ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A177:A836

Extra

PDB:
ATOM 1 O3' A A 176 -39.360 162.395 164.316 1.00 0.79 O
ATOM 2 P A A 177 -40.267 161.470 165.253 1.00 35.19 P
ATOM 3 OP1 A A 177 -41.694 161.892 165.059 1.00 12.89 O
ATOM 4 OP2 A A 177 -39.662 161.521 166.606 1.00 12.89 O
ATOM 5 O5' A A 177 -40.085 159.996 164.656 1.00 16.10 O
ATOM 6 C5' A A 177 -40.428 158.825 165.446 1.00 16.10 C
ATOM 7 C4' A A 177 -39.179 158.243 166.040 1.00 16.10 C
ATOM 8 O4' A A 177 -39.413 157.836 167.400 1.00 16.10 O
ATOM 9 C3' A A 177 -38.484 157.085 165.329 1.00 16.10 C
ATOM 10 O3' A A 177 -37.116 157.370 165.103 1.00 16.10 O
ATOM 11 C2' A A 177 -38.565 155.950 166.346 1.00 16.10 C
ATOM 12 O2' A A 177 -37.395 155.153 166.360 1.00 16.10 O
ATOM 13 C1' A A 177 -38.634 156.707 167.666 1.00 16.10 C
ATOM 14 N9 A A 177 -39.257 155.946 168.738 1.00 14.91 N
ATOM 15 C8 A A 177 -38.746 155.714 169.978 1.00 14.91 C
ATOM 16 N7 A A 177 -39.489 154.933 170.717 1.00 14.91 N
ATOM 17 C5 A A 177 -40.569 154.644 169.906 1.00 14.91 C
ATOM 18 C6 A A 177 -41.693 153.838 170.096 1.00 14.91 C
ATOM 19 N6 A A 177 -41.916 153.122 171.196 1.00 14.91 N
ATOM 20 N1 A A 177 -42.589 153.774 169.101 1.00 14.91 N
ATOM 21 C2 A A 177 -42.347 154.464 167.980 1.00 14.91 C
ATOM 22 N3 A A 177 -41.309 155.244 167.675 1.00 14.91 N
ATOM 23 C4 A A 177 -40.450 155.287 168.696 1.00 14.91 C
ATOM 24 P A A 178 -36.549 157.367 163.604 1.00 15.84 P
ATOM 25 OP1 A A 178 -35.185 157.994 163.601 1.00 20.01 O
ATOM 26 OP2 A A 178 -37.644 157.906 162.713 1.00 20.01 O
ATOM 27 O5' A A 178 -36.292 155.839 163.265 1.00 0.79 O
TER

ATOM 1 O3' U B 835 -43.196 150.486 163.744 1.00 10.22 O
ATOM 2 P U B 836 -43.377 151.177 165.179 1.00 19.84 P
ATOM 3 OP1 U B 836 -43.352 152.654 164.997 1.00 30.68 O
ATOM 4 OP2 U B 836 -42.412 150.518 166.096 1.00 30.68 O
ATOM 5 O5' U B 836 -44.841 150.778 165.626 1.00 2.23 O
ATOM 6 C5' U B 836 -45.332 151.155 166.909 1.00 2.23 C
ATOM 7 C4' U B 836 -46.343 150.143 167.376 1.00 2.23 C
ATOM 8 O4' U B 836 -47.470 150.161 166.478 1.00 2.23 O
ATOM 9 C3' U B 836 -45.864 148.703 167.369 1.00 2.23 C
ATOM 10 O3' U B 836 -45.247 148.436 168.631 1.00 2.23 O
ATOM 11 C2' U B 836 -47.153 147.900 167.182 1.00 2.23 C
ATOM 12 O2' U B 836 -47.729 147.526 168.416 1.00 2.23 O
ATOM 13 C1' U B 836 -48.078 148.897 166.464 1.00 2.23 C
ATOM 14 N1 U B 836 -48.476 148.606 165.081 1.00 42.58 N
ATOM 15 C2 U B 836 -47.485 148.426 164.145 1.00 42.58 C
ATOM 16 O2 U B 836 -46.296 148.506 164.417 1.00 42.58 O
ATOM 17 N3 U B 836 -47.926 148.159 162.877 1.00 42.58 N
ATOM 18 C4 U B 836 -49.224 148.064 162.463 1.00 42.58 C
ATOM 19 O4 U B 836 -49.460 147.794 161.287 1.00 42.58 O
ATOM 20 C5 U B 836 -50.193 148.275 163.492 1.00 42.58 C
ATOM 21 C6 U B 836 -49.793 148.527 164.735 1.00 42.58 C
ATOM 22 P A B 837 -44.087 147.328 168.747 1.00 34.99 P
ATOM 23 OP1 A B 837 -43.277 147.647 169.953 1.00 64.39 O
ATOM 24 OP2 A B 837 -43.404 147.185 167.435 1.00 64.39 O
ATOM 25 O5' A B 837 -44.905 146.006 169.069 1.00 31.39 O
TER

Atoms:
OP1: (-41.694,161.892,165.059)
OP2: (-39.662,161.521,166.606)
C3': (-38.484,157.085,165.329)
C1': (-38.634,156.707,167.666)
C5': (-40.428,158.825,165.446)
O4': (-39.413,157.836,167.400)
C8: (-38.746,155.714,169.978)
O2': (-37.395,155.153,166.360)
C6: (-41.693,153.838,170.096)
C5: (-40.569,154.644,169.906)
C4: (-40.450,155.287,168.696)
P: (-40.267,161.470,165.253)
C4': (-39.179,158.243,166.040)
C2': (-38.565,155.950,166.346)
C2: (-42.347,154.464,167.980)
N1: (-42.589,153.774,169.101)
N3: (-41.309,155.244,167.675)
N6: (-41.916,153.122,171.196)
N7: (-39.489,154.933,170.717)
N9: (-39.257,155.946,168.738)
O5': (-40.085,159.996,164.656)
O3': (-37.116,157.370,165.103)
C4: (-49.224,148.064,162.463)
N3: (-47.926,148.159,162.877)
OP1: (-43.352,152.654,164.997)
OP2: (-42.412,150.518,166.096)
C2: (-47.485,148.426,164.145)
C1': (-48.078,148.897,166.464)
C3': (-45.864,148.703,167.369)
O5': (-44.841,150.778,165.626)
O4': (-47.470,150.161,166.478)
C5': (-45.332,151.155,166.909)
P: (-43.377,151.177,165.179)
C4': (-46.343,150.143,167.376)
C2': (-47.153,147.900,167.182)
O2': (-47.729,147.526,168.416)
N1: (-48.476,148.606,165.081)
O4: (-49.460,147.794,161.287)
O2: (-46.296,148.506,164.417)
C6: (-49.793,148.527,164.735)
C5: (-50.193,148.275,163.492)
O3': (-45.247,148.436,168.631)
Image (generated by PyMOL):
PyMOL image
show in jmol