Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0567:0568
Extra
PDB:
ATOM 1 O3' C A 566 5.975 87.810 138.683 1.00 63.86 O
ATOM 2 P G A 567 5.091 88.335 137.447 1.00 63.72 P
ATOM 3 OP1 G A 567 3.872 88.994 138.000 1.00 61.86 O
ATOM 4 OP2 G A 567 4.953 87.203 136.481 1.00 61.95 O
ATOM 5 O5' G A 567 5.986 89.475 136.783 1.00 63.23 O
ATOM 6 C5' G A 567 6.353 90.661 137.522 1.00 60.32 C
ATOM 7 C4' G A 567 7.465 91.398 136.806 1.00 59.62 C
ATOM 8 O4' G A 567 8.618 90.524 136.706 1.00 58.32 O
ATOM 9 C3' G A 567 7.166 91.822 135.373 1.00 58.36 C
ATOM 10 O3' G A 567 6.526 93.103 135.380 1.00 55.92 O
ATOM 11 C2' G A 567 8.556 91.873 134.747 1.00 57.56 C
ATOM 12 O2' G A 567 9.256 93.051 135.092 1.00 59.50 O
ATOM 13 C1' G A 567 9.258 90.719 135.463 1.00 56.70 C
ATOM 14 N9 G A 567 9.304 89.434 134.775 1.00 55.11 N
ATOM 15 C8 G A 567 8.283 88.530 134.625 1.00 54.09 C
ATOM 16 N7 G A 567 8.661 87.426 134.037 1.00 54.22 N
ATOM 17 C5 G A 567 10.008 87.619 133.766 1.00 52.21 C
ATOM 18 C6 G A 567 10.962 86.757 133.151 1.00 51.94 C
ATOM 19 O6 G A 567 10.801 85.611 132.715 1.00 50.26 O
ATOM 20 N1 G A 567 12.215 87.355 133.073 1.00 51.56 N
ATOM 21 C2 G A 567 12.517 88.617 133.524 1.00 53.69 C
ATOM 22 N2 G A 567 13.786 89.022 133.356 1.00 53.19 N
ATOM 23 N3 G A 567 11.642 89.426 134.101 1.00 54.00 N
ATOM 24 C4 G A 567 10.415 88.863 134.192 1.00 53.95 C
ATOM 25 P A A 568 5.522 93.511 134.195 1.00 56.56 P
ATOM 26 OP1 A A 568 4.760 94.691 134.673 1.00 55.37 O
ATOM 27 OP2 A A 568 4.791 92.308 133.711 1.00 55.17 O
ATOM 28 O5' A A 568 6.476 93.990 133.012 1.00 57.73 O
TER
ATOM 1 O3' G B 567 6.526 93.103 135.380 1.00 55.92 O
ATOM 2 P A B 568 5.522 93.511 134.195 1.00 56.56 P
ATOM 3 OP1 A B 568 4.760 94.691 134.673 1.00 55.37 O
ATOM 4 OP2 A B 568 4.791 92.308 133.711 1.00 55.17 O
ATOM 5 O5' A B 568 6.476 93.990 133.012 1.00 57.73 O
ATOM 6 C5' A B 568 7.195 95.240 133.086 1.00 55.84 C
ATOM 7 C4' A B 568 8.295 95.266 132.049 1.00 55.14 C
ATOM 8 O4' A B 568 9.220 94.179 132.313 1.00 54.90 O
ATOM 9 C3' A B 568 7.857 95.025 130.614 1.00 55.79 C
ATOM 10 O3' A B 568 7.388 96.223 130.000 1.00 56.43 O
ATOM 11 C2' A B 568 9.143 94.534 129.964 1.00 55.98 C
ATOM 12 O2' A B 568 10.027 95.589 129.636 1.00 57.59 O
ATOM 13 C1' A B 568 9.756 93.704 131.095 1.00 55.02 C
ATOM 14 N9 A B 568 9.484 92.274 130.989 1.00 54.28 N
ATOM 15 C8 A B 568 8.284 91.619 131.117 1.00 55.02 C
ATOM 16 N7 A B 568 8.368 90.324 130.930 1.00 54.73 N
ATOM 17 C5 A B 568 9.714 90.110 130.669 1.00 52.96 C
ATOM 18 C6 A B 568 10.453 88.945 130.381 1.00 53.20 C
ATOM 19 N6 A B 568 9.919 87.722 130.301 1.00 52.77 N
ATOM 20 N1 A B 568 11.782 89.081 130.173 1.00 54.31 N
ATOM 21 C2 A B 568 12.324 90.305 130.253 1.00 53.85 C
ATOM 22 N3 A B 568 11.735 91.471 130.515 1.00 55.24 N
ATOM 23 C4 A B 568 10.414 91.302 130.712 1.00 54.11 C
