ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A2690:A2741

Extra

PDB:
ATOM 1 O3' C A2689 30.436 185.405 130.392 1.00 82.57 O
ATOM 2 P G A2690 32.003 185.691 130.635 1.00 80.16 P
ATOM 3 OP1 G A2690 32.427 184.866 131.797 1.00 79.40 O
ATOM 4 OP2 G A2690 32.235 187.156 130.650 1.00 79.94 O
ATOM 5 O5' G A2690 32.717 185.107 129.337 1.00 79.32 O
ATOM 6 C5' G A2690 32.859 183.683 129.134 1.00 75.96 C
ATOM 7 C4' G A2690 33.980 183.416 128.160 1.00 73.39 C
ATOM 8 O4' G A2690 33.755 184.258 126.993 1.00 72.99 O
ATOM 9 C3' G A2690 35.384 183.797 128.625 1.00 72.01 C
ATOM 10 O3' G A2690 35.988 182.755 129.427 1.00 70.18 O
ATOM 11 C2' G A2690 36.105 184.013 127.293 1.00 72.24 C
ATOM 12 O2' G A2690 36.485 182.799 126.677 1.00 72.71 O
ATOM 13 C1' G A2690 35.005 184.659 126.437 1.00 72.26 C
ATOM 14 N9 G A2690 35.046 186.123 126.369 1.00 71.30 N
ATOM 15 C8 G A2690 34.634 186.997 127.342 1.00 70.68 C
ATOM 16 N7 G A2690 34.800 188.248 127.013 1.00 70.34 N
ATOM 17 C5 G A2690 35.352 188.208 125.742 1.00 70.00 C
ATOM 18 C6 G A2690 35.748 189.270 124.875 1.00 69.37 C
ATOM 19 O6 G A2690 35.681 190.488 125.060 1.00 68.24 O
ATOM 20 N1 G A2690 36.264 188.790 123.683 1.00 69.81 N
ATOM 21 C2 G A2690 36.384 187.464 123.354 1.00 71.21 C
ATOM 22 N2 G A2690 36.910 187.215 122.143 1.00 71.65 N
ATOM 23 N3 G A2690 36.016 186.461 124.149 1.00 71.38 N
ATOM 24 C4 G A2690 35.512 186.905 125.321 1.00 70.76 C
ATOM 25 P A A2691 37.074 183.116 130.582 1.00 68.13 P
ATOM 26 OP1 A A2691 37.217 181.940 131.472 1.00 67.71 O
ATOM 27 OP2 A A2691 36.739 184.434 131.166 1.00 68.40 O
ATOM 28 O5' A A2691 38.456 183.244 129.806 1.00 66.87 O
TER

ATOM 1 O3' C B2740 42.977 194.510 129.149 1.00 73.30 O
ATOM 2 P A B2741 41.404 194.289 129.085 1.00 72.12 P
ATOM 3 OP1 A B2741 40.846 195.654 129.183 1.00 72.38 O
ATOM 4 OP2 A B2741 41.020 193.254 130.077 1.00 71.58 O
ATOM 5 O5' A B2741 41.149 193.705 127.631 1.00 71.74 O
ATOM 6 C5' A B2741 39.848 193.767 127.054 1.00 72.42 C
ATOM 7 C4' A B2741 39.951 193.675 125.556 1.00 73.18 C
ATOM 8 O4' A B2741 40.451 192.359 125.203 1.00 72.99 O
ATOM 9 C3' A B2741 38.635 193.845 124.798 1.00 73.10 C
ATOM 10 O3' A B2741 38.924 194.380 123.511 1.00 72.82 O
ATOM 11 C2' A B2741 38.177 192.410 124.610 1.00 73.11 C
ATOM 12 O2' A B2741 37.323 192.282 123.492 1.00 72.70 O
ATOM 13 C1' A B2741 39.518 191.724 124.361 1.00 72.77 C
ATOM 14 N9 A B2741 39.530 190.293 124.632 1.00 72.29 N
ATOM 15 C8 A B2741 39.975 189.341 123.761 1.00 71.63 C
ATOM 16 N7 A B2741 39.836 188.118 124.197 1.00 70.90 N
ATOM 17 C5 A B2741 39.274 188.273 125.453 1.00 70.91 C
ATOM 18 C6 A B2741 38.869 187.341 126.419 1.00 70.54 C
ATOM 19 N6 A B2741 38.972 186.022 126.257 1.00 69.87 N
ATOM 20 N1 A B2741 38.343 187.814 127.566 1.00 70.01 N
ATOM 21 C2 A B2741 38.230 189.138 127.713 1.00 71.01 C
ATOM 22 N3 A B2741 38.568 190.117 126.869 1.00 71.47 N
ATOM 23 C4 A B2741 39.092 189.609 125.743 1.00 71.60 C
ATOM 24 P C B2742 39.312 195.924 123.360 1.00 71.28 P
ATOM 25 OP1 C B2742 39.777 196.421 124.671 1.00 72.02 O
ATOM 26 OP2 C B2742 38.225 196.635 122.634 1.00 70.52 O
ATOM 27 O5' C B2742 40.582 195.909 122.421 1.00 71.15 O
TER

Atoms:
OP1: (32.427,184.866,131.797)
OP2: (32.235,187.156,130.650)
C3': (35.384,183.797,128.625)
C1': (35.005,184.659,126.437)
C5': (32.859,183.683,129.134)
O6: (35.681,190.488,125.060)
O4': (33.755,184.258,126.993)
C8: (34.634,186.997,127.342)
C2: (36.384,187.464,123.354)
C6: (35.748,189.270,124.875)
C5: (35.352,188.208,125.742)
C4: (35.512,186.905,125.321)
P: (32.003,185.691,130.635)
C4': (33.980,183.416,128.160)
C2': (36.105,184.013,127.293)
O2': (36.485,182.799,126.677)
N1: (36.264,188.790,123.683)
N2: (36.910,187.215,122.143)
N3: (36.016,186.461,124.149)
N7: (34.800,188.248,127.013)
N9: (35.046,186.123,126.369)
O5': (32.717,185.107,129.337)
O3': (35.988,182.755,129.427)
OP1: (40.846,195.654,129.183)
OP2: (41.020,193.254,130.077)
C3': (38.635,193.845,124.798)
C1': (39.518,191.724,124.361)
C5': (39.848,193.767,127.054)
O4': (40.451,192.359,125.203)
C8: (39.975,189.341,123.761)
O2': (37.323,192.282,123.492)
C6: (38.869,187.341,126.419)
C5: (39.274,188.273,125.453)
C4: (39.092,189.609,125.743)
P: (41.404,194.289,129.085)
C4': (39.951,193.675,125.556)
C2': (38.177,192.410,124.610)
C2: (38.230,189.138,127.713)
N1: (38.343,187.814,127.566)
N3: (38.568,190.117,126.869)
N6: (38.972,186.022,126.257)
N7: (39.836,188.118,124.197)
N9: (39.530,190.293,124.632)
O5': (41.149,193.705,127.631)
O3': (38.924,194.380,123.511)
Image (generated by PyMOL):
PyMOL image
show in jmol