156.678 1.00 1.61 C
ATOM 7 C4' A A1617 -4.748 102.681 157.754 1.00 1.61 C
ATOM 8 O4' A A1617 -5.871 101.771 157.801 1.00 1.61 O
ATOM 9 C3' A A1617 -3.537 101.799 157.502 1.00 1.61 C
ATOM 10 O3' A A1617 -2.344 102.374 157.984 1.00 1.61 O
ATOM 11 C2' A A1617 -3.894 100.536 158.253 1.00 1.61 C
ATOM 12 O2' A A1617 -3.625 100.649 159.632 1.00 1.61 O
ATOM 13 C1' A A1617 -5.403 100.454 158.011 1.00 1.61 C
ATOM 14 N9 A A1617 -5.681 99.666 156.804 1.00 45.52 N
ATOM 15 C8 A A1617 -5.687 100.101 155.501 1.00 45.52 C
ATOM 16 N7 A A1617 -5.900 99.150 154.627 1.00 45.52 N
ATOM 17 C5 A A1617 -6.062 98.015 155.405 1.00 45.52 C
ATOM 18 C6 A A1617 -6.310 96.681 155.076 1.00 45.52 C
ATOM 19 N6 A A1617 -6.429 96.241 153.825 1.00 45.52 N
ATOM 20 N1 A A1617 -6.427 95.797 156.084 1.00 45.52 N
ATOM 21 C2 A A1617 -6.294 96.236 157.333 1.00 45.52 C
ATOM 22 N3 A A1617 -6.052 97.463 157.770 1.00 45.52 N
ATOM 23 C4 A A1617 -5.945 98.318 156.744 1.00 45.52 C
ATOM 24 P A A1618 -0.945 101.960 157.319 1.00 10.96 P
ATOM 25 OP1 A A1618 0.164 102.613 158.072 1.00 20.17 O
ATOM 26 OP2 A A1618 -1.050 102.162 155.850 1.00 20.17 O
ATOM 27 O5' A A1618 -0.886 100.400 157.589 1.00 23.96 O
TER
ATOM 1 O3' G B1908 -4.181 93.126 160.599 1.00 26.59 O
ATOM 2 P U B1909 -4.896 94.463 161.150 1.00 20.14 P
ATOM 3 OP1 U B1909 -4.335 95.567 160.334 1.00 20.14 O
ATOM 4 OP2 U B1909 -4.816 94.544 162.627 1.00 20.14 O
ATOM 5 O5' U B1909 -6.427 94.381 160.764 1.00 4.63 O
ATOM 6 C5' U B1909 -7.210 95.525 161.012 1.00 4.63 C
ATOM 7 C4' U B1909 -8.625 95.345 160.564 1.00 4.63 C
ATOM 8 O4' U B1909 -8.691 95.066 159.152 1.00 4.63 O
ATOM 9 C3' U B1909 -9.477 94.275 161.195 1.00 4.63 C
ATOM 10 O3' U B1909 -9.991 94.717 162.426 1.00 4.63 O
ATOM 11 C2' U B1909 -10.619 94.195 160.199 1.00 4.63 C
ATOM 12 O2' U B1909 -11.533 95.259 160.375 1.00 4.63 O
ATOM 13 C1' U B1909 -9.894 94.385 158.869 1.00 4.63 C
ATOM 14 N1 U B1909 -9.566 93.085 158.267 1.00 15.57 N
ATOM 15 C2 U B1909 -10.605 92.321 157.807 1.00 15.57 C
ATOM 16 O2 U B1909 -11.768 92.691 157.842 1.00 15.57 O
ATOM 17 N3 U B1909 -10.244 91.105 157.308 1.00 15.57 N
ATOM 18 C4 U B1909 -8.973 90.587 157.219 1.00 15.57 C
ATOM 19 O4 U B1909 -8.815 89.422 156.849 1.00 15.57 O
ATOM 20 C5 U B1909 -7.953 91.450 157.686 1.00 15.57 C
ATOM 21 C6 U B1909 -8.276 92.639 158.183 1.00 15.57 C
ATOM 22 P C B1910 -10.646 93.661 163.434 1.00 3.18 P
ATOM 23 OP1 C B1910 -11.598 94.350 164.366 1.00 3.76 O
ATOM 24 OP2 C B1910 -9.490 92.890 163.985 1.00 3.76 O
ATOM 25 O5' C B1910 -11.511 92.737 162.481 1.00 3.90 O
TER
ATOM 2 P A A1617 -5.258 103.900 154.070 1.00 15.03 P
