Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:079:080
Extra
PDB:
ATOM 1 O3' G A 78 33.504 167.933 45.251 1.00 69.54 O
ATOM 2 P G A 79 33.055 168.991 44.125 1.00 71.46 P
ATOM 3 OP1 G A 79 31.769 169.565 44.609 1.00 70.91 O
ATOM 4 OP2 G A 79 33.119 168.330 42.788 1.00 70.20 O
ATOM 5 O5' G A 79 34.168 170.131 44.165 1.00 68.59 O
ATOM 6 C5' G A 79 34.157 171.149 45.179 1.00 66.01 C
ATOM 7 C4' G A 79 35.342 172.066 45.000 1.00 66.26 C
ATOM 8 O4' G A 79 36.564 171.284 45.118 1.00 65.19 O
ATOM 9 C3' G A 79 35.472 172.713 43.629 1.00 66.46 C
ATOM 10 O3' G A 79 34.650 173.861 43.460 1.00 67.53 O
ATOM 11 C2' G A 79 36.958 173.039 43.566 1.00 65.55 C
ATOM 12 O2' G A 79 37.327 174.194 44.298 1.00 65.96 O
ATOM 13 C1' G A 79 37.548 171.795 44.228 1.00 62.60 C
ATOM 14 N9 G A 79 37.874 170.764 43.246 1.00 57.78 N
ATOM 15 C8 G A 79 37.106 169.687 42.861 1.00 56.37 C
ATOM 16 N7 G A 79 37.693 168.934 41.969 1.00 54.78 N
ATOM 17 C5 G A 79 38.917 169.554 41.753 1.00 53.73 C
ATOM 18 C6 G A 79 39.996 169.193 40.907 1.00 52.76 C
ATOM 19 O6 G A 79 40.092 168.221 40.154 1.00 52.88 O
ATOM 20 N1 G A 79 41.042 170.100 40.999 1.00 52.67 N
ATOM 21 C2 G A 79 41.050 171.216 41.796 1.00 54.22 C
ATOM 22 N2 G A 79 42.139 171.984 41.732 1.00 54.26 N
ATOM 23 N3 G A 79 40.059 171.558 42.593 1.00 54.50 N
ATOM 24 C4 G A 79 39.035 170.689 42.524 1.00 54.62 C
ATOM 25 P A A 80 34.017 174.174 42.015 1.00 68.83 P
ATOM 26 OP1 A A 80 33.122 175.347 42.196 1.00 68.89 O
ATOM 27 OP2 A A 80 33.471 172.906 41.458 1.00 67.11 O
ATOM 28 O5' A A 80 35.257 174.610 41.110 1.00 66.69 O
TER
ATOM 1 O3' G B 79 34.650 173.861 43.460 1.00 67.53 O
ATOM 2 P A B 80 34.017 174.174 42.015 1.00 68.83 P
ATOM 3 OP1 A B 80 33.122 175.347 42.196 1.00 68.89 O
ATOM 4 OP2 A B 80 33.471 172.906 41.458 1.00 67.11 O
ATOM 5 O5' A B 80 35.257 174.610 41.110 1.00 66.69 O
ATOM 6 C5' A B 80 35.987 175.816 41.392 1.00 65.09 C
ATOM 7 C4' A B 80 37.276 175.862 40.597 1.00 65.44 C
ATOM 8 O4' A B 80 38.113 174.720 40.936 1.00 64.15 O
ATOM 9 C3' A B 80 37.186 175.759 39.083 1.00 65.59 C
ATOM 10 O3' A B 80 36.778 176.963 38.451 1.00 67.24 O
ATOM 11 C2' A B 80 38.623 175.407 38.726 1.00 64.09 C
ATOM 12 O2' A B 80 39.501 176.515 38.802 1.00 65.76 O
ATOM 13 C1' A B 80 38.963 174.412 39.835 1.00 61.22 C
ATOM 14 N9 A B 80 38.698 173.046 39.378 1.00 56.80 N
ATOM 15 C8 A B 80 37.554 172.292 39.515 1.00 55.04 C
ATOM 16 N7 A B 80 37.614 171.127 38.913 1.00 52.53 N
ATOM 17 C5 A B 80 38.886 171.105 38.357 1.00 51.41 C
ATOM 18 C6 A B 80 39.560 170.151 37.580 1.00 50.18 C
ATOM 19 N6 A B 80 39.013 168.996 37.191 1.00 50.98 N
ATOM 20 N1 A B 80 40.826 170.429 37.200 1.00 49.43 N
ATOM 21 C2 A B 80 41.364 171.597 37.573 1.00 50.03 C
ATOM 22 N3 A B 80 40.830 172.579 38.291 1.00 50.28 N
ATOM 23 C4 A B 80 39.573 172.269 38.656 1.00 52.90 C