ATOM 24 P G B 569 5.965 96.237 129.258 1.00 56.16 P
ATOM 25 OP1 G B 569 6.041 97.217 128.139 1.00 59.34 O
ATOM 26 OP2 G B 569 4.927 96.397 130.291 1.00 59.38 O
ATOM 27 O5' G B 569 5.822 94.762 128.679 1.00 54.94 O
TER
ATOM 2 P G A 567 5.091 88.335 137.447 1.00 63.72 P
ATOM 3 OP1 G A 567 3.872 88.994 138.000 1.00 61.86 O
ATOM 4 OP2 G A 567 4.953 87.203 136.481 1.00 61.95 O
ATOM 5 O5' G A 567 5.986 89.475 136.783 1.00 63.23 O
ATOM 6 C5' G A 567 6.353 90.661 137.522 1.00 60.32 C
ATOM 7 C4' G A 567 7.465 91.398 136.806 1.00 59.62 C
ATOM 8 O4' G A 567 8.618 90.524 136.706 1.00 58.32 O
ATOM 9 C3' G A 567 7.166 91.822 135.373 1.00 58.36 C
ATOM 10 O3' G A 567 6.526 93.103 135.380 1.00 55.92 O
ATOM 11 C2' G A 567 8.556 91.873 134.747 1.00 57.56 C
ATOM 12 O2' G A 567 9.256 93.051 135.092 1.00 59.50 O
ATOM 13 C1' G A 567 9.258 90.719 135.463 1.00 56.70 C
ATOM 14 N9 G A 567 9.304 89.434 134.775 1.00 55.11 N
ATOM 15 C8 G A 567 8.283 88.530 134.625 1.00 54.09 C
ATOM 16 N7 G A 567 8.661 87.426 134.037 1.00 54.22 N
ATOM 17 C5 G A 567 10.008 87.619 133.766 1.00 52.21 C
ATOM 18 C6 G A 567 10.962 86.757 133.151 1.00 51.94 C
ATOM 19 O6 G A 567 10.801 85.611 132.715 1.00 50.26 O
ATOM 20 N1 G A 567 12.215 87.355 133.073 1.00 51.56 N
ATOM 21 C2 G A 567 12.517 88.617 133.524 1.00 53.69 C
ATOM 22 N2 G A 567 13.786 89.022 133.356 1.00 53.19 N
ATOM 23 N3 G A 567 11.642 89.426 134.101 1.00 54.00 N
ATOM 24 C4 G A 567 10.415 88.863 134.192 1.00 53.95 C
ATOM 25 P A A 568 5.522 93.511 134.195 1.00 56.56 P
ATOM 26 OP1 A A 568 4.760 94.691 134.673 1.00 55.37 O
ATOM 27 OP2 A A 568 4.791 92.308 133.711 1.00 55.17 O
ATOM 28 O5' A A 568 6.476 93.990 133.012 1.00 57.73 O
TER
ATOM 1 O3' G B 567 6.526 93.103 135.380 1.00 55.92 O
ATOM 2 P A B 568 5.522 93.511 134.195 1.00 56.56 P
ATOM 3 OP1 A B 568 4.760 94.691 134.673 1.00 55.37 O
ATOM 4 OP2 A B 568 4.791 92.308 133.711 1.00 55.17 O
ATOM 5 O5' A B 568 6.476 93.990 133.012 1.00 57.73 O
ATOM 6 C5' A B 568 7.195 95.240 133.086 1.00 55.84 C
ATOM 7 C4' A B 568 8.295 95.266 132.049 1.00 55.14 C
ATOM 8 O4' A B 568 9.220 94.179 132.313 1.00 54.90 O
ATOM 9 C3' A B 568 7.857 95.025 130.614 1.00 55.79 C
ATOM 10 O3' A B 568 7.388 96.223 130.000 1.00 56.43 O
ATOM 11 C2' A B 568 9.143 94.534 129.964 1.00 55.98 C
ATOM 12 O2' A B 568 10.027 95.589 129.636 1.00 57.59 O
ATOM 13 C1' A B 568 9.756 93.704 131.095 1.00 55.02 C
ATOM 14 N9 A B 568 9.484 92.274 130.989 1.00 54.28 N
ATOM 15 C8 A B 568 8.284 91.619 131.117 1.00 55.02 C
ATOM 16 N7 A B 568 8.368 90.324 130.930 1.00 54.73 N
ATOM 17 C5 A B 568 9.714 90.110 130.669 1.00 52.96 C
ATOM 18 C6 A B 568 10.453 88.945 130.381 1.00 53.20 C
ATOM 19 N6 A B 568 9.919 87.722 130.301 1.00 52.77 N
ATOM 20 N1 A B 568 11.782 89.081 130.173 1.00 54.31 N
ATOM 21 C2 A B 568 12.324 90.305 130.253 1.00 53.85 C