ATOM 3 OP1 A A1617 -4.397 105.101 153.998 1.00 51.16 O
ATOM 4 OP2 A A1617 -5.244 102.929 152.943 1.00 51.16 O
ATOM 5 O5' A A1617 -4.880 103.102 155.386 1.00 1.61 O
ATOM 6 C5' A A1617 -4.991 103.712 156.678 1.00 1.61 C
ATOM 7 C4' A A1617 -4.748 102.681 157.754 1.00 1.61 C
ATOM 8 O4' A A1617 -5.871 101.771 157.801 1.00 1.61 O
ATOM 9 C3' A A1617 -3.537 101.799 157.502 1.00 1.61 C
ATOM 10 O3' A A1617 -2.344 102.374 157.984 1.00 1.61 O
ATOM 11 C2' A A1617 -3.894 100.536 158.253 1.00 1.61 C
ATOM 12 O2' A A1617 -3.625 100.649 159.632 1.00 1.61 O
ATOM 13 C1' A A1617 -5.403 100.454 158.011 1.00 1.61 C
ATOM 14 N9 A A1617 -5.681 99.666 156.804 1.00 45.52 N
ATOM 15 C8 A A1617 -5.687 100.101 155.501 1.00 45.52 C
ATOM 16 N7 A A1617 -5.900 99.150 154.627 1.00 45.52 N
ATOM 17 C5 A A1617 -6.062 98.015 155.405 1.00 45.52 C
ATOM 18 C6 A A1617 -6.310 96.681 155.076 1.00 45.52 C
ATOM 19 N6 A A1617 -6.429 96.241 153.825 1.00 45.52 N
ATOM 20 N1 A A1617 -6.427 95.797 156.084 1.00 45.52 N
ATOM 21 C2 A A1617 -6.294 96.236 157.333 1.00 45.52 C
ATOM 22 N3 A A1617 -6.052 97.463 157.770 1.00 45.52 N
ATOM 23 C4 A A1617 -5.945 98.318 156.744 1.00 45.52 C
ATOM 24 P A A1618 -0.945 101.960 157.319 1.00 10.96 P
ATOM 25 OP1 A A1618 0.164 102.613 158.072 1.00 20.17 O
ATOM 26 OP2 A A1618 -1.050 102.162 155.850 1.00 20.17 O
ATOM 27 O5' A A1618 -0.886 100.400 157.589 1.00 23.96 O
TER
ATOM 1 O3' G B1908 -4.181 93.126 160.599 1.00 26.59 O
ATOM 2 P U B1909 -4.896 94.463 161.150 1.00 20.14 P
ATOM 3 OP1 U B1909 -4.335 95.567 160.334 1.00 20.14 O
ATOM 4 OP2 U B1909 -4.816 94.544 162.627 1.00 20.14 O
ATOM 5 O5' U B1909 -6.427 94.381 160.764 1.00 4.63 O
ATOM 6 C5' U B1909 -7.210 95.525 161.012 1.00 4.63 C
ATOM 7 C4' U B1909 -8.625 95.345 160.564 1.00 4.63 C
ATOM 8 O4' U B1909 -8.691 95.066 159.152 1.00 4.63 O
ATOM 9 C3' U B1909 -9.477 94.275 161.195 1.00 4.63 C
ATOM 10 O3' U B1909 -9.991 94.717 162.426 1.00 4.63 O
ATOM 11 C2' U B1909 -10.619 94.195 160.199 1.00 4.63 C
ATOM 12 O2' U B1909 -11.533 95.259 160.375 1.00 4.63 O
ATOM 13 C1' U B1909 -9.894 94.385 158.869 1.00 4.63 C
ATOM 14 N1 U B1909 -9.566 93.085 158.267 1.00 15.57 N
ATOM 15 C2 U B1909 -10.605 92.321 157.807 1.00 15.57 C
ATOM 16 O2 U B1909 -11.768 92.691 157.842 1.00 15.57 O
ATOM 17 N3 U B1909 -10.244 91.105 157.308 1.00 15.57 N
ATOM 18 C4 U B1909 -8.973 90.587 157.219 1.00 15.57 C
ATOM 19 O4 U B1909 -8.815 89.422 156.849 1.00 15.57 O
ATOM 20 C5 U B1909 -7.953 91.450 157.686 1.00 15.57 C
ATOM 21 C6 U B1909 -8.276 92.639 158.183 1.00 15.57 C
ATOM 22 P C B1910 -10.646 93.661 163.434 1.00 3.18 P