ATOM 24 P G B 81 35.951 176.892 37.072 1.00 69.27 P
ATOM 25 OP1 G B 81 35.753 178.299 36.636 1.00 69.98 O
ATOM 26 OP2 G B 81 34.768 176.007 37.272 1.00 67.68 O
ATOM 27 O5' G B 81 36.935 176.178 36.037 1.00 64.90 O
TER
ATOM 2 P G A 79 33.055 168.991 44.125 1.00 71.46 P
ATOM 3 OP1 G A 79 31.769 169.565 44.609 1.00 70.91 O
ATOM 4 OP2 G A 79 33.119 168.330 42.788 1.00 70.20 O
ATOM 5 O5' G A 79 34.168 170.131 44.165 1.00 68.59 O
ATOM 6 C5' G A 79 34.157 171.149 45.179 1.00 66.01 C
ATOM 7 C4' G A 79 35.342 172.066 45.000 1.00 66.26 C
ATOM 8 O4' G A 79 36.564 171.284 45.118 1.00 65.19 O
ATOM 9 C3' G A 79 35.472 172.713 43.629 1.00 66.46 C
ATOM 10 O3' G A 79 34.650 173.861 43.460 1.00 67.53 O
ATOM 11 C2' G A 79 36.958 173.039 43.566 1.00 65.55 C
ATOM 12 O2' G A 79 37.327 174.194 44.298 1.00 65.96 O
ATOM 13 C1' G A 79 37.548 171.795 44.228 1.00 62.60 C
ATOM 14 N9 G A 79 37.874 170.764 43.246 1.00 57.78 N
ATOM 15 C8 G A 79 37.106 169.687 42.861 1.00 56.37 C
ATOM 16 N7 G A 79 37.693 168.934 41.969 1.00 54.78 N
ATOM 17 C5 G A 79 38.917 169.554 41.753 1.00 53.73 C
ATOM 18 C6 G A 79 39.996 169.193 40.907 1.00 52.76 C
ATOM 19 O6 G A 79 40.092 168.221 40.154 1.00 52.88 O
ATOM 20 N1 G A 79 41.042 170.100 40.999 1.00 52.67 N
ATOM 21 C2 G A 79 41.050 171.216 41.796 1.00 54.22 C
ATOM 22 N2 G A 79 42.139 171.984 41.732 1.00 54.26 N
ATOM 23 N3 G A 79 40.059 171.558 42.593 1.00 54.50 N
ATOM 24 C4 G A 79 39.035 170.689 42.524 1.00 54.62 C
ATOM 25 P A A 80 34.017 174.174 42.015 1.00 68.83 P
ATOM 26 OP1 A A 80 33.122 175.347 42.196 1.00 68.89 O
ATOM 27 OP2 A A 80 33.471 172.906 41.458 1.00 67.11 O
ATOM 28 O5' A A 80 35.257 174.610 41.110 1.00 66.69 O
TER
ATOM 1 O3' G B 79 34.650 173.861 43.460 1.00 67.53 O
ATOM 2 P A B 80 34.017 174.174 42.015 1.00 68.83 P
ATOM 3 OP1 A B 80 33.122 175.347 42.196 1.00 68.89 O
ATOM 4 OP2 A B 80 33.471 172.906 41.458 1.00 67.11 O
ATOM 5 O5' A B 80 35.257 174.610 41.110 1.00 66.69 O
ATOM 6 C5' A B 80 35.987 175.816 41.392 1.00 65.09 C
ATOM 7 C4' A B 80 37.276 175.862 40.597 1.00 65.44 C
ATOM 8 O4' A B 80 38.113 174.720 40.936 1.00 64.15 O
ATOM 9 C3' A B 80 37.186 175.759 39.083 1.00 65.59 C
ATOM 10 O3' A B 80 36.778 176.963 38.451 1.00 67.24 O
ATOM 11 C2' A B 80 38.623 175.407 38.726 1.00 64.09 C
ATOM 12 O2' A B 80 39.501 176.515 38.802 1.00 65.76 O
ATOM 13 C1' A B 80 38.963 174.412 39.835 1.00 61.22 C
ATOM 14 N9 A B 80 38.698 173.046 39.378 1.00 56.80 N
ATOM 15 C8 A B 80 37.554 172.292 39.515 1.00 55.04 C
ATOM 16 N7 A B 80 37.614 171.127 38.913 1.00 52.53 N
ATOM 17 C5 A B 80 38.886 171.105 38.357 1.00 51.41 C
ATOM 18 C6 A B 80 39.560 170.151 37.580 1.00 50.18 C
ATOM 19 N6 A B 80 39.013 168.996 37.191 1.00 50.98 N
ATOM 20 N1 A B 80 40.826 170.429 37.200 1.00 49.43 N
ATOM 21 C2 A B 80 41.364 171.597 37.573 1.00 50.03 C
ATOM 22 N3 A B 80 40.830 172.579 38.291 1.00 50.28 N
