ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A841:A587

Extra

PDB:
ATOM 1 O3' A A 840 -57.869 145.551 184.595 1.00 55.40 O
ATOM 2 P A A 841 -58.348 144.331 183.682 1.00 41.71 P
ATOM 3 OP1 A A 841 -59.428 144.838 182.797 1.00 43.86 O
ATOM 4 OP2 A A 841 -58.559 143.145 184.541 1.00 54.37 O
ATOM 5 O5' A A 841 -57.065 144.084 182.770 1.00 51.02 O
ATOM 6 C5' A A 841 -57.212 143.615 181.459 1.00 55.02 C
ATOM 7 C4' A A 841 -55.820 143.370 180.942 1.00 41.73 C
ATOM 8 O4' A A 841 -54.919 143.552 182.056 1.00 41.25 O
ATOM 9 C3' A A 841 -55.575 141.938 180.510 1.00 48.09 C
ATOM 10 O3' A A 841 -56.063 141.736 179.181 1.00 45.71 O
ATOM 11 C2' A A 841 -54.066 141.828 180.668 1.00 47.62 C
ATOM 12 O2' A A 841 -53.419 142.466 179.586 1.00 60.60 O
ATOM 13 C1' A A 841 -53.856 142.618 181.960 1.00 47.73 C
ATOM 14 N9 A A 841 -53.823 141.851 183.203 1.00 42.24 N
ATOM 15 C8 A A 841 -54.746 141.849 184.204 1.00 47.10 C
ATOM 16 N7 A A 841 -54.440 141.079 185.221 1.00 44.06 N
ATOM 17 C5 A A 841 -53.227 140.543 184.864 1.00 42.36 C
ATOM 18 C6 A A 841 -52.366 139.645 185.514 1.00 48.46 C
ATOM 19 N6 A A 841 -52.613 139.107 186.704 1.00 54.42 N
ATOM 20 N1 A A 841 -51.227 139.308 184.895 1.00 53.19 N
ATOM 21 C2 A A 841 -50.988 139.857 183.698 1.00 52.77 C
ATOM 22 N3 A A 841 -51.717 140.715 182.979 1.00 45.13 N
ATOM 23 C4 A A 841 -52.836 141.013 183.629 1.00 41.67 C
ATOM 24 P U A 842 -57.561 141.152 179.087 1.00 43.56 P
ATOM 25 OP1 U A 842 -57.835 140.399 180.337 1.00 54.02 O
ATOM 26 OP2 U A 842 -57.770 140.496 177.776 1.00 45.48 O
ATOM 27 O5' U A 842 -58.415 142.501 179.129 1.00 52.29 O
TER

ATOM 1 O3' U B 586 -46.100 136.375 181.866 1.00 40.74 O
ATOM 2 P U B 587 -47.528 137.108 181.893 1.00 42.58 P
ATOM 3 OP1 U B 587 -47.995 137.268 180.492 1.00 45.63 O
ATOM 4 OP2 U B 587 -47.413 138.271 182.804 1.00 53.12 O
ATOM 5 O5' U B 587 -48.449 136.054 182.674 1.00 47.13 O
ATOM 6 C5' U B 587 -49.613 136.509 183.368 1.00 51.72 C
ATOM 7 C4' U B 587 -50.353 135.371 184.050 1.00 44.14 C
ATOM 8 O4' U B 587 -50.873 134.462 183.052 1.00 39.69 O
ATOM 9 C3' U B 587 -49.478 134.523 184.960 1.00 40.53 C
ATOM 10 O3' U B 587 -49.462 135.068 186.264 1.00 36.13 O
ATOM 11 C2' U B 587 -50.155 133.158 184.922 1.00 44.88 C
ATOM 12 O2' U B 587 -51.138 133.006 185.921 1.00 39.60 O
ATOM 13 C1' U B 587 -50.802 133.132 183.536 1.00 45.56 C
ATOM 14 N1 U B 587 -50.044 132.316 182.539 1.00 47.20 N
ATOM 15 C2 U B 587 -49.988 130.950 182.688 1.00 47.46 C
ATOM 16 O2 U B 587 -50.533 130.358 183.605 1.00 51.11 O
ATOM 17 N3 U B 587 -49.267 130.304 181.719 1.00 51.63 N
ATOM 18 C4 U B 587 -48.616 130.875 180.645 1.00 51.45 C
ATOM 19 O4 U B 587 -48.004 130.169 179.849 1.00 52.52 O
ATOM 20 C5 U B 587 -48.723 132.306 180.561 1.00 56.35 C
ATOM 21 C6 U B 587 -49.417 132.957 181.493 1.00 57.31 C
ATOM 22 P G B 588 -48.037 135.297 186.969 1.00 39.78 P
ATOM 23 OP1 G B 588 -48.207 136.027 188.249 1.00 46.55 O
ATOM 24 OP2 G B 588 -47.134 135.856 185.933 1.00 55.57 O
ATOM 25 O5' G B 588 -47.589 133.802 187.312 1.00 34.10 O
TER

Atoms:
OP1: (-59.428,144.838,182.797)
OP2: (-58.559,143.145,184.541)
C3': (-55.575,141.938,180.510)
C1': (-53.856,142.618,181.960)
C5': (-57.212,143.615,181.459)
O4': (-54.919,143.552,182.056)
C8: (-54.746,141.849,184.204)
O2': (-53.419,142.466,179.586)
C6: (-52.366,139.645,185.514)
C5: (-53.227,140.543,184.864)
C4: (-52.836,141.013,183.629)
P: (-58.348,144.331,183.682)
C4': (-55.820,143.370,180.942)
C2': (-54.066,141.828,180.668)
C2: (-50.988,139.857,183.698)
N1: (-51.227,139.308,184.895)
N3: (-51.717,140.715,182.979)
N6: (-52.613,139.107,186.704)
N7: (-54.440,141.079,185.221)
N9: (-53.823,141.851,183.203)
O5': (-57.065,144.084,182.770)
O3': (-56.063,141.736,179.181)
C4: (-48.616,130.875,180.645)
N3: (-49.267,130.304,181.719)
OP1: (-47.995,137.268,180.492)
OP2: (-47.413,138.271,182.804)
C2: (-49.988,130.950,182.688)
C1': (-50.802,133.132,183.536)
C3': (-49.478,134.523,184.960)
O5': (-48.449,136.054,182.674)
O4': (-50.873,134.462,183.052)
C5': (-49.613,136.509,183.368)
P: (-47.528,137.108,181.893)
C4': (-50.353,135.371,184.050)
C2': (-50.155,133.158,184.922)
O2': (-51.138,133.006,185.921)
N1: (-50.044,132.316,182.539)
O4: (-48.004,130.169,179.849)
O2: (-50.533,130.358,183.605)
C6: (-49.417,132.957,181.493)
C5: (-48.723,132.306,180.561)
O3': (-49.462,135.068,186.264)
Image (generated by PyMOL):
PyMOL image
show in jmol