ATOM 22 N3 A B 568 11.735 91.471 130.515 1.00 55.24 N
ATOM 23 C4 A B 568 10.414 91.302 130.712 1.00 54.11 C
ATOM 24 P G B 569 5.965 96.237 129.258 1.00 56.16 P
ATOM 25 OP1 G B 569 6.041 97.217 128.139 1.00 59.34 O
ATOM 26 OP2 G B 569 4.927 96.397 130.291 1.00 59.38 O
ATOM 27 O5' G B 569 5.822 94.762 128.679 1.00 54.94 O
TER
Atoms:
OP1: (3.872,88.994,138.000)
OP2: (4.953,87.203,136.481)
C3': (7.166,91.822,135.373)
C1': (9.258,90.719,135.463)
C5': (6.353,90.661,137.522)
O6: (10.801,85.611,132.715)
O4': (8.618,90.524,136.706)
C8: (8.283,88.530,134.625)
C2: (12.517,88.617,133.524)
C6: (10.962,86.757,133.151)
C5: (10.008,87.619,133.766)
C4: (10.415,88.863,134.192)
P: (5.091,88.335,137.447)
C4': (7.465,91.398,136.806)
C2': (8.556,91.873,134.747)
O2': (9.256,93.051,135.092)
N1: (12.215,87.355,133.073)
N2: (13.786,89.022,133.356)
N3: (11.642,89.426,134.101)
N7: (8.661,87.426,134.037)
N9: (9.304,89.434,134.775)
O5': (5.986,89.475,136.783)
O3': (6.526,93.103,135.380)
OP2: (4.953,87.203,136.481)
C3': (7.166,91.822,135.373)
C1': (9.258,90.719,135.463)
C5': (6.353,90.661,137.522)
O6: (10.801,85.611,132.715)
O4': (8.618,90.524,136.706)
C8: (8.283,88.530,134.625)
C2: (12.517,88.617,133.524)
C6: (10.962,86.757,133.151)
C5: (10.008,87.619,133.766)
C4: (10.415,88.863,134.192)
P: (5.091,88.335,137.447)
C4': (7.465,91.398,136.806)
C2': (8.556,91.873,134.747)
O2': (9.256,93.051,135.092)
N1: (12.215,87.355,133.073)
N2: (13.786,89.022,133.356)
N3: (11.642,89.426,134.101)
N7: (8.661,87.426,134.037)
N9: (9.304,89.434,134.775)
O5': (5.986,89.475,136.783)
O3': (6.526,93.103,135.380)
OP1: (4.760,94.691,134.673)
OP2: (4.791,92.308,133.711)
C3': (7.857,95.025,130.614)
C1': (9.756,93.704,131.095)
C5': (7.195,95.240,133.086)
O4': (9.220,94.179,132.313)
C8: (8.284,91.619,131.117)
O2': (10.027,95.589,129.636)
C6: (10.453,88.945,130.381)
C5: (9.714,90.110,130.669)
C4: (10.414,91.302,130.712)
P: (5.522,93.511,134.195)
C4': (8.295,95.266,132.049)
C2': (9.143,94.534,129.964)
C2: (12.324,90.305,130.253)
N1: (11.782,89.081,130.173)
N3: (11.735,91.471,130.515)
N6: (9.919,87.722,130.301)
N7: (8.368,90.324,130.930)
N9: (9.484,92.274,130.989)
O5': (6.476,93.990,133.012)
O3': (7.388,96.223,130.000)
OP2: (4.791,92.308,133.711)
C3': (7.857,95.025,130.614)
C1': (9.756,93.704,131.095)
C5': (7.195,95.240,133.086)
O4': (9.220,94.179,132.313)
C8: (8.284,91.619,131.117)
O2': (10.027,95.589,129.636)
C6: (10.453,88.945,130.381)
C5: (9.714,90.110,130.669)
C4: (10.414,91.302,130.712)
P: (5.522,93.511,134.195)
C4': (8.295,95.266,132.049)
C2': (9.143,94.534,129.964)
C2: (12.324,90.305,130.253)
N1: (11.782,89.081,130.173)
N3: (11.735,91.471,130.515)
N6: (9.919,87.722,130.301)
N7: (8.368,90.324,130.930)
N9: (9.484,92.274,130.989)
O5': (6.476,93.990,133.012)
O3': (7.388,96.223,130.000)
Image (generated by PyMOL):