ATOM 23 C4 A B 80 39.573 172.269 38.656 1.00 52.90 C
ATOM 24 P G B 81 35.951 176.892 37.072 1.00 69.27 P
ATOM 25 OP1 G B 81 35.753 178.299 36.636 1.00 69.98 O
ATOM 26 OP2 G B 81 34.768 176.007 37.272 1.00 67.68 O
ATOM 27 O5' G B 81 36.935 176.178 36.037 1.00 64.90 O
TER
Atoms:
OP1: (31.769,169.565,44.609)
OP2: (33.119,168.330,42.788)
C3': (35.472,172.713,43.629)
C1': (37.548,171.795,44.228)
C5': (34.157,171.149,45.179)
O6: (40.092,168.221,40.154)
O4': (36.564,171.284,45.118)
C8: (37.106,169.687,42.861)
C2: (41.050,171.216,41.796)
C6: (39.996,169.193,40.907)
C5: (38.917,169.554,41.753)
C4: (39.035,170.689,42.524)
P: (33.055,168.991,44.125)
C4': (35.342,172.066,45.000)
C2': (36.958,173.039,43.566)
O2': (37.327,174.194,44.298)
N1: (41.042,170.100,40.999)
N2: (42.139,171.984,41.732)
N3: (40.059,171.558,42.593)
N7: (37.693,168.934,41.969)
N9: (37.874,170.764,43.246)
O5': (34.168,170.131,44.165)
O3': (34.650,173.861,43.460)
OP2: (33.119,168.330,42.788)
C3': (35.472,172.713,43.629)
C1': (37.548,171.795,44.228)
C5': (34.157,171.149,45.179)
O6: (40.092,168.221,40.154)
O4': (36.564,171.284,45.118)
C8: (37.106,169.687,42.861)
C2: (41.050,171.216,41.796)
C6: (39.996,169.193,40.907)
C5: (38.917,169.554,41.753)
C4: (39.035,170.689,42.524)
P: (33.055,168.991,44.125)
C4': (35.342,172.066,45.000)
C2': (36.958,173.039,43.566)
O2': (37.327,174.194,44.298)
N1: (41.042,170.100,40.999)
N2: (42.139,171.984,41.732)
N3: (40.059,171.558,42.593)
N7: (37.693,168.934,41.969)
N9: (37.874,170.764,43.246)
O5': (34.168,170.131,44.165)
O3': (34.650,173.861,43.460)
OP1: (33.122,175.347,42.196)
OP2: (33.471,172.906,41.458)
C3': (37.186,175.759,39.083)
C1': (38.963,174.412,39.835)
C5': (35.987,175.816,41.392)
O4': (38.113,174.720,40.936)
C8: (37.554,172.292,39.515)
O2': (39.501,176.515,38.802)
C6: (39.560,170.151,37.580)
C5: (38.886,171.105,38.357)
C4: (39.573,172.269,38.656)
P: (34.017,174.174,42.015)
C4': (37.276,175.862,40.597)
C2': (38.623,175.407,38.726)
C2: (41.364,171.597,37.573)
N1: (40.826,170.429,37.200)
N3: (40.830,172.579,38.291)
N6: (39.013,168.996,37.191)
N7: (37.614,171.127,38.913)
N9: (38.698,173.046,39.378)
O5': (35.257,174.610,41.110)
O3': (36.778,176.963,38.451)
OP2: (33.471,172.906,41.458)
C3': (37.186,175.759,39.083)
C1': (38.963,174.412,39.835)
C5': (35.987,175.816,41.392)
O4': (38.113,174.720,40.936)
C8: (37.554,172.292,39.515)
O2': (39.501,176.515,38.802)
C6: (39.560,170.151,37.580)
C5: (38.886,171.105,38.357)
C4: (39.573,172.269,38.656)
P: (34.017,174.174,42.015)
C4': (37.276,175.862,40.597)
C2': (38.623,175.407,38.726)
C2: (41.364,171.597,37.573)
N1: (40.826,170.429,37.200)
N3: (40.830,172.579,38.291)
N6: (39.013,168.996,37.191)
N7: (37.614,171.127,38.913)
N9: (38.698,173.046,39.378)
O5': (35.257,174.610,41.110)
O3': (36.778,176.963,38.451)
Image (generated by PyMOL):