ATOM 23 OP1 C B1910 -11.598 94.350 164.366 1.00 3.76 O
ATOM 24 OP2 C B1910 -9.490 92.890 163.985 1.00 3.76 O
ATOM 25 O5' C B1910 -11.511 92.737 162.481 1.00 3.90 O
TER
Atoms:
OP1: (-4.397,105.101,153.998)
OP2: (-5.244,102.929,152.943)
C3': (-3.537,101.799,157.502)
C1': (-5.403,100.454,158.011)
C5': (-4.991,103.712,156.678)
O4': (-5.871,101.771,157.801)
C8: (-5.687,100.101,155.501)
O2': (-3.625,100.649,159.632)
C6: (-6.310,96.681,155.076)
C5: (-6.062,98.015,155.405)
C4: (-5.945,98.318,156.744)
P: (-5.258,103.900,154.070)
C4': (-4.748,102.681,157.754)
C2': (-3.894,100.536,158.253)
C2: (-6.294,96.236,157.333)
N1: (-6.427,95.797,156.084)
N3: (-6.052,97.463,157.770)
N6: (-6.429,96.241,153.825)
N7: (-5.900,99.150,154.627)
N9: (-5.681,99.666,156.804)
O5': (-4.880,103.102,155.386)
O3': (-2.344,102.374,157.984)
OP2: (-5.244,102.929,152.943)
C3': (-3.537,101.799,157.502)
C1': (-5.403,100.454,158.011)
C5': (-4.991,103.712,156.678)
O4': (-5.871,101.771,157.801)
C8: (-5.687,100.101,155.501)
O2': (-3.625,100.649,159.632)
C6: (-6.310,96.681,155.076)
C5: (-6.062,98.015,155.405)
C4: (-5.945,98.318,156.744)
P: (-5.258,103.900,154.070)
C4': (-4.748,102.681,157.754)
C2': (-3.894,100.536,158.253)
C2: (-6.294,96.236,157.333)
N1: (-6.427,95.797,156.084)
N3: (-6.052,97.463,157.770)
N6: (-6.429,96.241,153.825)
N7: (-5.900,99.150,154.627)
N9: (-5.681,99.666,156.804)
O5': (-4.880,103.102,155.386)
O3': (-2.344,102.374,157.984)
C4: (-8.973,90.587,157.219)
N3: (-10.244,91.105,157.308)
OP1: (-4.335,95.567,160.334)
OP2: (-4.816,94.544,162.627)
C2: (-10.605,92.321,157.807)
C1': (-9.894,94.385,158.869)
C3': (-9.477,94.275,161.195)
O5': (-6.427,94.381,160.764)
O4': (-8.691,95.066,159.152)
C5': (-7.210,95.525,161.012)
P: (-4.896,94.463,161.150)
C4': (-8.625,95.345,160.564)
C2': (-10.619,94.195,160.199)
O2': (-11.533,95.259,160.375)
N1: (-9.566,93.085,158.267)
O4: (-8.815,89.422,156.849)
O2: (-11.768,92.691,157.842)
C6: (-8.276,92.639,158.183)
C5: (-7.953,91.450,157.686)
O3': (-9.991,94.717,162.426)
N3: (-10.244,91.105,157.308)
OP1: (-4.335,95.567,160.334)
OP2: (-4.816,94.544,162.627)
C2: (-10.605,92.321,157.807)
C1': (-9.894,94.385,158.869)
C3': (-9.477,94.275,161.195)
O5': (-6.427,94.381,160.764)
O4': (-8.691,95.066,159.152)
C5': (-7.210,95.525,161.012)
P: (-4.896,94.463,161.150)
C4': (-8.625,95.345,160.564)
C2': (-10.619,94.195,160.199)
O2': (-11.533,95.259,160.375)
N1: (-9.566,93.085,158.267)
O4: (-8.815,89.422,156.849)
O2: (-11.768,92.691,157.842)
C6: (-8.276,92.639,158.183)
C5: (-7.953,91.450,157.686)
O3': (-9.991,94.717,162.426)
Image (generated by PyMOL):