ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:W34:A767

Extra

PDB:
ATOM 1 O3' G A 33 -117.709 26.663 14.241 1.00153.24 O
ATOM 2 P A A 34 -118.101 25.899 15.599 1.00103.77 P
ATOM 3 OP1 A A 34 -119.553 25.606 15.539 1.00101.86 O
ATOM 4 OP2 A A 34 -117.558 26.667 16.744 1.00101.12 O
ATOM 5 O5' A A 34 -117.302 24.525 15.496 1.00148.50 O
ATOM 6 C5' A A 34 -117.530 23.622 14.395 1.00147.33 C
ATOM 7 C4' A A 34 -116.483 22.532 14.384 1.00146.22 C
ATOM 8 O4' A A 34 -115.196 23.081 14.006 1.00142.93 O
ATOM 9 C3' A A 34 -116.241 21.849 15.719 1.00146.50 C
ATOM 10 O3' A A 34 -117.196 20.818 15.940 1.00150.90 O
ATOM 11 C2' A A 34 -114.813 21.327 15.579 1.00143.10 C
ATOM 12 O2' A A 34 -114.741 20.086 14.897 1.00144.86 O
ATOM 13 C1' A A 34 -114.165 22.413 14.714 1.00137.38 C
ATOM 14 N9 A A 34 -113.403 23.414 15.465 1.00 90.81 N
ATOM 15 C8 A A 34 -113.846 24.628 15.933 1.00 89.03 C
ATOM 16 N7 A A 34 -112.922 25.331 16.542 1.00 83.47 N
ATOM 17 C5 A A 34 -111.794 24.525 16.479 1.00 82.62 C
ATOM 18 C6 A A 34 -110.470 24.706 16.936 1.00 84.49 C
ATOM 19 N6 A A 34 -110.039 25.807 17.562 1.00 84.77 N
ATOM 20 N1 A A 34 -109.592 23.706 16.719 1.00 83.00 N
ATOM 21 C2 A A 34 -110.019 22.608 16.076 1.00 83.95 C
ATOM 22 N3 A A 34 -111.227 22.326 15.592 1.00 82.41 N
ATOM 23 C4 A A 34 -112.079 23.335 15.829 1.00 85.23 C
ATOM 24 P A A 35 -117.885 20.665 17.385 1.00103.21 P
ATOM 25 OP1 A A 35 -119.130 19.868 17.188 1.00101.03 O
ATOM 26 OP2 A A 35 -117.959 22.004 18.029 1.00102.20 O
ATOM 27 O5' A A 35 -116.839 19.794 18.212 1.00173.94 O
TER

ATOM 1 O3' U B 766 -105.408 19.394 15.726 1.00 32.46 O
ATOM 2 P U B 767 -106.792 18.715 15.295 1.00 28.68 P
ATOM 3 OP1 U B 767 -107.761 19.810 15.063 1.00 33.75 O
ATOM 4 OP2 U B 767 -107.126 17.626 16.256 1.00 35.19 O
ATOM 5 O5' U B 767 -106.451 18.062 13.888 1.00 27.91 O
ATOM 6 C5' U B 767 -106.103 18.895 12.776 1.00 25.74 C
ATOM 7 C4' U B 767 -105.811 18.054 11.560 1.00 23.94 C
ATOM 8 O4' U B 767 -104.520 17.412 11.696 1.00 24.27 O
ATOM 9 C3' U B 767 -106.790 16.925 11.285 1.00 24.72 C
ATOM 10 O3' U B 767 -107.914 17.369 10.544 1.00 25.92 O
ATOM 11 C2' U B 767 -105.953 15.967 10.458 1.00 24.77 C
ATOM 12 O2' U B 767 -105.913 16.373 9.108 1.00 25.93 O
ATOM 13 C1' U B 767 -104.563 16.142 11.076 1.00 25.69 C
ATOM 14 N1 U B 767 -104.274 15.109 12.083 1.00 37.59 N
ATOM 15 C2 U B 767 -103.607 13.977 11.658 1.00 38.46 C
ATOM 16 O2 U B 767 -103.249 13.810 10.506 1.00 38.08 O
ATOM 17 N3 U B 767 -103.377 13.042 12.634 1.00 39.18 N
ATOM 18 C4 U B 767 -103.735 13.115 13.959 1.00 38.03 C
ATOM 19 O4 U B 767 -103.452 12.179 14.713 1.00 41.35 O
ATOM 20 C5 U B 767 -104.420 14.315 14.325 1.00 36.55 C
ATOM 21 C6 U B 767 -104.659 15.248 13.400 1.00 36.97 C
ATOM 22 P A B 768 -109.302 16.577 10.665 1.00 30.29 P
ATOM 23 OP1 A B 768 -110.340 17.346 9.938 1.00 49.48 O
ATOM 24 OP2 A B 768 -109.514 16.213 12.088 1.00 49.07 O
ATOM 25 O5' A B 768 -109.061 15.223 9.875 1.00 47.18 O
TER

Atoms:
OP1: (-119.553,25.606,15.539)
OP2: (-117.558,26.667,16.744)
C3': (-116.241,21.849,15.719)
C1': (-114.165,22.413,14.714)
C5': (-117.530,23.622,14.395)
O4': (-115.196,23.081,14.006)
C8: (-113.846,24.628,15.933)
O2': (-114.741,20.086,14.897)
C6: (-110.470,24.706,16.936)
C5: (-111.794,24.525,16.479)
C4: (-112.079,23.335,15.829)
P: (-118.101,25.899,15.599)
C4': (-116.483,22.532,14.384)
C2': (-114.813,21.327,15.579)
C2: (-110.019,22.608,16.076)
N1: (-109.592,23.706,16.719)
N3: (-111.227,22.326,15.592)
N6: (-110.039,25.807,17.562)
N7: (-112.922,25.331,16.542)
N9: (-113.403,23.414,15.465)
O5': (-117.302,24.525,15.496)
O3': (-117.196,20.818,15.940)
C4: (-103.735,13.115,13.959)
N3: (-103.377,13.042,12.634)
OP1: (-107.761,19.810,15.063)
OP2: (-107.126,17.626,16.256)
C2: (-103.607,13.977,11.658)
C1': (-104.563,16.142,11.076)
C3': (-106.790,16.925,11.285)
O5': (-106.451,18.062,13.888)
O4': (-104.520,17.412,11.696)
C5': (-106.103,18.895,12.776)
P: (-106.792,18.715,15.295)
C4': (-105.811,18.054,11.560)
C2': (-105.953,15.967,10.458)
O2': (-105.913,16.373,9.108)
N1: (-104.274,15.109,12.083)
O4: (-103.452,12.179,14.713)
O2: (-103.249,13.810,10.506)
C6: (-104.659,15.248,13.400)
C5: (-104.420,14.315,14.325)
O3': (-107.914,17.369,10.544)
Image (generated by PyMOL):
PyMOL image
show in jmol